RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 AFG1LQ8WV93 481 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 DHX38Q92620 1227 aaKnown RBP9.82□□□□□ -0.84
PALB2-202ENST00000561514 ZSCAN10Q96SZ4 725 aaPredicted RBP9.82□□□□□ -0.84
PALB2-202ENST00000561514 UHRF1Q96T88 793 aaPredicted RBP9.82□□□□□ -0.84
PALB2-202ENST00000561514 LNPKQ9C0E8 428 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 CPVLQ9H3G5 476 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 MTCH2Q9Y6C9 303 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 MYO9BQ13459 2157 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 PIEZO1Q92508 2521 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 PRRC2BQ5JSZ5 2229 aaKnown RBP9.81□□□□□ -0.84
PALB2-202ENST00000561514 ZNF213O14771 459 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 KDM4AO75164 1064 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 GOLGA8HP0CJ92 632 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 BMP1P13497 986 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 IGFBP4P22692 258 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 HOXC8P31273 242 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 NUCB1Q02818 461 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 STXBP2Q15833 593 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 TRIM71Q2Q1W2 868 aaKnown RBP9.81□□□□□ -0.84
PALB2-202ENST00000561514 TRAF7Q6Q0C0 670 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 DEFB128Q7Z7B8 93 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 CHD1LQ86WJ1 897 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 SAMD3Q8N6K7 520 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 CCDC155Q8N6L0 562 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 RETREG2Q8NC44 543 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 TBC1D5Q92609 795 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 TAAR1Q96RJ0 339 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 UBA5Q9GZZ9 404 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 JMJD4Q9H9V9 463 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
PALB2-202ENST00000561514 GTF2IRD1Q9UHL9 959 aa9.81□□□□□ -0.84
PALB2-202ENST00000561514 DDX41Q9UJV9 622 aaKnown RBP9.81□□□□□ -0.84
PALB2-202ENST00000561514 MRPL11Q9Y3B7 192 aaKnown RBP9.81□□□□□ -0.84
PALB2-202ENST00000561514 HIP1O00291 1037 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 LPXNO60711 386 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 EIF3JO75822 258 aaKnown RBP9.8□□□□□ -0.84
PALB2-202ENST00000561514 RGS20O76081 388 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 SELPP16109 830 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 WDR5P61964 334 aaKnown RBP9.8□□□□□ -0.84
PALB2-202ENST00000561514 PTGISQ16647 500 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 LY6KQ17RY6 165 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 USH1GQ495M9 461 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 FAM47CQ5HY64 1035 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 GDF6Q6KF10 455 aaPredicted RBP9.8□□□□□ -0.84
PALB2-202ENST00000561514 STOX1Q6ZVD7 989 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 PPTC7Q8NI37 304 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 PPM1EQ8WY54 764 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 CCDC136Q96JN2 1154 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 RMDN3Q96TC7 470 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 ZKSCAN3Q9BRR0 538 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 TSPYL2Q9H2G4 693 aaPredicted RBP9.8□□□□□ -0.84
PALB2-202ENST00000561514 KAT14Q9H8E8 782 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 PXMP2Q9NR77 195 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 MAP3K20Q9NYL2 800 aaKnown RBP9.8□□□□□ -0.84
PALB2-202ENST00000561514 ZSWIM5Q9P217 1185 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 TANC1Q9C0D5 1861 aa9.8□□□□□ -0.84
PALB2-202ENST00000561514 TRIM6-TRIM34B2RNG4 842 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 B4E1Z4 1266 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 PPP1R11O60927 126 aaPredicted RBP9.79□□□□□ -0.84
PALB2-202ENST00000561514 NBNO60934 754 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 NR3C2P08235 984 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 PARP1P09874 1014 aaKnown RBP9.79□□□□□ -0.84
PALB2-202ENST00000561514 PDIA4P13667 645 aaKnown RBP9.79□□□□□ -0.84
PALB2-202ENST00000561514 CASTP20810 708 aaKnown RBP9.79□□□□□ -0.84
PALB2-202ENST00000561514 PDE4CQ08493 712 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 PTK7Q13308 1070 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 LAMC2Q13753 1193 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 SEC23AQ15436 765 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 CCDC85BQ15834 202 aaPredicted RBP9.79□□□□□ -0.84
PALB2-202ENST00000561514 DGKDQ16760 1214 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 AAK1Q2M2I8 961 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 SLC35G1Q2M3R5 365 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 CNKSR3Q6P9H4 555 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 LRRC8DQ7L1W4 858 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 FBXO11Q86XK2 927 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 RILPL2Q969X0 211 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 PDCD2LQ9BRP1 358 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 KATNAL1Q9BW62 490 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 KRT23Q9C075 422 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 IL25Q9H293 177 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 RWDD1Q9H446 243 aaPredicted RBP9.79□□□□□ -0.84
PALB2-202ENST00000561514 CNNM2Q9H8M5 875 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 LMCD1Q9NZU5 365 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 COG5Q9UP83 839 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 BRWD1Q9NSI6 2320 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 FRMPD4Q14CM0 1322 aa9.79□□□□□ -0.84
PALB2-202ENST00000561514 LAMA4Q16363 1823 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 ABHD14A-ACY1A0A1B0GW23 586 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 PALM3A6NDB9 673 aaPredicted RBP9.78□□□□□ -0.84
PALB2-202ENST00000561514 KIF28PB7ZC32 967 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 ZBTB5O15062 677 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 GTPBP6O43824 516 aaPredicted RBP9.78□□□□□ -0.84
PALB2-202ENST00000561514 EFCAB14O75071 495 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 GJB5O95377 273 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 IGHDP01880 384 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 CKBP12277 381 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 EIF2AK2P19525 551 aaKnown RBP9.78□□□□□ -0.84
PALB2-202ENST00000561514 PSEN2P49810 448 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 TFF2Q03403 129 aa9.78□□□□□ -0.84
PALB2-202ENST00000561514 GRB10Q13322 594 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms