RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 GULP1Q9UBP9 304 aa6.45□□□□□ -1.38
ATXN3-246ENST00000557030 RAPGEFL1Q9UHV5 662 aa6.45□□□□□ -1.38
ATXN3-246ENST00000557030 RWDD3Q9Y3V2 267 aa6.45□□□□□ -1.38
ATXN3-246ENST00000557030 ZC3H12DA2A288 527 aaKnown RBP6.44□□□□□ -1.38
ATXN3-246ENST00000557030 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
ATXN3-246ENST00000557030 PRR5P85299 388 aa6.44□□□□□ -1.38
ATXN3-246ENST00000557030 SLC10A6Q3KNW5 377 aa6.44□□□□□ -1.38
ATXN3-246ENST00000557030 SV2CQ496J9 727 aa6.44□□□□□ -1.38
ATXN3-246ENST00000557030 E4F1Q66K89 784 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-246ENST00000557030 TTLL10Q6ZVT0 673 aa6.44□□□□□ -1.38
ATXN3-246ENST00000557030 CCDC103Q8IW40 242 aa6.44□□□□□ -1.38
ATXN3-246ENST00000557030 Q8N1Y9 231 aa6.44□□□□□ -1.38
ATXN3-246ENST00000557030 EPN3Q9H201 632 aa6.44□□□□□ -1.38
ATXN3-246ENST00000557030 TMEFF2Q9UIK5 374 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-246ENST00000557030 SNAPC4Q5SXM2 1469 aa6.44□□□□□ -1.38
ATXN3-246ENST00000557030 IFT140Q96RY7 1462 aa6.44□□□□□ -1.38
ATXN3-246ENST00000557030 F8W031 263 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-246ENST00000557030 RFXAPO00287 272 aa6.43□□□□□ -1.38
ATXN3-246ENST00000557030 NPHS1O60500 1241 aa6.43□□□□□ -1.38
ATXN3-246ENST00000557030 BUB1BO60566 1050 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-246ENST00000557030 ATF2P15336 505 aa6.43□□□□□ -1.38
ATXN3-246ENST00000557030 NCKAP1LP55160 1127 aa6.43□□□□□ -1.38
ATXN3-246ENST00000557030 SF1Q15637 639 aaKnown RBP6.43□□□□□ -1.38
ATXN3-246ENST00000557030 DDR2Q16832 855 aa6.43□□□□□ -1.38
ATXN3-246ENST00000557030 DENND5AQ6IQ26 1287 aa6.43□□□□□ -1.38
ATXN3-246ENST00000557030 TMEM151BQ8IW70 566 aa6.43□□□□□ -1.38
ATXN3-246ENST00000557030 CCDC140Q96MF4 163 aa6.43□□□□□ -1.38
ATXN3-246ENST00000557030 TRIM55Q9BYV6 548 aa6.43□□□□□ -1.38
ATXN3-246ENST00000557030 RNF38Q9H0F5 515 aa6.43□□□□□ -1.38
ATXN3-246ENST00000557030 LRP2BPQ9P2M1 347 aa6.43□□□□□ -1.38
ATXN3-246ENST00000557030 GRIN2BQ13224 1484 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 A0A1W2PQJ5 194 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 GFRA1P56159 465 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 HTRA3P83110 453 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 RBM10P98175 930 aaKnown RBP6.42□□□□□ -1.38
ATXN3-246ENST00000557030 ACBD5Q5T8D3 534 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-246ENST00000557030 TCERG1LQ5VWI1 586 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 WWC2Q6AWC2 1192 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 IQCEQ6IPM2 695 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 EEPD1Q7L9B9 569 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 CKAP2LQ8IYA6 745 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 KCNC2Q96PR1 638 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 PBRM1Q86U86 1689 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 CHD1O14646 1710 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 FMN1Q68DA7 1419 aa6.42□□□□□ -1.38
ATXN3-246ENST00000557030 EIF4G3O43432 1585 aaKnown RBP6.41□□□□□ -1.38
ATXN3-246ENST00000557030 ADAMTS12P58397 1594 aa6.41□□□□□ -1.38
ATXN3-246ENST00000557030 TRIM13O60858 407 aa6.41□□□□□ -1.38
ATXN3-246ENST00000557030 ASGR2P07307 311 aa6.41□□□□□ -1.38
ATXN3-246ENST00000557030 TARBP2Q15633 366 aaKnown RBP6.41□□□□□ -1.38
ATXN3-246ENST00000557030 SLC35F1Q5T1Q4 408 aa6.41□□□□□ -1.38
ATXN3-246ENST00000557030 CNKSR3Q6P9H4 555 aa6.41□□□□□ -1.38
ATXN3-246ENST00000557030 MARCH10Q8NA82 808 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-246ENST00000557030 ANP32EQ9BTT0 268 aa6.41□□□□□ -1.38
ATXN3-246ENST00000557030 RXFP1Q9HBX9 757 aa6.41□□□□□ -1.38
ATXN3-246ENST00000557030 NPFFR2Q9Y5X5 522 aa6.41□□□□□ -1.38
ATXN3-246ENST00000557030 LRRIQ1Q96JM4 1722 aa6.41□□□□□ -1.38
ATXN3-246ENST00000557030 SETD5Q9C0A6 1442 aa6.41□□□□□ -1.38
ATXN3-246ENST00000557030 A0A1W2PQU0 124 aa6.4□□□□□ -1.38
ATXN3-246ENST00000557030 CCDC85CA6NKD9 419 aa6.4□□□□□ -1.38
ATXN3-246ENST00000557030 CPP00450 1065 aa6.4□□□□□ -1.38
ATXN3-246ENST00000557030 PLA2G1BP04054 148 aaKnown RBP6.4□□□□□ -1.38
ATXN3-246ENST00000557030 GRIA2P42262 883 aa6.4□□□□□ -1.38
ATXN3-246ENST00000557030 AFF3P51826 1226 aaKnown RBP6.4□□□□□ -1.38
ATXN3-246ENST00000557030 RAB33AQ14088 237 aa6.4□□□□□ -1.38
ATXN3-246ENST00000557030 SLC9A5Q14940 896 aa6.4□□□□□ -1.38
ATXN3-246ENST00000557030 PRSS53Q2L4Q9 553 aa6.4□□□□□ -1.38
ATXN3-246ENST00000557030 NLRP10Q86W26 655 aa6.4□□□□□ -1.38
ATXN3-246ENST00000557030 TP53I13Q8NBR0 393 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-246ENST00000557030 CPA5Q8WXQ8 436 aa6.4□□□□□ -1.38
ATXN3-246ENST00000557030 PEX11GQ96HA9 241 aa6.4□□□□□ -1.38
ATXN3-246ENST00000557030 X6R8D5 127 aa6.4□□□□□ -1.38
ATXN3-246ENST00000557030 RAB3GAP2Q9H2M9 1393 aa6.4□□□□□ -1.39
ATXN3-246ENST00000557030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.4□□□□□ -1.39
ATXN3-246ENST00000557030 CCER2I3L3R5 266 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 IGSF3O75054 1194 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 ZBTB7AO95365 584 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 FUCA1P04066 466 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 NTRK1P04629 796 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 NCAM1P13591 858 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 PFKLP17858 780 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 PPP2R2AP63151 447 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 VWA3BQ502W6 1294 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 CABP7Q86V35 215 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 RIOX2Q8IUF8 465 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 TMEM145Q8NBT3 493 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 RCBTB1Q8NDN9 531 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 C20orf173Q96LM9 149 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 FBXL7Q9UJT9 491 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 MSRB2Q9Y3D2 182 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 MAPKBP1O60336 1514 aa6.39□□□□□ -1.39
ATXN3-246ENST00000557030 U2SURPO15042 1029 aaKnown RBP6.38□□□□□ -1.39
ATXN3-246ENST00000557030 SGSM2O43147 1006 aa6.38□□□□□ -1.39
ATXN3-246ENST00000557030 SNRPB2P08579 225 aaKnown RBP6.38□□□□□ -1.39
ATXN3-246ENST00000557030 PMLP29590 882 aa6.38□□□□□ -1.39
ATXN3-246ENST00000557030 MC3RP41968 323 aa6.38□□□□□ -1.39
ATXN3-246ENST00000557030 LIMS1P48059 325 aa6.38□□□□□ -1.39
ATXN3-246ENST00000557030 SLC6A11P48066 632 aa6.38□□□□□ -1.39
ATXN3-246ENST00000557030 FOXO4P98177 505 aa6.38□□□□□ -1.39
ATXN3-246ENST00000557030 DLX2Q07687 328 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms