RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 FAM237AA0A1B0GTK4 181 aa26.89■■□□□ 1.9
SIX4-203ENST00000556952 CIITAP33076 1130 aa26.89■■□□□ 1.9
SIX4-203ENST00000556952 RPS6P62753 249 aaKnown RBP26.89■■□□□ 1.9
SIX4-203ENST00000556952 FAM160A1Q05DH4 1040 aa26.89■■□□□ 1.9
SIX4-203ENST00000556952 SYTL5Q8TDW5 730 aaPredicted RBP26.89■■□□□ 1.9
SIX4-203ENST00000556952 DDX19AQ9NUU7 478 aaKnown RBP26.89■■□□□ 1.9
SIX4-203ENST00000556952 FRMPD4Q14CM0 1322 aa26.89■■□□□ 1.9
SIX4-203ENST00000556952 RPTORQ8N122 1335 aa26.89■■□□□ 1.9
SIX4-203ENST00000556952 SLC25A27O95847 323 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 CALCRLQ16602 461 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 NSMFQ6X4W1 530 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 DTHD1Q6ZMT9 781 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 POTEDQ86YR6 584 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 TMEM63CQ9P1W3 806 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 VWA3AA6NCI4 1184 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 SLC37A4O43826 429 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 LONP1P36776 959 aaKnown RBP26.88■■□□□ 1.89
SIX4-203ENST00000556952 GRIN1Q05586 938 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 Q3C1V9 767 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 CCDC183Q5T5S1 534 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 SLC30A10Q6XR72 485 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 CSRNP2Q9H175 543 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 DACT1Q9NYF0 836 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 FAM13BQ9NYF5 915 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 COL20A1Q9P218 1284 aa26.88■■□□□ 1.89
SIX4-203ENST00000556952 A0A1B0GVL5 298 aa26.87■■□□□ 1.89
SIX4-203ENST00000556952 NR1I2O75469 434 aa26.87■■□□□ 1.89
SIX4-203ENST00000556952 PFKFB1P16118 471 aa26.87■■□□□ 1.89
SIX4-203ENST00000556952 ERVK-9P63128 1117 aa26.87■■□□□ 1.89
SIX4-203ENST00000556952 ERVK-24P63145 666 aa26.87■■□□□ 1.89
SIX4-203ENST00000556952 Q4G0T1 1027 aa26.87■■□□□ 1.89
SIX4-203ENST00000556952 ENGASEQ8NFI3 743 aa26.87■■□□□ 1.89
SIX4-203ENST00000556952 MTMR9Q96QG7 549 aa26.87■■□□□ 1.89
SIX4-203ENST00000556952 HPSEQ9Y251 543 aa26.87■■□□□ 1.89
SIX4-203ENST00000556952 LCTP09848 1927 aa26.86■■□□□ 1.89
SIX4-203ENST00000556952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.86■■□□□ 1.89
SIX4-203ENST00000556952 CTU1Q7Z7A3 348 aaKnown RBP26.86■■□□□ 1.89
SIX4-203ENST00000556952 TRIM47Q96LD4 638 aa26.86■■□□□ 1.89
SIX4-203ENST00000556952 PFASO15067 1338 aa26.86■■□□□ 1.89
SIX4-203ENST00000556952 PSMC4P43686 418 aa26.85■■□□□ 1.89
SIX4-203ENST00000556952 NDUFA8P51970 172 aa26.85■■□□□ 1.89
SIX4-203ENST00000556952 SNW1Q13573 536 aaKnown RBP26.85■■□□□ 1.89
SIX4-203ENST00000556952 BAATQ14032 418 aaPredicted RBP26.85■■□□□ 1.89
SIX4-203ENST00000556952 OTOP1Q7RTM1 612 aa26.85■■□□□ 1.89
SIX4-203ENST00000556952 FMR1NBQ8N0W7 255 aaPredicted RBP26.85■■□□□ 1.89
SIX4-203ENST00000556952 GPRC5AQ8NFJ5 357 aa26.85■■□□□ 1.89
SIX4-203ENST00000556952 MOV10L1Q9BXT6 1211 aaKnown RBP26.85■■□□□ 1.89
SIX4-203ENST00000556952 A1CFQ9NQ94 594 aaKnown RBP26.85■■□□□ 1.89
SIX4-203ENST00000556952 CYP39A1Q9NYL5 469 aa26.85■■□□□ 1.89
SIX4-203ENST00000556952 TRIM17Q9Y577 477 aa26.85■■□□□ 1.89
SIX4-203ENST00000556952 PLXNB2O15031 1838 aa26.85■■□□□ 1.89
SIX4-203ENST00000556952 KIF22Q14807 665 aa26.84■■□□□ 1.89
SIX4-203ENST00000556952 IL17AQ16552 155 aa26.84■■□□□ 1.89
SIX4-203ENST00000556952 EFCC1Q9HA90 598 aa26.84■■□□□ 1.89
SIX4-203ENST00000556952 TBX3O15119 743 aa26.84■■□□□ 1.89
SIX4-203ENST00000556952 ZNF76P36508 570 aa26.84■■□□□ 1.89
SIX4-203ENST00000556952 NCAPG2Q86XI2 1143 aa26.84■■□□□ 1.89
SIX4-203ENST00000556952 AK8Q96MA6 479 aa26.84■■□□□ 1.89
SIX4-203ENST00000556952 GZF1Q9H116 711 aaPredicted RBP26.84■■□□□ 1.89
SIX4-203ENST00000556952 PORCNQ9H237 461 aa26.84■■□□□ 1.89
SIX4-203ENST00000556952 KCNMB3Q9NPA1 279 aa26.84■■□□□ 1.89
SIX4-203ENST00000556952 KINO60870 393 aaKnown RBP26.83■■□□□ 1.89
SIX4-203ENST00000556952 TMEM266Q2M3C6 531 aa26.83■■□□□ 1.89
SIX4-203ENST00000556952 PCNX4Q63HM2 1172 aa26.83■■□□□ 1.89
SIX4-203ENST00000556952 SHCBP1Q8NEM2 672 aa26.83■■□□□ 1.89
SIX4-203ENST00000556952 NUP62CLQ9H1M0 184 aa26.83■■□□□ 1.89
SIX4-203ENST00000556952 PXMP2Q9NR77 195 aa26.83■■□□□ 1.89
SIX4-203ENST00000556952 FAM86B1E9PN63 330 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 FAM86B2P0C5J1 330 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 SYKP43405 635 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 FXR2P51116 673 aaKnown RBP eCLIP26.82■■□□□ 1.88
SIX4-203ENST00000556952 SETQ01105 290 aaPredicted RBP26.82■■□□□ 1.88
SIX4-203ENST00000556952 ZSCAN23Q3MJ62 389 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 PRR16Q569H4 304 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 SPECC1Q5M775 1068 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 SLFN12Q8IYM2 578 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 LENG9Q96B70 501 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 TAAR1Q96RJ0 339 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 RMDN3Q96TC7 470 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 RAB34Q9BZG1 259 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 CLSTN2Q9H4D0 955 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 MROH8Q9H579 483 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 KCNH3Q9ULD8 1083 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 CENPFP49454 3210 aa26.82■■□□□ 1.88
SIX4-203ENST00000556952 LETM1O95202 739 aaPredicted RBP26.81■■□□□ 1.88
SIX4-203ENST00000556952 ERCC3P19447 782 aa26.81■■□□□ 1.88
SIX4-203ENST00000556952 FCGRTP55899 365 aa26.81■■□□□ 1.88
SIX4-203ENST00000556952 CCNA1P78396 465 aa26.81■■□□□ 1.88
SIX4-203ENST00000556952 XRRA1Q6P2D8 792 aa26.81■■□□□ 1.88
SIX4-203ENST00000556952 ANKRD35Q8N283 1001 aa26.81■■□□□ 1.88
SIX4-203ENST00000556952 SYMPKQ92797 1274 aaKnown RBP26.81■■□□□ 1.88
SIX4-203ENST00000556952 IGLV3-22A0A075B6J6 115 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 TXLNAP40222 546 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 CEP55Q53EZ4 464 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 ARHGEF16Q5VV41 709 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 HAS1Q92839 578 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 TIGD1Q96MW7 591 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 MCOLN1Q9GZU1 580 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 MARCH6O60337 910 aa26.8■■□□□ 1.88
SIX4-203ENST00000556952 ZNF202O95125 648 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms