RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 PCDHB6Q9Y5E3 794 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 RASGRF2O14827 1237 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 SKIP12755 728 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 YY1P25490 414 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 MSH2P43246 934 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 KRT31Q15323 416 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 MMEL1Q495T6 779 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 BBOF1Q8ND07 529 aa11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 KDM5AP29375 1690 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-202ENST00000561623 INHBAP08476 426 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 SLFN14P0C7P3 912 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 GABPAQ06546 454 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 PAGE5Q96GU1 130 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 ZMYND12Q9H0C1 365 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 ZBBXA8MT70 800 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 BCAMP50895 628 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 SGO2Q562F6 1265 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 NUGGCQ68CJ6 796 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 NLRP7Q8WX94 980 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 DHTKD1Q96HY7 919 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 ANAPC5Q9UJX4 755 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 TRIM66O15016 1216 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 SORBS3O60504 671 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 LRRN2O75325 713 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 MYL7Q01449 175 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 CYP4A11Q02928 519 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 ZMYM1Q5SVZ6 1142 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 BEND6Q5SZJ8 279 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 NEK9Q8TD19 979 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 GJB4Q9NTQ9 266 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 ARPP21Q9UBL0 812 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 KLRF2D3W0D1 207 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 ECEL1O95672 775 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 MMEP08473 750 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 LMNB1P20700 586 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 NR2F2P24468 414 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 LRRC47Q8N1G4 583 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 ANKRD35Q8N283 1001 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 FMO2Q99518 471 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 SPZ1Q9BXG8 430 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 PSTPIP2Q9H939 334 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 SPON1Q9HCB6 807 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 KIAA1024Q9UPX6 916 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 ARHGEF10O15013 1369 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 MAST3O60307 1309 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 ZC3H18Q86VM9 953 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 RETREG2Q8NC44 543 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 KCNF1Q9H3M0 494 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 TADA3O75528 432 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 GFPT2O94808 682 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 PRPF6O94906 941 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 ZBED6P86452 979 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 ARHGAP4P98171 946 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 MAN2A1Q16706 1144 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 SAAL1Q96ER3 474 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 PUS3Q9BZE2 481 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 ARHGEF10LQ9HCE6 1279 aa11.09□□□□□ -0.63
GTF3C1-202ENST00000561623 FAM178BQ8IXR5 827 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 DCLK2Q8N568 766 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 LRGUKQ96M69 825 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 ATP8A2Q9NTI2 1148 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 MMP1P03956 469 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 PHEXP78562 749 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 DR1Q01658 176 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 EMBQ6PCB8 327 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 SMYD2Q9NRG4 433 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 C1orf112Q9NSG2 853 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 THEGQ9P2T0 379 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 HDAC6Q9UBN7 1215 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 BICRAQ9NZM4 1560 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 PPFIA2O75334 1257 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 ACSL3O95573 720 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 GYG1P46976 350 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 JADE1Q6IE81 842 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 MB21D1Q8N884 522 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 LARP4BQ92615 738 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 HVCN1Q96D96 273 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 SLAIN2Q9P270 581 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 BZW2Q9Y6E2 419 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 UNC13AQ9UPW8 1703 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 IL1RL1Q01638 556 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 DPF3Q92784 378 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 PPWD1Q96BP3 646 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 DYDC2Q96IM9 177 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 PBKQ96KB5 322 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 ORAI2Q96SN7 254 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 METTL14Q9HCE5 456 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 ZDHHC9Q9Y397 364 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 CASP1P29466 404 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 HADHQ16836 314 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 PROSER3Q2NL68 480 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 DACT3Q96B18 629 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 MAST1Q9Y2H9 1570 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 CTTNBP2Q8WZ74 1663 aa11.08□□□□□ -0.64
GTF3C1-202ENST00000561623 DDAH1O94760 285 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 STMN1P16949 149 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 CTSWP56202 376 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 TBC1D10BQ4KMP7 808 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 ZNF653Q96CK0 615 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms