RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 MAFAQ8NHW3 353 aaPredicted RBP12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 ZFP91Q96JP5 570 aaPredicted RBP12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 ALG1Q9BT22 464 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 MYL10Q9BUA6 226 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 PBX4Q9BYU1 374 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 WNT8AQ9H1J5 351 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 ZNF576Q9H609 170 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 RIOX1Q9H6W3 641 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 ANO2Q9NQ90 1003 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 BAZ2BQ9UIF8 2168 aaKnown RBP12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 KIF5BP33176 963 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 MCM5P33992 734 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 PBX2P40425 430 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 ANTXR2P58335 489 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 PTPN11Q06124 597 aaPredicted RBP12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 TROAPQ12815 778 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 TRIP12Q14669 1992 aaPredicted RBP12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 PGM5Q15124 567 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 PTGISQ16647 500 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 MB21D2Q8IYB1 491 aaPredicted RBP12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 ZNF654Q8IZM8 581 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 SAMD3Q8N6K7 520 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 IGDCC4Q8TDY8 1250 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 HERVK_113Q902F9 699 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 MTMR8Q96EF0 704 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 RRP36Q96EU6 259 aaKnown RBP12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 PDCD2LQ9BRP1 358 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 FTOQ9C0B1 505 aaKnown RBP eCLIP12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 CXXC1Q9P0U4 656 aaPredicted RBP12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 SEC63Q9UGP8 760 aaKnown RBP12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 DDX41Q9UJV9 622 aaKnown RBP12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 SCN10AQ9Y5Y9 1956 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 SLC4A7Q9Y6M7 1214 aa12.24□□□□□ -0.45
SPTLC2-205ENST00000556607 OPLAHO14841 1288 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 CYTH3O43739 400 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 ACTN1P12814 892 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 CCND2P30279 289 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 ARHGAP1Q07960 439 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 BFSP2Q13515 415 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 LAMC2Q13753 1193 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 GRIN2CQ14957 1233 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 RAB30Q15771 203 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 KCNV1Q6PIU1 500 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 TMTC2Q8N394 836 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 CCDC155Q8N6L0 562 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 C7orf31Q8N865 590 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 SMARCC2Q8TAQ2 1214 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 CUL5Q93034 780 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 GAS2L1Q99501 681 aaPredicted RBP12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 ESYT1Q9BSJ8 1104 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 KATNAL1Q9BW62 490 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 MLXIPQ9HAP2 919 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 SLC28A3Q9HAS3 691 aa12.23□□□□□ -0.45
SPTLC2-205ENST00000556607 COL6A3P12111 3177 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 SLC27A2O14975 620 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 DDAH1O94760 285 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 GGPS1O95749 300 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 PFKMP08237 780 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 RXRAP19793 462 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 RABGGTBP53611 331 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 SLC35G1Q2M3R5 365 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 CREB3L3Q68CJ9 461 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 CENPQQ7L2Z9 268 aaPredicted RBP12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 SKAP1Q86WV1 359 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 RAB11FIP4Q86YS3 637 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 CCDC82Q8N4S0 544 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 PPM1EQ8WY54 764 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 TMEM87BQ96K49 555 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 SPATA33Q96N06 139 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 LRRC2Q9BYS8 371 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 LSG1Q9H089 658 aaKnown RBP12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 NKX2-4Q9H2Z4 354 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 LY9Q9HBG7 655 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 RTEL1Q9NZ71 1219 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 TANC1Q9C0D5 1861 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 DOCK5Q9H7D0 1870 aa12.22□□□□□ -0.45
SPTLC2-205ENST00000556607 LAMA2P24043 3122 aaKnown RBP12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 IQCF3P0C7M6 154 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 ZNF286BP0CG31 522 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 CALM1P0DP23 149 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 CALM2P0DP24 149 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 CALM3P0DP25 149 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 IGFBP4P22692 258 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 PSEN2P49810 448 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 GNAQP50148 359 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 MFSD10Q14728 455 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 KIAA0753Q2KHM9 967 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 GNPTABQ3T906 1256 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 RASIP1Q5U651 963 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 RNF20Q5VTR2 975 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 GDF6Q6KF10 455 aaPredicted RBP12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 SYNE3Q6ZMZ3 975 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 VSIG10LQ86VR7 867 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 CMTR1Q8N1G2 835 aaKnown RBP12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 IL31RAQ8NI17 732 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 PPTC7Q8NI37 304 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 PRDM12Q9H4Q4 367 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 HDAC6Q9UBN7 1215 aa12.21□□□□□ -0.45
SPTLC2-205ENST00000556607 SLC12A7Q9Y666 1083 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms