RNA–Protein interactions for RNA: ENST00000560828.5

CPNE6-217, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-217ENST00000560828 POLR2MP0CAP2 368 aa19.52■□□□□ 0.72
CPNE6-217ENST00000560828 DNAJB2P25686 324 aa19.52■□□□□ 0.72
CPNE6-217ENST00000560828 HOXA13P31271 388 aaPredicted RBP19.52■□□□□ 0.72
CPNE6-217ENST00000560828 CCL23P55773 120 aa19.52■□□□□ 0.72
CPNE6-217ENST00000560828 FAM47CQ5HY64 1035 aa19.52■□□□□ 0.72
CPNE6-217ENST00000560828 HERVK_113Q902F9 699 aa19.52■□□□□ 0.72
CPNE6-217ENST00000560828 CDX2Q99626 313 aaPredicted RBP19.52■□□□□ 0.72
CPNE6-217ENST00000560828 SPZ1Q9BXG8 430 aa19.52■□□□□ 0.72
CPNE6-217ENST00000560828 MTIF3Q9H2K0 278 aaKnown RBP19.52■□□□□ 0.72
CPNE6-217ENST00000560828 ANO2Q9NQ90 1003 aa19.52■□□□□ 0.72
CPNE6-217ENST00000560828 MRVI1Q9Y6F6 885 aa19.52■□□□□ 0.72
CPNE6-217ENST00000560828 SH2B2O14492 632 aaPredicted RBP19.51■□□□□ 0.71
CPNE6-217ENST00000560828 FGBP02675 491 aa19.51■□□□□ 0.71
CPNE6-217ENST00000560828 SMARCA1P28370 1054 aa19.51■□□□□ 0.71
CPNE6-217ENST00000560828 PGM5Q15124 567 aa19.51■□□□□ 0.71
CPNE6-217ENST00000560828 NECTIN1Q15223 517 aa19.51■□□□□ 0.71
CPNE6-217ENST00000560828 CREB3L3Q68CJ9 461 aa19.51■□□□□ 0.71
CPNE6-217ENST00000560828 KCNV1Q6PIU1 500 aa19.51■□□□□ 0.71
CPNE6-217ENST00000560828 VSIG10LQ86VR7 867 aa19.51■□□□□ 0.71
CPNE6-217ENST00000560828 LZTS2Q9BRK4 669 aa19.51■□□□□ 0.71
CPNE6-217ENST00000560828 RGS20O76081 388 aa19.5■□□□□ 0.71
CPNE6-217ENST00000560828 CYP2C9P11712 490 aa19.5■□□□□ 0.71
CPNE6-217ENST00000560828 MYCLP12524 364 aaPredicted RBP19.5■□□□□ 0.71
CPNE6-217ENST00000560828 CASTP20810 708 aaKnown RBP19.5■□□□□ 0.71
CPNE6-217ENST00000560828 LAMC2Q13753 1193 aa19.5■□□□□ 0.71
CPNE6-217ENST00000560828 DGKDQ16760 1214 aa19.5■□□□□ 0.71
CPNE6-217ENST00000560828 NFXL1Q6ZNB6 911 aa19.5■□□□□ 0.71
CPNE6-217ENST00000560828 RPUSD2Q8IZ73 545 aaKnown RBP19.5■□□□□ 0.71
CPNE6-217ENST00000560828 PPTC7Q8NI37 304 aa19.5■□□□□ 0.71
CPNE6-217ENST00000560828 RRP36Q96EU6 259 aaKnown RBP19.5■□□□□ 0.71
CPNE6-217ENST00000560828 MYL10Q9BUA6 226 aa19.5■□□□□ 0.71
CPNE6-217ENST00000560828 CCDC69A6NI79 296 aa19.49■□□□□ 0.71
CPNE6-217ENST00000560828 PITPNM1O00562 1244 aa19.49■□□□□ 0.71
CPNE6-217ENST00000560828 PFKMP08237 780 aa19.49■□□□□ 0.71
CPNE6-217ENST00000560828 CALM1P0DP23 149 aa19.49■□□□□ 0.71
CPNE6-217ENST00000560828 CALM2P0DP24 149 aa19.49■□□□□ 0.71
CPNE6-217ENST00000560828 CALM3P0DP25 149 aa19.49■□□□□ 0.71
CPNE6-217ENST00000560828 CCND2P30279 289 aa19.49■□□□□ 0.71
CPNE6-217ENST00000560828 LIFRP42702 1097 aa19.49■□□□□ 0.71
CPNE6-217ENST00000560828 GNAQP50148 359 aa19.49■□□□□ 0.71
CPNE6-217ENST00000560828 SESTD1Q86VW0 696 aa19.49■□□□□ 0.71
CPNE6-217ENST00000560828 TGFB3P10600 412 aa19.48■□□□□ 0.71
CPNE6-217ENST00000560828 RNF20Q5VTR2 975 aa19.48■□□□□ 0.71
CPNE6-217ENST00000560828 FCHSD1Q86WN1 690 aa19.48■□□□□ 0.71
CPNE6-217ENST00000560828 DHX37Q8IY37 1157 aaKnown RBP19.48■□□□□ 0.71
CPNE6-217ENST00000560828 IL31RAQ8NI17 732 aa19.48■□□□□ 0.71
CPNE6-217ENST00000560828 KAT2BQ92831 832 aa19.48■□□□□ 0.71
CPNE6-217ENST00000560828 TIFAQ96CG3 184 aa19.48■□□□□ 0.71
CPNE6-217ENST00000560828 SCLYQ96I15 445 aa19.48■□□□□ 0.71
CPNE6-217ENST00000560828 SEC63Q9UGP8 760 aaKnown RBP19.48■□□□□ 0.71
CPNE6-217ENST00000560828 NOD1Q9Y239 953 aa19.48■□□□□ 0.71
CPNE6-217ENST00000560828 FRMPD4Q14CM0 1322 aa19.48■□□□□ 0.71
CPNE6-217ENST00000560828 SCN10AQ9Y5Y9 1956 aa19.47■□□□□ 0.71
CPNE6-217ENST00000560828 RFC2P35250 354 aa19.47■□□□□ 0.71
CPNE6-217ENST00000560828 COL9A3Q14050 684 aaPredicted RBP19.47■□□□□ 0.71
CPNE6-217ENST00000560828 OTOP2Q7RTS6 562 aa19.47■□□□□ 0.71
CPNE6-217ENST00000560828 SKAP1Q86WV1 359 aa19.47■□□□□ 0.71
CPNE6-217ENST00000560828 PPP1R13LQ8WUF5 828 aa19.47■□□□□ 0.71
CPNE6-217ENST00000560828 PIBF1Q8WXW3 757 aa19.47■□□□□ 0.71
CPNE6-217ENST00000560828 VWCEQ96DN2 955 aa19.47■□□□□ 0.71
CPNE6-217ENST00000560828 KATNAL1Q9BW62 490 aa19.47■□□□□ 0.71
CPNE6-217ENST00000560828 PBX4Q9BYU1 374 aa19.47■□□□□ 0.71
CPNE6-217ENST00000560828 CXXC1Q9P0U4 656 aaPredicted RBP19.47■□□□□ 0.71
CPNE6-217ENST00000560828 SLC12A7Q9Y666 1083 aa19.47■□□□□ 0.71
CPNE6-217ENST00000560828 CDH23Q9H251 3354 aa19.47■□□□□ 0.71
CPNE6-217ENST00000560828 GRXCR1A8MXD5 290 aa19.46■□□□□ 0.71
CPNE6-217ENST00000560828 STAM2O75886 525 aa19.46■□□□□ 0.71
CPNE6-217ENST00000560828 F2P00734 622 aa19.46■□□□□ 0.71
CPNE6-217ENST00000560828 HOXD8P13378 290 aaPredicted RBP19.46■□□□□ 0.71
CPNE6-217ENST00000560828 CHMP4BP1P59074 171 aa19.46■□□□□ 0.71
CPNE6-217ENST00000560828 BFSP2Q13515 415 aa19.46■□□□□ 0.71
CPNE6-217ENST00000560828 RAB30Q15771 203 aa19.46■□□□□ 0.71
CPNE6-217ENST00000560828 PTGISQ16647 500 aa19.46■□□□□ 0.71
CPNE6-217ENST00000560828 CELF3Q5SZQ8 465 aaKnown RBP19.46■□□□□ 0.71
CPNE6-217ENST00000560828 MYSM1Q5VVJ2 828 aa19.46■□□□□ 0.71
CPNE6-217ENST00000560828 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.46■□□□□ 0.71
CPNE6-217ENST00000560828 RETREG2Q8NC44 543 aa19.46■□□□□ 0.71
CPNE6-217ENST00000560828 MYLIPQ8WY64 445 aa19.46■□□□□ 0.71
CPNE6-217ENST00000560828 ZNF576Q9H609 170 aa19.46■□□□□ 0.71
CPNE6-217ENST00000560828 PIK3CDO00329 1044 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 PPFIA4O75335 1185 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 CDC45O75419 566 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 PLEKHA8P1O95397 391 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 GGPS1O95749 300 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 FOSL2P15408 326 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 UBA1P22314 1058 aaKnown RBP19.45■□□□□ 0.7
CPNE6-217ENST00000560828 PBX2P40425 430 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 GNPTABQ3T906 1256 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 SGMS1Q86VZ5 419 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 SRBD1Q8N5C6 995 aaKnown RBP19.45■□□□□ 0.7
CPNE6-217ENST00000560828 CCDC155Q8N6L0 562 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 CAGE1Q8TC20 777 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 CUL5Q93034 780 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 SPATA33Q96N06 139 aa19.45■□□□□ 0.7
CPNE6-217ENST00000560828 COL25A1Q9BXS0 654 aaPredicted RBP19.45■□□□□ 0.7
CPNE6-217ENST00000560828 IQCF3P0C7M6 154 aa19.44■□□□□ 0.7
CPNE6-217ENST00000560828 RXRAP19793 462 aa19.44■□□□□ 0.7
CPNE6-217ENST00000560828 PSEN2P49810 448 aa19.44■□□□□ 0.7
CPNE6-217ENST00000560828 MFSD10Q14728 455 aa19.44■□□□□ 0.7
CPNE6-217ENST00000560828 GRIN2CQ14957 1233 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms