RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 BIN2Q9UBW5 565 aaPredicted RBP20.05■□□□□ 0.8
SNX1-208ENST00000559844 THSD7BQ9C0I4 1608 aa20.05■□□□□ 0.8
SNX1-208ENST00000559844 GTPBP6O43824 516 aaPredicted RBP20.04■□□□□ 0.8
SNX1-208ENST00000559844 COG2Q14746 738 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 CCDC144BQ3MJ40 725 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 FAM160B2Q86V87 743 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 TBCKQ8TEA7 893 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 ASCC2Q9H1I8 757 aaPredicted RBP20.04■□□□□ 0.8
SNX1-208ENST00000559844 HSD3B7Q9H2F3 369 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 RIC8AQ9NPQ8 531 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 SLC45A1Q9Y2W3 748 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 OSBPP22059 807 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 TM4SF4P48230 202 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 SYDE2Q5VT97 1194 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 JAKMIP3Q5VZ66 844 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 BTNL9Q6UXG8 535 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 PRPF38AQ8NAV1 312 aaKnown RBP20.04■□□□□ 0.8
SNX1-208ENST00000559844 DISC1Q9NRI5 854 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 PNMA3Q9UL41 463 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 PPP1R9AQ9ULJ8 1098 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 PRR12Q9ULL5 1215 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 PYCARDQ9ULZ3 195 aa20.04■□□□□ 0.8
SNX1-208ENST00000559844 PLA2G6O60733 806 aa20.03■□□□□ 0.8
SNX1-208ENST00000559844 MAP2K2P36507 400 aa20.03■□□□□ 0.8
SNX1-208ENST00000559844 UBA7P41226 1012 aa20.03■□□□□ 0.8
SNX1-208ENST00000559844 STAT6P42226 847 aa20.03■□□□□ 0.8
SNX1-208ENST00000559844 MRPL12P52815 198 aaKnown RBP20.03■□□□□ 0.8
SNX1-208ENST00000559844 CUL5Q93034 780 aa20.03■□□□□ 0.8
SNX1-208ENST00000559844 RMND1Q9NWS8 449 aa20.03■□□□□ 0.8
SNX1-208ENST00000559844 SERPINC1P01008 464 aa20.03■□□□□ 0.8
SNX1-208ENST00000559844 CYP2C8P10632 490 aa20.03■□□□□ 0.8
SNX1-208ENST00000559844 LRRC8AQ8IWT6 810 aa20.03■□□□□ 0.8
SNX1-208ENST00000559844 FANCLQ9NW38 375 aa20.03■□□□□ 0.8
SNX1-208ENST00000559844 SPDYE16A6NNV3 312 aaPredicted RBP20.02■□□□□ 0.8
SNX1-208ENST00000559844 MYL1P05976 194 aa20.02■□□□□ 0.8
SNX1-208ENST00000559844 DSG3P32926 999 aa20.02■□□□□ 0.8
SNX1-208ENST00000559844 RRAGBQ5VZM2 374 aa20.02■□□□□ 0.8
SNX1-208ENST00000559844 REM2Q8IYK8 340 aaPredicted RBP20.02■□□□□ 0.8
SNX1-208ENST00000559844 RASSF8Q8NHQ8 419 aa20.02■□□□□ 0.8
SNX1-208ENST00000559844 CACTINQ8WUQ7 758 aaKnown RBP20.02■□□□□ 0.8
SNX1-208ENST00000559844 ATG4CQ96DT6 458 aa20.02■□□□□ 0.8
SNX1-208ENST00000559844 P2RX7Q99572 595 aaKnown RBP20.02■□□□□ 0.8
SNX1-208ENST00000559844 CUEDC2Q9H467 287 aa20.02■□□□□ 0.8
SNX1-208ENST00000559844 MAGEF1Q9HAY2 307 aa20.02■□□□□ 0.8
SNX1-208ENST00000559844 TMEM260Q9NX78 707 aa20.02■□□□□ 0.8
SNX1-208ENST00000559844 HOXC10Q9NYD6 342 aa20.02■□□□□ 0.8
SNX1-208ENST00000559844 A0A0G2JMZ2 1700 aa20.02■□□□□ 0.79
SNX1-208ENST00000559844 UBASH3AP57075 661 aa20.01■□□□□ 0.79
SNX1-208ENST00000559844 HERVK_113P62684 666 aa20.01■□□□□ 0.79
SNX1-208ENST00000559844 FILIP1Q7Z7B0 1213 aa20.01■□□□□ 0.79
SNX1-208ENST00000559844 SMCR8Q8TEV9 937 aaPredicted RBP20.01■□□□□ 0.79
SNX1-208ENST00000559844 NAP1L5Q96NT1 182 aaPredicted RBP20.01■□□□□ 0.79
SNX1-208ENST00000559844 PARK7Q99497 189 aaKnown RBP20.01■□□□□ 0.79
SNX1-208ENST00000559844 ZCCHC17Q9NP64 241 aaKnown RBP20.01■□□□□ 0.79
SNX1-208ENST00000559844 MYPNQ86TC9 1320 aa20.01■□□□□ 0.79
SNX1-208ENST00000559844 PCNTO95613 3336 aa20.01■□□□□ 0.79
SNX1-208ENST00000559844 SMCHD1A6NHR9 2005 aa20.01■□□□□ 0.79
SNX1-208ENST00000559844 PPP1R11O60927 126 aaPredicted RBP20.01■□□□□ 0.79
SNX1-208ENST00000559844 ATP1A3P13637 1013 aa20.01■□□□□ 0.79
SNX1-208ENST00000559844 SNAP25P60880 206 aa20.01■□□□□ 0.79
SNX1-208ENST00000559844 SEMA3FQ13275 785 aa20.01■□□□□ 0.79
SNX1-208ENST00000559844 KARSQ15046 597 aaKnown RBP20.01■□□□□ 0.79
SNX1-208ENST00000559844 TAF1CQ15572 869 aaPredicted RBP20.01■□□□□ 0.79
SNX1-208ENST00000559844 CCDC150Q8NCX0 1101 aa20.01■□□□□ 0.79
SNX1-208ENST00000559844 NAP1L4Q99733 375 aaKnown RBP20.01■□□□□ 0.79
SNX1-208ENST00000559844 CEP350Q5VT06 3117 aa20■□□□□ 0.79
SNX1-208ENST00000559844 CLK2P49760 499 aaKnown RBP20■□□□□ 0.79
SNX1-208ENST00000559844 TERF1P54274 439 aa20■□□□□ 0.79
SNX1-208ENST00000559844 LRMPQ12912 555 aa20■□□□□ 0.79
SNX1-208ENST00000559844 NFE2L3Q9Y4A8 694 aa20■□□□□ 0.79
SNX1-208ENST00000559844 VWA5AO00534 786 aa19.99■□□□□ 0.79
SNX1-208ENST00000559844 TMC6Q7Z403 805 aa19.99■□□□□ 0.79
SNX1-208ENST00000559844 CABP7Q86V35 215 aa19.99■□□□□ 0.79
SNX1-208ENST00000559844 CDC37Q16543 378 aaPredicted RBP19.99■□□□□ 0.79
SNX1-208ENST00000559844 MCTP2Q6DN12 878 aa19.99■□□□□ 0.79
SNX1-208ENST00000559844 PSTPIP2Q9H939 334 aa19.99■□□□□ 0.79
SNX1-208ENST00000559844 ADAMTS5Q9UNA0 930 aa19.99■□□□□ 0.79
SNX1-208ENST00000559844 CTDP1Q9Y5B0 961 aaPredicted RBP19.99■□□□□ 0.79
SNX1-208ENST00000559844 ZNF18P17022 549 aa19.98■□□□□ 0.79
SNX1-208ENST00000559844 CDK11BP21127 795 aaKnown RBP19.98■□□□□ 0.79
SNX1-208ENST00000559844 CASP1P29466 404 aa19.98■□□□□ 0.79
SNX1-208ENST00000559844 CDC25AP30304 524 aa19.98■□□□□ 0.79
SNX1-208ENST00000559844 QRICH1Q2TAL8 776 aa19.98■□□□□ 0.79
SNX1-208ENST00000559844 DNTTIP2Q5QJE6 756 aaKnown RBP19.98■□□□□ 0.79
SNX1-208ENST00000559844 SPATA1Q5VX52 437 aa19.98■□□□□ 0.79
SNX1-208ENST00000559844 PPP4R3AQ6IN85 833 aa19.98■□□□□ 0.79
SNX1-208ENST00000559844 CCDC174Q6PII3 467 aa19.98■□□□□ 0.79
SNX1-208ENST00000559844 RANBP17Q9H2T7 1088 aaKnown RBP19.98■□□□□ 0.79
SNX1-208ENST00000559844 SLC38A10Q9HBR0 1119 aa19.98■□□□□ 0.79
SNX1-208ENST00000559844 ZBED4O75132 1171 aa19.97■□□□□ 0.79
SNX1-208ENST00000559844 ALDH1A1P00352 501 aa19.97■□□□□ 0.79
SNX1-208ENST00000559844 RPN1P04843 607 aaKnown RBP19.97■□□□□ 0.79
SNX1-208ENST00000559844 CUL4BQ13620 913 aa19.97■□□□□ 0.79
SNX1-208ENST00000559844 CALCRLQ16602 461 aa19.97■□□□□ 0.79
SNX1-208ENST00000559844 TMEM266Q2M3C6 531 aa19.97■□□□□ 0.79
SNX1-208ENST00000559844 POTEEQ6S8J3 1075 aa19.97■□□□□ 0.79
SNX1-208ENST00000559844 LBX2Q6XYB7 198 aa19.97■□□□□ 0.79
SNX1-208ENST00000559844 STAMQ92783 540 aa19.97■□□□□ 0.79
SNX1-208ENST00000559844 MTMR9Q96QG7 549 aa19.97■□□□□ 0.79
SNX1-208ENST00000559844 MTRQ99707 1265 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms