RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 CHURC1Q8WUH1 139 aa14.96□□□□□ -0.01
PSEN1-219ENST00000556951 CHMP4CQ96CF2 233 aa14.96□□□□□ -0.01
PSEN1-219ENST00000556951 GMCL1Q96IK5 515 aa14.96□□□□□ -0.01
PSEN1-219ENST00000556951 POLR3EQ9NVU0 708 aa14.96□□□□□ -0.01
PSEN1-219ENST00000556951 MYH7P12883 1935 aa14.96□□□□□ -0.02
PSEN1-219ENST00000556951 PTPRSQ13332 1948 aa14.96□□□□□ -0.02
PSEN1-219ENST00000556951 FASNP49327 2511 aaKnown RBP14.95□□□□□ -0.02
PSEN1-219ENST00000556951 SCN10AQ9Y5Y9 1956 aa14.95□□□□□ -0.02
PSEN1-219ENST00000556951 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
PSEN1-219ENST00000556951 MYL3P08590 195 aa14.95□□□□□ -0.02
PSEN1-219ENST00000556951 MCCP23508 829 aa14.95□□□□□ -0.02
PSEN1-219ENST00000556951 STAT2P52630 851 aa14.95□□□□□ -0.02
PSEN1-219ENST00000556951 VCPP55072 806 aaKnown RBP14.95□□□□□ -0.02
PSEN1-219ENST00000556951 ST3GAL2Q16842 350 aa14.95□□□□□ -0.02
PSEN1-219ENST00000556951 TMCO2Q7Z6W1 182 aaPredicted RBP14.95□□□□□ -0.02
PSEN1-219ENST00000556951 RNF135Q8IUD6 432 aa14.95□□□□□ -0.02
PSEN1-219ENST00000556951 ADSSL1Q8N142 457 aa14.95□□□□□ -0.02
PSEN1-219ENST00000556951 CTAGE1Q96RT6 745 aa14.95□□□□□ -0.02
PSEN1-219ENST00000556951 WDR11Q9BZH6 1224 aa14.95□□□□□ -0.02
PSEN1-219ENST00000556951 TRIM6-TRIM34B2RNG4 842 aa14.94□□□□□ -0.02
PSEN1-219ENST00000556951 KIF28PB7ZC32 967 aa14.94□□□□□ -0.02
PSEN1-219ENST00000556951 BAATQ14032 418 aaPredicted RBP14.94□□□□□ -0.02
PSEN1-219ENST00000556951 TCTN1Q2MV58 587 aa14.94□□□□□ -0.02
PSEN1-219ENST00000556951 RCSD1Q6JBY9 416 aa14.94□□□□□ -0.02
PSEN1-219ENST00000556951 CASC1Q6TDU7 716 aa14.94□□□□□ -0.02
PSEN1-219ENST00000556951 NSMFQ6X4W1 530 aa14.94□□□□□ -0.02
PSEN1-219ENST00000556951 KCTD1Q719H9 257 aa14.94□□□□□ -0.02
PSEN1-219ENST00000556951 RASGRP2Q7LDG7 609 aa14.94□□□□□ -0.02
PSEN1-219ENST00000556951 MTG1Q9BT17 334 aaPredicted RBP14.94□□□□□ -0.02
PSEN1-219ENST00000556951 SUGCTQ9HAC7 445 aa14.94□□□□□ -0.02
PSEN1-219ENST00000556951 PRR12Q9ULL5 1215 aa14.94□□□□□ -0.02
PSEN1-219ENST00000556951 PLIN4Q96Q06 1357 aa14.94□□□□□ -0.02
PSEN1-219ENST00000556951 AVPR2P30518 371 aa14.93□□□□□ -0.02
PSEN1-219ENST00000556951 TFAP4Q01664 338 aa14.93□□□□□ -0.02
PSEN1-219ENST00000556951 NFRKBQ6P4R8 1299 aa14.93□□□□□ -0.02
PSEN1-219ENST00000556951 IFNL3Q8IZI9 196 aa14.93□□□□□ -0.02
PSEN1-219ENST00000556951 RETREG2Q8NC44 543 aa14.93□□□□□ -0.02
PSEN1-219ENST00000556951 COPS5Q92905 334 aa14.93□□□□□ -0.02
PSEN1-219ENST00000556951 FTOQ9C0B1 505 aaKnown RBP eCLIP14.93□□□□□ -0.02
PSEN1-219ENST00000556951 FAM208BQ5VWN6 2430 aa14.92□□□□□ -0.02
PSEN1-219ENST00000556951 A6NJR5 290 aa14.92□□□□□ -0.02
PSEN1-219ENST00000556951 PATL2C9JE40 543 aaKnown RBP14.92□□□□□ -0.02
PSEN1-219ENST00000556951 M0R2C6 588 aa14.92□□□□□ -0.02
PSEN1-219ENST00000556951 GPAA1O43292 621 aa14.92□□□□□ -0.02
PSEN1-219ENST00000556951 SEC24BO95487 1268 aa14.92□□□□□ -0.02
PSEN1-219ENST00000556951 SLC1A4P43007 532 aa14.92□□□□□ -0.02
PSEN1-219ENST00000556951 ALDH5A1P51649 535 aaPredicted RBP14.92□□□□□ -0.02
PSEN1-219ENST00000556951 NUBP1P53384 320 aa14.92□□□□□ -0.02
PSEN1-219ENST00000556951 WDR5P61964 334 aaKnown RBP14.92□□□□□ -0.02
PSEN1-219ENST00000556951 PTPN11Q06124 597 aaPredicted RBP14.92□□□□□ -0.02
PSEN1-219ENST00000556951 FAM47CQ5HY64 1035 aa14.92□□□□□ -0.02
PSEN1-219ENST00000556951 KBTBD3Q8NAB2 608 aa14.92□□□□□ -0.02
PSEN1-219ENST00000556951 APPBP2Q92624 585 aa14.92□□□□□ -0.02
PSEN1-219ENST00000556951 RILPL2Q969X0 211 aa14.92□□□□□ -0.02
PSEN1-219ENST00000556951 POP1Q99575 1024 aaKnown RBP14.92□□□□□ -0.02
PSEN1-219ENST00000556951 UPF2Q9HAU5 1272 aaKnown RBP14.92□□□□□ -0.02
PSEN1-219ENST00000556951 IL17RBQ9NRM6 502 aa14.92□□□□□ -0.02
PSEN1-219ENST00000556951 RNF113AO15541 343 aaKnown RBP14.91□□□□□ -0.02
PSEN1-219ENST00000556951 BAIAP3O94812 1187 aa14.91□□□□□ -0.02
PSEN1-219ENST00000556951 ICAM1P05362 532 aa14.91□□□□□ -0.02
PSEN1-219ENST00000556951 CPT1AP50416 773 aa14.91□□□□□ -0.02
PSEN1-219ENST00000556951 ERVK-21P61565 698 aa14.91□□□□□ -0.02
PSEN1-219ENST00000556951 DEFB103AP81534 67 aa14.91□□□□□ -0.02
PSEN1-219ENST00000556951 OR6J1Q8NGC5 347 aa14.91□□□□□ -0.02
PSEN1-219ENST00000556951 NKD2Q969F2 451 aaPredicted RBP14.91□□□□□ -0.02
PSEN1-219ENST00000556951 EVI5LQ96CN4 794 aa14.91□□□□□ -0.02
PSEN1-219ENST00000556951 INCENPQ9NQS7 918 aa14.91□□□□□ -0.02
PSEN1-219ENST00000556951 RALYQ9UKM9 306 aaKnown RBP14.91□□□□□ -0.02
PSEN1-219ENST00000556951 SIP14410 1827 aa14.91□□□□□ -0.02
PSEN1-219ENST00000556951 TRIP12Q14669 1992 aaPredicted RBP14.91□□□□□ -0.02
PSEN1-219ENST00000556951 LOC102724159A0A0B4J2E5 919 aa14.9□□□□□ -0.02
PSEN1-219ENST00000556951 NFIBO00712 420 aa14.9□□□□□ -0.02
PSEN1-219ENST00000556951 TSPY3P0CV98 308 aa14.9□□□□□ -0.02
PSEN1-219ENST00000556951 TSPY8P0CW00 308 aa14.9□□□□□ -0.02
PSEN1-219ENST00000556951 NOVP48745 357 aa14.9□□□□□ -0.02
PSEN1-219ENST00000556951 TDO2P48775 406 aa14.9□□□□□ -0.02
PSEN1-219ENST00000556951 IKQ13123 557 aaPredicted RBP14.9□□□□□ -0.02
PSEN1-219ENST00000556951 BFSP2Q13515 415 aa14.9□□□□□ -0.02
PSEN1-219ENST00000556951 PWP2Q15269 919 aaKnown RBP14.9□□□□□ -0.02
PSEN1-219ENST00000556951 TTBK2Q6IQ55 1244 aa14.9□□□□□ -0.02
PSEN1-219ENST00000556951 CLEC4DQ8WXI8 215 aa14.9□□□□□ -0.02
PSEN1-219ENST00000556951 DHX38Q92620 1227 aaKnown RBP14.9□□□□□ -0.02
PSEN1-219ENST00000556951 SEC62Q99442 399 aaKnown RBP14.9□□□□□ -0.02
PSEN1-219ENST00000556951 ZNF287Q9HBT7 754 aa14.9□□□□□ -0.02
PSEN1-219ENST00000556951 GPHNQ9NQX3 736 aaPredicted RBP14.9□□□□□ -0.02
PSEN1-219ENST00000556951 CCPG1Q9ULG6 757 aa14.9□□□□□ -0.02
PSEN1-219ENST00000556951 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.9□□□□□ -0.02
PSEN1-219ENST00000556951 LINC01553A4QN01 128 aa14.89□□□□□ -0.03
PSEN1-219ENST00000556951 NMT2O60551 498 aa14.89□□□□□ -0.03
PSEN1-219ENST00000556951 KPNA6O60684 536 aa14.89□□□□□ -0.03
PSEN1-219ENST00000556951 CXCL10P02778 98 aa14.89□□□□□ -0.03
PSEN1-219ENST00000556951 GNAT2P19087 354 aa14.89□□□□□ -0.03
PSEN1-219ENST00000556951 EDNRBP24530 442 aa14.89□□□□□ -0.03
PSEN1-219ENST00000556951 CHMLP26374 656 aa14.89□□□□□ -0.03
PSEN1-219ENST00000556951 ZXDAP98168 799 aa14.89□□□□□ -0.03
PSEN1-219ENST00000556951 PUM1Q14671 1186 aaKnown RBP eCLIP14.89□□□□□ -0.03
PSEN1-219ENST00000556951 LRRFIP1Q32MZ4 808 aaKnown RBP14.89□□□□□ -0.03
PSEN1-219ENST00000556951 BTNL9Q6UXG8 535 aa14.89□□□□□ -0.03
PSEN1-219ENST00000556951 RANBP17Q9H2T7 1088 aaKnown RBP14.89□□□□□ -0.03
PSEN1-219ENST00000556951 ADD3Q9UEY8 706 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms