RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	MIS18BP1	Q6P0N0	1132 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	SND1	Q7KZF4	910 aa	Known RBP eCLIP	10.24	□□□□□ -0.77	1e-6	■■□□□ 14
NEO1-208	ENST00000560328	SP8	Q8IXZ3	490 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	ANKRD13C	Q8N6S4	541 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	GIMAP7	Q8NHV1	300 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	AFAP1L1	Q8TED9	768 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	CEP170P1	Q96L14	293 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	DISC1	Q9NRI5	854 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	MYO3B	Q8WXR4	1341 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	GOLGA6B	A6NDN3	693 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	CLIC2	O15247	247 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	STK10	O94804	968 aa	Known RBP	10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	PPP2R5A	Q15172	486 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	KMT5B	Q4FZB7	885 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	FAM186B	Q8IYM0	893 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	RNF169	Q8NCN4	708 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	OXER1	Q8TDS5	423 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	CDHR1	Q96JP9	859 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	SAMD15	Q9P1V8	674 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	CSF1R	P07333	972 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	PTPRE	P23469	700 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	RCAN1	P53805	252 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	MRPS9	P82933	396 aa	Known RBP	10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	MAN2A1	Q16706	1144 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	TSGA10IP	Q3SY00	556 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	MAIP1	Q8WWC4	291 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	ACCS	Q96QU6	501 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	KMT5A	Q9NQR1	393 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	EMILIN3	Q9NT22	766 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	NRXN1	Q9ULB1	1477 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	PNPLA7	Q6ZV29	1317 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	EIF2AK2	P19525	551 aa	Known RBP	10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	SEPT2	Q15019	361 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	AFP	P02771	609 aa	Known RBP	10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	RC3H1	Q5TC82	1133 aa	Known RBP	10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	ARMC9	Q7Z3E5	817 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	BEGAIN	Q9BUH8	593 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	DDX41	Q9UJV9	622 aa	Known RBP	10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	FAM184B	Q9ULE4	1060 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	FRMPD1	Q5SYB0	1578 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	GOLGA6C	A6NDK9	693 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	GOLGA6D	P0CG33	693 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	CCNE1	P24864	410 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	RASSF7	Q02833	373 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	TFDP1	Q14186	410 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	PDIA6	Q15084	440 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	PPP1R13B	Q96KQ4	1090 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	GOLGA6A	Q9NYA3	693 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	KRIT1	O00522	736 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	PIK3CA	P42336	1068 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	PSMD2	Q13200	908 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	ERCC6L	Q2NKX8	1250 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	FAM83B	Q5T0W9	1011 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	STOX1	Q6ZVD7	989 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	CACTIN	Q8WUQ7	758 aa	Known RBP	10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	GDAP1L1	Q96MZ0	367 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	PCIF1	Q9H4Z3	704 aa		10.23	□□□□□ -0.77
NEO1-208	ENST00000560328	CTTN	Q14247	550 aa	Known RBP	10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	SF3B3	Q15393	1217 aa	Known RBP	10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	EEPD1	Q7L9B9	569 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	RETREG2	Q8NC44	543 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	LINC00116	Q8NCU8	138 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	VIM	P08670	466 aa	Known RBP	10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	IREB2	P48200	963 aa	Known RBP	10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	MFAP3	P55082	362 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	AP3B2	Q13367	1082 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	GRM4	Q14833	912 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	BCL2L12	Q9HB09	334 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	BZW2	Q9Y6E2	419 aa	Known RBP	10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	CEMIP	Q8WUJ3	1361 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	UBN2	Q6ZU65	1347 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	USP17L10	C9JJH3	530 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	ZBTB7A	O95365	584 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	KIF22	Q14807	665 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	TSC1	Q92574	1164 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	NSUN4	Q96CB9	384 aa	Known RBP	10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	PKNOX2	Q96KN3	472 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	RAB17	Q9H0T7	212 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	PARVG	Q9HBI0	331 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	ZNF215	Q9UL58	517 aa	Predicted RBP	10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	PCDHA6	Q9UN73	950 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	PCDHA8	Q9Y5H6	950 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	TCP1	P17987	556 aa	Known RBP	10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	RUFY4	Q6ZNE9	571 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	NT5C1B	Q96P26	610 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	THAP9	Q9H5L6	903 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	TMEM206	Q9H813	350 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	CD163L1	Q9NR16	1453 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	KIAA1210	Q9ULL0	1709 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	NDC80	O14777	642 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	CHGB	P05060	677 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	CCDC89	Q8N998	374 aa		10.22	□□□□□ -0.77
NEO1-208	ENST00000560328	PXDNL	A1KZ92	1463 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	USP17L15	C9J2P7	530 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	USP17L13	C9JLJ4	530 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	USP17L11	C9JVI0	530 aa		10.21	□□□□□ -0.77

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