RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TJAP1Q5JTD0 557 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 TTC22Q5TAA0 569 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 ARHGEF16Q5VV41 709 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 PPP2R2DQ66LE6 453 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 USP38Q8NB14 1042 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 VWCEQ96DN2 955 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 TAAR1Q96RJ0 339 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 KATNAL1Q9BW62 490 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 PXMP2Q9NR77 195 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 COL20A1Q9P218 1284 aa15.76■□□□□ 0.11
SMAD3-214ENST00000560402 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
SMAD3-214ENST00000560402 YBX2Q9Y2T7 364 aaKnown RBP15.76■□□□□ 0.11
SMAD3-214ENST00000560402 KLRF2D3W0D1 207 aa15.75■□□□□ 0.11
SMAD3-214ENST00000560402 ZBTB5O15062 677 aa15.75■□□□□ 0.11
SMAD3-214ENST00000560402 EIF3JO75822 258 aaKnown RBP15.75■□□□□ 0.11
SMAD3-214ENST00000560402 BAIAP3O94812 1187 aa15.75■□□□□ 0.11
SMAD3-214ENST00000560402 PARNO95453 639 aaKnown RBP15.75■□□□□ 0.11
SMAD3-214ENST00000560402 CASTP20810 708 aaKnown RBP15.75■□□□□ 0.11
SMAD3-214ENST00000560402 RBL2Q08999 1139 aa15.75■□□□□ 0.11
SMAD3-214ENST00000560402 SEPT14Q6ZU15 432 aa15.75■□□□□ 0.11
SMAD3-214ENST00000560402 PHOSPHO2Q8TCD6 241 aa15.75■□□□□ 0.11
SMAD3-214ENST00000560402 AFAP1L1Q8TED9 768 aa15.75■□□□□ 0.11
SMAD3-214ENST00000560402 AFG1LQ8WV93 481 aa15.75■□□□□ 0.11
SMAD3-214ENST00000560402 TBC1D5Q92609 795 aa15.75■□□□□ 0.11
SMAD3-214ENST00000560402 MTMR8Q96EF0 704 aa15.75■□□□□ 0.11
SMAD3-214ENST00000560402 THEGQ9P2T0 379 aa15.75■□□□□ 0.11
SMAD3-214ENST00000560402 U3KPZ7 1027 aaPredicted RBP15.75■□□□□ 0.11
SMAD3-214ENST00000560402 TET1Q8NFU7 2136 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 PTPRSQ13332 1948 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 TTC28Q96AY4 2481 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 ERICH2A1L162 156 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 CFBP00751 764 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 NR3C2P08235 984 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 IQCF3P0C7M6 154 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 GSPT1P15170 499 aaKnown RBP15.74■□□□□ 0.11
SMAD3-214ENST00000560402 EIF2AK2P19525 551 aaKnown RBP15.74■□□□□ 0.11
SMAD3-214ENST00000560402 PTGISQ16647 500 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 DGKDQ16760 1214 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 LY6KQ17RY6 165 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 KCNV1Q6PIU1 500 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 DEFB128Q7Z7B8 93 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 PPTC7Q8NI37 304 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 ATXN2LQ8WWM7 1075 aaKnown RBP15.74■□□□□ 0.11
SMAD3-214ENST00000560402 IL25Q9H293 177 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 VAT1LQ9HCJ6 419 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 MAD2L2Q9UI95 211 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 MRVI1Q9Y6F6 885 aa15.74■□□□□ 0.11
SMAD3-214ENST00000560402 TRANK1O15050 2925 aa15.73■□□□□ 0.11
SMAD3-214ENST00000560402 PALM3A6NDB9 673 aaPredicted RBP15.73■□□□□ 0.11
SMAD3-214ENST00000560402 F2P00734 622 aa15.73■□□□□ 0.11
SMAD3-214ENST00000560402 LAMC2Q13753 1193 aa15.73■□□□□ 0.11
SMAD3-214ENST00000560402 ADGRE1Q14246 886 aa15.73■□□□□ 0.11
SMAD3-214ENST00000560402 SART3Q15020 963 aaKnown RBP15.73■□□□□ 0.11
SMAD3-214ENST00000560402 TMEM67Q5HYA8 995 aa15.73■□□□□ 0.11
SMAD3-214ENST00000560402 CYB5R4Q7L1T6 521 aa15.73■□□□□ 0.11
SMAD3-214ENST00000560402 RALYLQ86SE5 291 aaKnown RBP15.73■□□□□ 0.11
SMAD3-214ENST00000560402 STAG2Q8N3U4 1231 aa15.73■□□□□ 0.11
SMAD3-214ENST00000560402 PDCD2LQ9BRP1 358 aa15.73■□□□□ 0.11
SMAD3-214ENST00000560402 DDX41Q9UJV9 622 aaKnown RBP15.73■□□□□ 0.11
SMAD3-214ENST00000560402 OPLAHO14841 1288 aa15.72■□□□□ 0.11
SMAD3-214ENST00000560402 HOXD8P13378 290 aaPredicted RBP15.72■□□□□ 0.11
SMAD3-214ENST00000560402 RABGGTBP53611 331 aa15.72■□□□□ 0.11
SMAD3-214ENST00000560402 GRM4Q14833 912 aa15.72■□□□□ 0.11
SMAD3-214ENST00000560402 CASC1Q6TDU7 716 aa15.72■□□□□ 0.11
SMAD3-214ENST00000560402 STOX1Q6ZVD7 989 aa15.72■□□□□ 0.11
SMAD3-214ENST00000560402 KAT2BQ92831 832 aa15.72■□□□□ 0.11
SMAD3-214ENST00000560402 FTOQ9C0B1 505 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMAD3-214ENST00000560402 GTF2IRD1Q9UHL9 959 aa15.72■□□□□ 0.11
SMAD3-214ENST00000560402 PCDHA1Q9Y5I3 950 aa15.72■□□□□ 0.11
SMAD3-214ENST00000560402 COL4A4P53420 1690 aaPredicted RBP15.72■□□□□ 0.11
SMAD3-214ENST00000560402 KIF28PB7ZC32 967 aa15.71■□□□□ 0.11
SMAD3-214ENST00000560402 CYP21A2P08686 494 aa15.71■□□□□ 0.11
SMAD3-214ENST00000560402 SELPP16109 830 aa15.71■□□□□ 0.11
SMAD3-214ENST00000560402 IGFBP4P22692 258 aa15.71■□□□□ 0.11
SMAD3-214ENST00000560402 GDF6Q6KF10 455 aaPredicted RBP15.71■□□□□ 0.11
SMAD3-214ENST00000560402 LRRC8DQ7L1W4 858 aa15.71■□□□□ 0.11
SMAD3-214ENST00000560402 CHST3Q7LGC8 479 aa15.71■□□□□ 0.11
SMAD3-214ENST00000560402 DHX37Q8IY37 1157 aaKnown RBP15.71■□□□□ 0.11
SMAD3-214ENST00000560402 C7orf31Q8N865 590 aa15.71■□□□□ 0.11
SMAD3-214ENST00000560402 NCOA7Q8NI08 942 aa15.71■□□□□ 0.11
SMAD3-214ENST00000560402 TSPYL2Q9H2G4 693 aaPredicted RBP15.71■□□□□ 0.11
SMAD3-214ENST00000560402 RIOX1Q9H6W3 641 aa15.71■□□□□ 0.11
SMAD3-214ENST00000560402 BAZ2BQ9UIF8 2168 aaKnown RBP15.7■□□□□ 0.1
SMAD3-214ENST00000560402 HAS3O00219 553 aa15.7■□□□□ 0.1
SMAD3-214ENST00000560402 IFIT3O14879 490 aaKnown RBP15.7■□□□□ 0.1
SMAD3-214ENST00000560402 PPP1R11O60927 126 aaPredicted RBP15.7■□□□□ 0.1
SMAD3-214ENST00000560402 CA3P07451 260 aa15.7■□□□□ 0.1
SMAD3-214ENST00000560402 TGFB3P10600 412 aa15.7■□□□□ 0.1
SMAD3-214ENST00000560402 CHMLP26374 656 aa15.7■□□□□ 0.1
SMAD3-214ENST00000560402 CCND2P30279 289 aa15.7■□□□□ 0.1
SMAD3-214ENST00000560402 KCNJ6P48051 423 aa15.7■□□□□ 0.1
SMAD3-214ENST00000560402 PSEN2P49810 448 aa15.7■□□□□ 0.1
SMAD3-214ENST00000560402 CHMP4BP1P59074 171 aa15.7■□□□□ 0.1
SMAD3-214ENST00000560402 WTAPQ15007 396 aa15.7■□□□□ 0.1
SMAD3-214ENST00000560402 PGM5Q15124 567 aa15.7■□□□□ 0.1
SMAD3-214ENST00000560402 CTAGE1Q96RT6 745 aa15.7■□□□□ 0.1
SMAD3-214ENST00000560402 FRMPD4Q14CM0 1322 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 GCOM1H8Y6P7 765 aaPredicted RBP15.69■□□□□ 0.1
SMAD3-214ENST00000560402 EFCAB14O75071 495 aa15.69■□□□□ 0.1
SMAD3-214ENST00000560402 STAM2O75886 525 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms