RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 STAT3P40763 770 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 TLE2Q04725 743 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 KLRC3Q07444 240 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 AGERQ15109 404 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 CCSAPQ6IQ19 270 aaPredicted RBP6.95□□□□□ -1.3
USP3-215ENST00000559771 KBTBD3Q8NAB2 608 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 GTPBP3Q969Y2 492 aaKnown RBP6.95□□□□□ -1.3
USP3-215ENST00000559771 FERMT2Q96AC1 680 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 FAM161BQ96MY7 647 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 MMP19Q99542 508 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 LRRCC1Q9C099 1032 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 TTYH1Q9H313 450 aaPredicted RBP6.95□□□□□ -1.3
USP3-215ENST00000559771 DCTPP1Q9H773 170 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 SH2D4AQ9H788 454 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 ZNF395Q9H8N7 513 aaPredicted RBP6.95□□□□□ -1.3
USP3-215ENST00000559771 ECHDC1Q9NTX5 307 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 NYAP2Q9P242 653 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 ARPP21Q9UBL0 812 aaPredicted RBP6.95□□□□□ -1.3
USP3-215ENST00000559771 NRBP1Q9UHY1 535 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 RCAN3Q9UKA8 241 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 DIS3Q9Y2L1 958 aaKnown RBP6.95□□□□□ -1.3
USP3-215ENST00000559771 LCTP09848 1927 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 LRRC37A2A6NM11 1700 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 MCM3APO60318 1980 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 A0A1W2PQ45 241 aaPredicted RBP6.94□□□□□ -1.3
USP3-215ENST00000559771 A0A1W2PQY0 241 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 MYADML2A6NDP7 307 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 KBTBD13C9JR72 458 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 ATP2A1O14983 1001 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 GIMAP6Q6P9H5 292 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 MAMDC4Q6UXC1 1216 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.94□□□□□ -1.3
USP3-215ENST00000559771 STK11IPQ8N1F8 1099 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 KDF1Q8NAX2 398 aaPredicted RBP6.94□□□□□ -1.3
USP3-215ENST00000559771 KLHDC9Q8NEP7 349 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 OTUD7AQ8TE49 926 aaPredicted RBP6.94□□□□□ -1.3
USP3-215ENST00000559771 APPBP2Q92624 585 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 MKL1Q969V6 931 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 SEC62Q99442 399 aaKnown RBP6.94□□□□□ -1.3
USP3-215ENST00000559771 LBHD1Q9BQE6 289 aaPredicted RBP6.94□□□□□ -1.3
USP3-215ENST00000559771 KATNBL1Q9H079 304 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 GOPCQ9HD26 462 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 XPNPEP3Q9NQH7 507 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 TACC3Q9Y6A5 838 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 SYNRGQ9UMZ2 1314 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 REV3LO60673 3130 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 PLIN4Q96Q06 1357 aa6.94□□□□□ -1.3
USP3-215ENST00000559771 KIAA0355O15063 1070 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 CTAGE5O15320 804 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 RNF113AO15541 343 aaKnown RBP6.93□□□□□ -1.3
USP3-215ENST00000559771 GPAA1O43292 621 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 PRDM1O75626 825 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 MX2P20592 715 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 FAAP100Q0VG06 881 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 KCTD2Q14681 263 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 SNRNP48Q6IEG0 339 aaKnown RBP6.93□□□□□ -1.3
USP3-215ENST00000559771 ZSCAN25Q6NSZ9 544 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 ANKRD33Q7Z3H0 272 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 PI4K2BQ8TCG2 481 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 CEP95Q96GE4 821 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 CDX2Q99626 313 aaPredicted RBP6.93□□□□□ -1.3
USP3-215ENST00000559771 SLF1Q9BQI6 1058 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 TEX13BQ9BXU2 312 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 SLC38A10Q9HBR0 1119 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 PRDM5Q9NQX1 630 aaPredicted RBP6.93□□□□□ -1.3
USP3-215ENST00000559771 SLC5A4Q9NY91 659 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 MTMR4Q9NYA4 1195 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 CLIP2Q9UDT6 1046 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 PCDHB15Q9Y5E8 787 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 ASTN1O14525 1302 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 ZNF536O15090 1300 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 SYNGAP1Q96PV0 1343 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 SALL3Q9BXA9 1300 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 MUC3AQ02505 3323 aa6.93□□□□□ -1.3
USP3-215ENST00000559771 MINDY4BA8MYZ0 360 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 CLTBP09497 229 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 RARBP10826 455 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 AKR1A1P14550 325 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 NDUFV2P19404 249 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 PTGS1P23219 599 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 CDK7P50613 346 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 ACLYP53396 1101 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 SMAD3P84022 425 aaKnown RBP6.92□□□□□ -1.3
USP3-215ENST00000559771 C16orf59Q7L2K0 433 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 RASGRP2Q7LDG7 609 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.92□□□□□ -1.3
USP3-215ENST00000559771 IFNL3Q8IZI9 196 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 LRRC47Q8N1G4 583 aaKnown RBP6.92□□□□□ -1.3
USP3-215ENST00000559771 MSL3Q8N5Y2 521 aaKnown RBP6.92□□□□□ -1.3
USP3-215ENST00000559771 PRPF38AQ8NAV1 312 aaKnown RBP6.92□□□□□ -1.3
USP3-215ENST00000559771 TOX2Q96NM4 488 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 UPF3AQ9H1J1 476 aaKnown RBP6.92□□□□□ -1.3
USP3-215ENST00000559771 RAVER2Q9HCJ3 691 aaKnown RBP6.92□□□□□ -1.3
USP3-215ENST00000559771 INCENPQ9NQS7 918 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 PGPEP1Q9NXJ5 209 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 PRKAG2Q9UGJ0 569 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 TBX21Q9UL17 535 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 DDX49Q9Y6V7 483 aaKnown RBP6.92□□□□□ -1.3
USP3-215ENST00000559771 CUL9Q8IWT3 2517 aa6.92□□□□□ -1.3
USP3-215ENST00000559771 CHD7Q9P2D1 2997 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms