RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ADORA1P30542 326 aa10.21□□□□□ -0.78
PRIM1-208ENST00000552590 NKX3-2P78367 333 aa10.21□□□□□ -0.78
PRIM1-208ENST00000552590 CALD1Q05682 793 aaKnown RBP10.21□□□□□ -0.78
PRIM1-208ENST00000552590 RSPO4Q2I0M5 234 aaPredicted RBP10.21□□□□□ -0.78
PRIM1-208ENST00000552590 CCDC102BQ68D86 513 aa10.21□□□□□ -0.78
PRIM1-208ENST00000552590 MAMDC4Q6UXC1 1216 aa10.21□□□□□ -0.78
PRIM1-208ENST00000552590 NOL8Q76FK4 1167 aaKnown RBP10.21□□□□□ -0.78
PRIM1-208ENST00000552590 MSL3Q8N5Y2 521 aaKnown RBP10.21□□□□□ -0.78
PRIM1-208ENST00000552590 EHBP1Q8NDI1 1231 aa10.21□□□□□ -0.78
PRIM1-208ENST00000552590 NSUN4Q96CB9 384 aaKnown RBP10.21□□□□□ -0.78
PRIM1-208ENST00000552590 TNKSO95271 1327 aa10.21□□□□□ -0.78
PRIM1-208ENST00000552590 FLT1P17948 1338 aa10.21□□□□□ -0.78
PRIM1-208ENST00000552590 CACNA1FO60840 1977 aa10.2□□□□□ -0.78
PRIM1-208ENST00000552590 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.2□□□□□ -0.78
PRIM1-208ENST00000552590 TBX10O75333 385 aa10.2□□□□□ -0.78
PRIM1-208ENST00000552590 SUPT20HL2P0C7V6 817 aa10.2□□□□□ -0.78
PRIM1-208ENST00000552590 GSTO1P78417 241 aa10.2□□□□□ -0.78
PRIM1-208ENST00000552590 CBX2Q14781 532 aaPredicted RBP10.2□□□□□ -0.78
PRIM1-208ENST00000552590 FSCN1Q16658 493 aaKnown RBP10.2□□□□□ -0.78
PRIM1-208ENST00000552590 EPC2Q52LR7 807 aa10.2□□□□□ -0.78
PRIM1-208ENST00000552590 KIAA1755Q5JYT7 1200 aa10.2□□□□□ -0.78
PRIM1-208ENST00000552590 MRPL14Q6P1L8 145 aaKnown RBP10.2□□□□□ -0.78
PRIM1-208ENST00000552590 GPIHBP1Q8IV16 184 aa10.2□□□□□ -0.78
PRIM1-208ENST00000552590 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.2□□□□□ -0.78
PRIM1-208ENST00000552590 SEZ6LQ9BYH1 1024 aa10.2□□□□□ -0.78
PRIM1-208ENST00000552590 CD207Q9UJ71 328 aa10.2□□□□□ -0.78
PRIM1-208ENST00000552590 HELZ2Q9BYK8 2649 aaKnown RBP10.2□□□□□ -0.78
PRIM1-208ENST00000552590 MYO10Q9HD67 2058 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 TANC1Q9C0D5 1861 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 A0A1W2PRG0 241 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 NCK2O43639 380 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 GTF2F1P35269 517 aaKnown RBP eCLIP10.19□□□□□ -0.78
PRIM1-208ENST00000552590 HYAL1Q12794 435 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 GPM6BQ13491 265 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 ABCB5Q2M3G0 1257 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 TATDN1Q6P1N9 297 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 TBC1D9Q6ZT07 1266 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 ATG9AQ7Z3C6 839 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 RIOX2Q8IUF8 465 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 RETREG2Q8NC44 543 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 USB1Q9BQ65 265 aaKnown RBP10.19□□□□□ -0.78
PRIM1-208ENST00000552590 ABHD16BQ9H3Z7 469 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 AATFQ9NY61 560 aaKnown RBP eCLIP10.19□□□□□ -0.78
PRIM1-208ENST00000552590 PCDHGC5Q9Y5F6 944 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 ATG2AQ2TAZ0 1938 aa10.19□□□□□ -0.78
PRIM1-208ENST00000552590 CNOT1A5YKK6 2376 aaKnown RBP10.19□□□□□ -0.78
PRIM1-208ENST00000552590 SMG1Q96Q15 3661 aaKnown RBP10.19□□□□□ -0.78
PRIM1-208ENST00000552590 H3BNC9 293 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 LINC01565O15544 149 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 ALDH1L1O75891 902 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 HLA-DOAP06340 250 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 GUCY1A2P33402 732 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 SLC4A10Q6U841 1118 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 TLK2Q86UE8 772 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 PPP1R13LQ8WUF5 828 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 RPGRIP1Q96KN7 1286 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 HINFPQ9BQA5 517 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 IGFLR1Q9H665 355 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 RAI14Q9P0K7 980 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 NBEAQ8NFP9 2946 aa10.18□□□□□ -0.78
PRIM1-208ENST00000552590 DSPP15924 2871 aaKnown RBP10.18□□□□□ -0.78
PRIM1-208ENST00000552590 DYNC1LI2O43237 492 aaPredicted RBP10.17□□□□□ -0.78
PRIM1-208ENST00000552590 LMNAP02545 664 aaKnown RBP10.17□□□□□ -0.78
PRIM1-208ENST00000552590 ICAM3P32942 547 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 STAT3P40763 770 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 TNFAIP2Q03169 654 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 SEPT2Q15019 361 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 PTPN21Q16825 1174 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 TCTN1Q2MV58 587 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 CERKLQ49MI3 558 aaPredicted RBP10.17□□□□□ -0.78
PRIM1-208ENST00000552590 DDX11Q96FC9 970 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 PURBQ96QR8 312 aaKnown RBP10.17□□□□□ -0.78
PRIM1-208ENST00000552590 SRCIN1Q9C0H9 1055 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 PDS5AQ29RF7 1337 aaKnown RBP10.17□□□□□ -0.78
PRIM1-208ENST00000552590 PARP14Q460N5 1801 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 IGF2RP11717 2491 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 ZEB2O60315 1214 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 GPNMBQ14956 572 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 ATF7IPQ6VMQ6 1270 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 ARMCX2Q7L311 632 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 SPICE1Q8N0Z3 855 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 DCLK2Q8N568 766 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 NOL10Q9BSC4 688 aaKnown RBP10.17□□□□□ -0.78
PRIM1-208ENST00000552590 KATNBL1Q9H079 304 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 AP5M1Q9H0R1 490 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 CABP5Q9NP86 173 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 INCENPQ9NQS7 918 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 CEP126Q9P2H0 1117 aa10.17□□□□□ -0.78
PRIM1-208ENST00000552590 GNEQ9Y223 722 aaKnown RBP10.17□□□□□ -0.78
PRIM1-208ENST00000552590 FOCADQ5VW36 1801 aa10.16□□□□□ -0.78
PRIM1-208ENST00000552590 DNAJC25-GNG10A0A024R161 153 aa10.16□□□□□ -0.78
PRIM1-208ENST00000552590 APAF1O14727 1248 aa10.16□□□□□ -0.78
PRIM1-208ENST00000552590 EYA4O95677 639 aa10.16□□□□□ -0.78
PRIM1-208ENST00000552590 RFX5P48382 616 aaPredicted RBP10.16□□□□□ -0.78
PRIM1-208ENST00000552590 RRP1P56182 461 aaKnown RBP10.16□□□□□ -0.78
PRIM1-208ENST00000552590 COL9A3Q14050 684 aaPredicted RBP10.16□□□□□ -0.78
PRIM1-208ENST00000552590 FAM47CQ5HY64 1035 aa10.16□□□□□ -0.78
PRIM1-208ENST00000552590 KIAA0319Q5VV43 1072 aa10.16□□□□□ -0.78
PRIM1-208ENST00000552590 PI16Q6UXB8 463 aa10.16□□□□□ -0.78
PRIM1-208ENST00000552590 MSLNLQ96KJ4 702 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms