RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 SEZ6LQ9BYH1 1024 aa23.85■■□□□ 1.41
TSPAN3-206ENST00000559373 PXMP2Q9NR77 195 aa23.85■■□□□ 1.41
TSPAN3-206ENST00000559373 U3KPZ7 1027 aaPredicted RBP23.85■■□□□ 1.41
TSPAN3-206ENST00000559373 NR3C2P08235 984 aa23.84■■□□□ 1.41
TSPAN3-206ENST00000559373 SUPT20HL2P0C7V6 817 aa23.84■■□□□ 1.41
TSPAN3-206ENST00000559373 PCDHA1Q9Y5I3 950 aa23.84■■□□□ 1.41
TSPAN3-206ENST00000559373 ZBTB5O15062 677 aa23.83■■□□□ 1.41
TSPAN3-206ENST00000559373 GH1P01241 217 aa23.83■■□□□ 1.41
TSPAN3-206ENST00000559373 GRM4Q14833 912 aa23.83■■□□□ 1.41
TSPAN3-206ENST00000559373 RPUSD2Q8IZ73 545 aaKnown RBP23.83■■□□□ 1.41
TSPAN3-206ENST00000559373 MTMR8Q96EF0 704 aa23.83■■□□□ 1.41
TSPAN3-206ENST00000559373 IWS1Q96ST2 819 aa23.83■■□□□ 1.41
TSPAN3-206ENST00000559373 MSRAQ9UJ68 235 aa23.83■■□□□ 1.41
TSPAN3-206ENST00000559373 TCF20Q9UGU0 1960 aaKnown RBP23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 SGSM2O43147 1006 aa23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 CYTH3O43739 400 aa23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 HSD17B4P51659 736 aa23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 WTAPQ15007 396 aa23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 NFRKBQ6P4R8 1299 aa23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 RALYLQ86SE5 291 aaKnown RBP23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 SKAP1Q86WV1 359 aa23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 IL31RAQ8NI17 732 aa23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 MTIF3Q9H2K0 278 aaKnown RBP23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 PRDM6Q9NQX0 595 aa23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 DDX41Q9UJV9 622 aaKnown RBP23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 MRVI1Q9Y6F6 885 aa23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 SLC4A7Q9Y6M7 1214 aa23.82■■□□□ 1.4
TSPAN3-206ENST00000559373 KPNA6O60684 536 aa23.81■■□□□ 1.4
TSPAN3-206ENST00000559373 ANTXR2P58335 489 aa23.81■■□□□ 1.4
TSPAN3-206ENST00000559373 GDF6Q6KF10 455 aaPredicted RBP23.81■■□□□ 1.4
TSPAN3-206ENST00000559373 FCHSD1Q86WN1 690 aa23.81■■□□□ 1.4
TSPAN3-206ENST00000559373 NCOA7Q8NI08 942 aa23.81■■□□□ 1.4
TSPAN3-206ENST00000559373 KAT2BQ92831 832 aa23.81■■□□□ 1.4
TSPAN3-206ENST00000559373 ALG1Q9BT22 464 aa23.81■■□□□ 1.4
TSPAN3-206ENST00000559373 MYL10Q9BUA6 226 aa23.81■■□□□ 1.4
TSPAN3-206ENST00000559373 NOD1Q9Y239 953 aa23.81■■□□□ 1.4
TSPAN3-206ENST00000559373 ERICH2A1L162 156 aa23.8■■□□□ 1.4
TSPAN3-206ENST00000559373 ZNF286BP0CG31 522 aa23.8■■□□□ 1.4
TSPAN3-206ENST00000559373 COL9A3Q14050 684 aaPredicted RBP23.8■■□□□ 1.4
TSPAN3-206ENST00000559373 PTGISQ16647 500 aa23.8■■□□□ 1.4
TSPAN3-206ENST00000559373 TMEM67Q5HYA8 995 aa23.8■■□□□ 1.4
TSPAN3-206ENST00000559373 GPKOWQ92917 476 aaPredicted RBP eCLIP23.8■■□□□ 1.4
TSPAN3-206ENST00000559373 PDCD2LQ9BRP1 358 aa23.8■■□□□ 1.4
TSPAN3-206ENST00000559373 RBM8AQ9Y5S9 174 aaKnown RBP23.8■■□□□ 1.4
TSPAN3-206ENST00000559373 EIF3JO75822 258 aaKnown RBP23.79■■□□□ 1.4
TSPAN3-206ENST00000559373 RGS20O76081 388 aa23.79■■□□□ 1.4
TSPAN3-206ENST00000559373 IQCF3P0C7M6 154 aa23.79■■□□□ 1.4
TSPAN3-206ENST00000559373 RAB30Q15771 203 aa23.79■■□□□ 1.4
TSPAN3-206ENST00000559373 CCDC85BQ15834 202 aaPredicted RBP23.79■■□□□ 1.4
TSPAN3-206ENST00000559373 GAS2L1Q99501 681 aaPredicted RBP23.79■■□□□ 1.4
TSPAN3-206ENST00000559373 FTOQ9C0B1 505 aaKnown RBP eCLIP23.79■■□□□ 1.4
TSPAN3-206ENST00000559373 RIOX1Q9H6W3 641 aa23.79■■□□□ 1.4
TSPAN3-206ENST00000559373 SLC28A3Q9HAS3 691 aa23.79■■□□□ 1.4
TSPAN3-206ENST00000559373 TRANK1O15050 2925 aa23.79■■□□□ 1.4
TSPAN3-206ENST00000559373 IGFBP4P22692 258 aa23.78■■□□□ 1.4
TSPAN3-206ENST00000559373 TROAPQ12815 778 aa23.78■■□□□ 1.4
TSPAN3-206ENST00000559373 ADGRE1Q14246 886 aa23.78■■□□□ 1.4
TSPAN3-206ENST00000559373 PGM5Q15124 567 aa23.78■■□□□ 1.4
TSPAN3-206ENST00000559373 DHX37Q8IY37 1157 aaKnown RBP23.78■■□□□ 1.4
TSPAN3-206ENST00000559373 RETREG2Q8NC44 543 aa23.78■■□□□ 1.4
TSPAN3-206ENST00000559373 IGDCC4Q8TDY8 1250 aa23.78■■□□□ 1.4
TSPAN3-206ENST00000559373 MAP4K1Q92918 833 aa23.78■■□□□ 1.4
TSPAN3-206ENST00000559373 CTAGE1Q96RT6 745 aa23.78■■□□□ 1.4
TSPAN3-206ENST00000559373 ATP2A2P16615 1042 aaKnown RBP23.77■■□□□ 1.4
TSPAN3-206ENST00000559373 CASTP20810 708 aaKnown RBP23.77■■□□□ 1.4
TSPAN3-206ENST00000559373 SP2Q02086 613 aa23.77■■□□□ 1.4
TSPAN3-206ENST00000559373 DGKDQ16760 1214 aa23.77■■□□□ 1.4
TSPAN3-206ENST00000559373 MB21D2Q8IYB1 491 aaPredicted RBP23.77■■□□□ 1.4
TSPAN3-206ENST00000559373 BCAS3Q9H6U6 928 aa23.77■■□□□ 1.4
TSPAN3-206ENST00000559373 HDAC6Q9UBN7 1215 aa23.77■■□□□ 1.4
TSPAN3-206ENST00000559373 PRRC2BQ5JSZ5 2229 aaKnown RBP23.77■■□□□ 1.4
TSPAN3-206ENST00000559373 PSEN2P49810 448 aa23.76■■□□□ 1.39
TSPAN3-206ENST00000559373 ZNF200P98182 395 aaPredicted RBP23.76■■□□□ 1.39
TSPAN3-206ENST00000559373 PTPN11Q06124 597 aaPredicted RBP23.76■■□□□ 1.39
TSPAN3-206ENST00000559373 SART3Q15020 963 aaKnown RBP23.76■■□□□ 1.39
TSPAN3-206ENST00000559373 CATIPQ7Z7H3 387 aa23.76■■□□□ 1.39
TSPAN3-206ENST00000559373 RAB11FIP4Q86YS3 637 aa23.76■■□□□ 1.39
TSPAN3-206ENST00000559373 MAF1Q9H063 256 aa23.76■■□□□ 1.39
TSPAN3-206ENST00000559373 CERS4Q9HA82 394 aa23.76■■□□□ 1.39
TSPAN3-206ENST00000559373 PNMA6FA0A0J9YX94 578 aa23.75■■□□□ 1.39
TSPAN3-206ENST00000559373 GCOM1H8Y6P7 765 aaPredicted RBP23.75■■□□□ 1.39
TSPAN3-206ENST00000559373 POLR2MP0CAP2 368 aa23.75■■□□□ 1.39
TSPAN3-206ENST00000559373 BFSP2Q13515 415 aa23.75■■□□□ 1.39
TSPAN3-206ENST00000559373 PPP2R2DQ66LE6 453 aa23.75■■□□□ 1.39
TSPAN3-206ENST00000559373 VSIG10LQ86VR7 867 aa23.75■■□□□ 1.39
TSPAN3-206ENST00000559373 CMTR1Q8N1G2 835 aaKnown RBP23.75■■□□□ 1.39
TSPAN3-206ENST00000559373 DHX38Q92620 1227 aaKnown RBP23.75■■□□□ 1.39
TSPAN3-206ENST00000559373 MICAL3Q7RTP6 2002 aa23.75■■□□□ 1.39
TSPAN3-206ENST00000559373 RFXAPO00287 272 aa23.74■■□□□ 1.39
TSPAN3-206ENST00000559373 GGPS1O95749 300 aa23.74■■□□□ 1.39
TSPAN3-206ENST00000559373 RXRAP19793 462 aa23.74■■□□□ 1.39
TSPAN3-206ENST00000559373 GHRHRQ02643 423 aa23.74■■□□□ 1.39
TSPAN3-206ENST00000559373 LAMC2Q13753 1193 aa23.74■■□□□ 1.39
TSPAN3-206ENST00000559373 MFSD10Q14728 455 aa23.74■■□□□ 1.39
TSPAN3-206ENST00000559373 HSDL1Q3SXM5 330 aa23.74■■□□□ 1.39
TSPAN3-206ENST00000559373 TMCO2Q7Z6W1 182 aaPredicted RBP23.74■■□□□ 1.39
TSPAN3-206ENST00000559373 C7orf31Q8N865 590 aa23.74■■□□□ 1.39
TSPAN3-206ENST00000559373 LY9Q9HBG7 655 aa23.74■■□□□ 1.39
TSPAN3-206ENST00000559373 SPTBN5Q9NRC6 3674 aaKnown RBP23.74■■□□□ 1.39
TSPAN3-206ENST00000559373 LOXHD1Q8IVV2 1947 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms