RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 MICALL1Q8N3F8 863 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 AFAP1L1Q8TED9 768 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 TMEM206Q9H813 350 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 PARVGQ9HBI0 331 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 SLC12A6Q9UHW9 1150 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 SPATA31E1Q6ZUB1 1445 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 ADCY8P40145 1251 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 GKAP1Q5VSY0 366 aaPredicted RBP14.68□□□□□ -0.06
TRAF3-208ENST00000560371 B4GALNT4Q76KP1 1039 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 CNOT6LQ96LI5 555 aaKnown RBP14.68□□□□□ -0.06
TRAF3-208ENST00000560371 WRNIP1Q96S55 665 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 HOXC10Q9NYD6 342 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 IPO11Q9UI26 975 aaKnown RBP14.68□□□□□ -0.06
TRAF3-208ENST00000560371 ZHX2Q9Y6X8 837 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 NCAPD2Q15021 1401 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 K7ERI5 159 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 FKBP3Q00688 224 aaKnown RBP14.68□□□□□ -0.06
TRAF3-208ENST00000560371 MTMR3Q13615 1198 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 BBS5Q8N3I7 341 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 GJD4Q96KN9 370 aaPredicted RBP14.68□□□□□ -0.06
TRAF3-208ENST00000560371 TUBGCP2Q9BSJ2 902 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 MINPP1Q9UNW1 487 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 H2AFZP0C0S5 128 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 CACNB3P54284 484 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 CDC37Q16543 378 aaPredicted RBP14.68□□□□□ -0.06
TRAF3-208ENST00000560371 H2AFVQ71UI9 128 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 FAM81BQ96LP2 452 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 ESYT2A0FGR8 921 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 A6NNZ2 444 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 MEIS1O00470 390 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 MYO1EQ12965 1108 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 TUBB8Q3ZCM7 444 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 CEP57Q86XR8 500 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 GSDMAQ96QA5 445 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 OSBPL3Q9H4L5 887 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 COL15A1P39059 1388 aa14.68□□□□□ -0.06
TRAF3-208ENST00000560371 RILPQ96NA2 401 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 TDRD3Q9H7E2 651 aaKnown RBP14.67□□□□□ -0.06
TRAF3-208ENST00000560371 RGS12O14924 1447 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 HOXA13P31271 388 aaPredicted RBP14.67□□□□□ -0.06
TRAF3-208ENST00000560371 PTPROQ16827 1216 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 KRT71Q3SY84 523 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 RPGRIP1Q96KN7 1286 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 TBC1D9BQ66K14 1250 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 FAM186BQ8IYM0 893 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 PGBD1Q96JS3 809 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 ANAPC5Q9UJX4 755 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 OVOS2A0A0G2JMS6 1433 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 OVOS2A0A0J9YW53 1432 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 OVOS2Q6IE36 1432 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 PPP6R2O75170 966 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 ELF1P32519 619 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 SLC39A14Q15043 492 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 NDUFAB1O14561 156 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 BUB1O43683 1085 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 LMNB1P20700 586 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 NEDD9Q14511 834 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 PRPSAP1Q14558 356 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 APOBEC3FQ8IUX4 373 aaKnown RBP14.67□□□□□ -0.06
TRAF3-208ENST00000560371 TMEM63CQ9P1W3 806 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 IFT122Q9HBG6 1241 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 NXF1Q9UBU9 619 aaKnown RBP14.67□□□□□ -0.06
TRAF3-208ENST00000560371 ZNF148Q9UQR1 794 aa14.67□□□□□ -0.06
TRAF3-208ENST00000560371 ABCC12Q96J65 1359 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 ZNF233A6NK53 670 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 THAP12O43422 761 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 NOL3O60936 208 aaKnown RBP14.66□□□□□ -0.06
TRAF3-208ENST00000560371 ZNF131P52739 623 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 PSMD6Q15008 389 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 TTBK2Q6IQ55 1244 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 LRRC4Q9HBW1 653 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 HGSO14964 777 aaPredicted RBP14.66□□□□□ -0.06
TRAF3-208ENST00000560371 NFX1Q12986 1120 aaKnown RBP14.66□□□□□ -0.06
TRAF3-208ENST00000560371 TYW1Q9NV66 732 aaKnown RBP14.66□□□□□ -0.06
TRAF3-208ENST00000560371 RNF181Q9P0P0 153 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 STK17AQ9UEE5 414 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 GNAT1P11488 350 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 ADAT2Q7Z6V5 191 aaKnown RBP14.66□□□□□ -0.06
TRAF3-208ENST00000560371 RYBPQ8N488 228 aaPredicted RBP14.66□□□□□ -0.06
TRAF3-208ENST00000560371 ZBED2Q9BTP6 218 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 ECE2O60344 883 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 LRRN2O75325 713 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 BFSP1Q12934 665 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 SH3RF3Q8TEJ3 882 aaPredicted RBP14.66□□□□□ -0.06
TRAF3-208ENST00000560371 PPP4R1Q8TF05 950 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 ARHGEF1Q92888 912 aaKnown RBP14.66□□□□□ -0.06
TRAF3-208ENST00000560371 PLEKHA4Q9H4M7 779 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 H7C0C1 242 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 ATP5OP48047 213 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 NT5C2P49902 561 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 OSTNP61366 133 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 NR5A1Q13285 461 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 MICAL1Q8TDZ2 1067 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 ARHGAP31Q2M1Z3 1444 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 UBN2Q6ZU65 1347 aa14.66□□□□□ -0.06
TRAF3-208ENST00000560371 MMP1P03956 469 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 CEP85LQ5SZL2 805 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 RASEFQ8IZ41 740 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 RPUSD2Q8IZ73 545 aaKnown RBP14.65□□□□□ -0.06
TRAF3-208ENST00000560371 SYNE4Q8N205 404 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms