RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 AFG1LQ8WV93 481 aa18.79■□□□□ 0.6
CALCOCO1-220ENST00000552282 UBAC1Q9BSL1 405 aa18.79■□□□□ 0.6
CALCOCO1-220ENST00000552282 AMNQ9BXJ7 453 aa18.79■□□□□ 0.6
CALCOCO1-220ENST00000552282 IL25Q9H293 177 aa18.79■□□□□ 0.6
CALCOCO1-220ENST00000552282 PRDM6Q9NQX0 595 aa18.79■□□□□ 0.6
CALCOCO1-220ENST00000552282 PXMP2Q9NR77 195 aa18.79■□□□□ 0.6
CALCOCO1-220ENST00000552282 DDX41Q9UJV9 622 aaKnown RBP18.79■□□□□ 0.6
CALCOCO1-220ENST00000552282 TRIP12Q14669 1992 aaPredicted RBP18.79■□□□□ 0.6
CALCOCO1-220ENST00000552282 PALM3A6NDB9 673 aaPredicted RBP18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 HAS3O00219 553 aa18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 CXCL10P02778 98 aa18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 CASTP20810 708 aaKnown RBP18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 RABGGTBP53611 331 aa18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 TMEM67Q5HYA8 995 aa18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 IFIT1BQ5T764 474 aaKnown RBP18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 STOX1Q6ZVD7 989 aa18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 RETREG2Q8NC44 543 aa18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 PPTC7Q8NI37 304 aa18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 ASB2Q96Q27 587 aa18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 KATNAL1Q9BW62 490 aa18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 GTF2IRD1Q9UHL9 959 aa18.78■□□□□ 0.6
CALCOCO1-220ENST00000552282 ZBBXA8MT70 800 aa18.77■□□□□ 0.6
CALCOCO1-220ENST00000552282 ZBTB5O15062 677 aa18.77■□□□□ 0.6
CALCOCO1-220ENST00000552282 NR3C2P08235 984 aa18.77■□□□□ 0.6
CALCOCO1-220ENST00000552282 TRAF1Q13077 416 aa18.77■□□□□ 0.6
CALCOCO1-220ENST00000552282 DGKDQ16760 1214 aa18.77■□□□□ 0.6
CALCOCO1-220ENST00000552282 LY6KQ17RY6 165 aa18.77■□□□□ 0.6
CALCOCO1-220ENST00000552282 KCNV1Q6PIU1 500 aa18.77■□□□□ 0.6
CALCOCO1-220ENST00000552282 EXOC6Q8TAG9 804 aa18.77■□□□□ 0.6
CALCOCO1-220ENST00000552282 PDCD2LQ9BRP1 358 aa18.77■□□□□ 0.6
CALCOCO1-220ENST00000552282 MAD2L2Q9UI95 211 aa18.77■□□□□ 0.6
CALCOCO1-220ENST00000552282 FRMPD4Q14CM0 1322 aa18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 KLRF2D3W0D1 207 aa18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 PPP1R11O60927 126 aaPredicted RBP18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 RGS20O76081 388 aa18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 LAMC2Q13753 1193 aa18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 GPNMBQ14956 572 aa18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 PTGISQ16647 500 aa18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 ARHGEF16Q5VV41 709 aa18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 GDF6Q6KF10 455 aaPredicted RBP18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 DEFB128Q7Z7B8 93 aa18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 STAG2Q8N3U4 1231 aa18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 DHX38Q92620 1227 aaKnown RBP18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 RIOX1Q9H6W3 641 aa18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 PRRC2BQ5JSZ5 2229 aaKnown RBP18.76■□□□□ 0.59
CALCOCO1-220ENST00000552282 TNFRSF10AO00220 468 aa18.75■□□□□ 0.59
CALCOCO1-220ENST00000552282 CA3P07451 260 aa18.75■□□□□ 0.59
CALCOCO1-220ENST00000552282 TGFB3P10600 412 aa18.75■□□□□ 0.59
CALCOCO1-220ENST00000552282 GSPT1P15170 499 aaKnown RBP18.75■□□□□ 0.59
CALCOCO1-220ENST00000552282 MYOGP15173 224 aa18.75■□□□□ 0.59
CALCOCO1-220ENST00000552282 SELPP16109 830 aa18.75■□□□□ 0.59
CALCOCO1-220ENST00000552282 MRPS5P82675 430 aaKnown RBP18.75■□□□□ 0.59
CALCOCO1-220ENST00000552282 TTC22Q5TAA0 569 aa18.75■□□□□ 0.59
CALCOCO1-220ENST00000552282 SEPT14Q6ZU15 432 aa18.75■□□□□ 0.59
CALCOCO1-220ENST00000552282 HERC6Q8IVU3 1022 aa18.75■□□□□ 0.59
CALCOCO1-220ENST00000552282 NOD1Q9Y239 953 aa18.75■□□□□ 0.59
CALCOCO1-220ENST00000552282 COL4A4P53420 1690 aaPredicted RBP18.75■□□□□ 0.59
CALCOCO1-220ENST00000552282 MYH7BA7E2Y1 1941 aa18.74■□□□□ 0.59
CALCOCO1-220ENST00000552282 CFBP00751 764 aa18.74■□□□□ 0.59
CALCOCO1-220ENST00000552282 EIF2AK2P19525 551 aaKnown RBP18.74■□□□□ 0.59
CALCOCO1-220ENST00000552282 HOXC8P31273 242 aa18.74■□□□□ 0.59
CALCOCO1-220ENST00000552282 GRM4Q14833 912 aa18.74■□□□□ 0.59
CALCOCO1-220ENST00000552282 SLC35G1Q2M3R5 365 aa18.74■□□□□ 0.59
CALCOCO1-220ENST00000552282 TRIM71Q2Q1W2 868 aaKnown RBP18.74■□□□□ 0.59
CALCOCO1-220ENST00000552282 CYB5R4Q7L1T6 521 aa18.74■□□□□ 0.59
CALCOCO1-220ENST00000552282 LRRC8DQ7L1W4 858 aa18.74■□□□□ 0.59
CALCOCO1-220ENST00000552282 VSIG10LQ86VR7 867 aa18.74■□□□□ 0.59
CALCOCO1-220ENST00000552282 MRVI1Q9Y6F6 885 aa18.74■□□□□ 0.59
CALCOCO1-220ENST00000552282 COL4A6Q14031 1691 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 PPFIA4O75335 1185 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 CYP21A2P08686 494 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 IGFBP4P22692 258 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 PDE4AP27815 886 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 PSEN2P49810 448 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 TAP1Q03518 808 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 TROAPQ12815 778 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 PTK7Q13308 1070 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 MYSM1Q5VVJ2 828 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 CNKSR3Q6P9H4 555 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 TRAF7Q6Q0C0 670 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 MTCH2Q9Y6C9 303 aa18.73■□□□□ 0.59
CALCOCO1-220ENST00000552282 DHX16O60231 1041 aaKnown RBP18.72■□□□□ 0.59
CALCOCO1-220ENST00000552282 EFCAB14O75071 495 aa18.72■□□□□ 0.59
CALCOCO1-220ENST00000552282 CKBP12277 381 aa18.72■□□□□ 0.59
CALCOCO1-220ENST00000552282 WDR5P61964 334 aaKnown RBP18.72■□□□□ 0.59
CALCOCO1-220ENST00000552282 PGM5Q15124 567 aa18.72■□□□□ 0.59
CALCOCO1-220ENST00000552282 MAP3K14Q99558 947 aa18.72■□□□□ 0.59
CALCOCO1-220ENST00000552282 TSPYL2Q9H2G4 693 aaPredicted RBP18.72■□□□□ 0.59
CALCOCO1-220ENST00000552282 HDAC6Q9UBN7 1215 aa18.72■□□□□ 0.59
CALCOCO1-220ENST00000552282 PCDHA1Q9Y5I3 950 aa18.72■□□□□ 0.59
CALCOCO1-220ENST00000552282 U3KPZ7 1027 aaPredicted RBP18.72■□□□□ 0.59
CALCOCO1-220ENST00000552282 KIF28PB7ZC32 967 aa18.71■□□□□ 0.59
CALCOCO1-220ENST00000552282 CYTH3O43739 400 aa18.71■□□□□ 0.59
CALCOCO1-220ENST00000552282 STAM2O75886 525 aa18.71■□□□□ 0.59
CALCOCO1-220ENST00000552282 ARHGEF15O94989 841 aa18.71■□□□□ 0.59
CALCOCO1-220ENST00000552282 TRDNQ13061 729 aa18.71■□□□□ 0.59
CALCOCO1-220ENST00000552282 MKRN4PQ13434 485 aaPredicted RBP18.71■□□□□ 0.59
CALCOCO1-220ENST00000552282 MFSD10Q14728 455 aa18.71■□□□□ 0.59
CALCOCO1-220ENST00000552282 CELF3Q5SZQ8 465 aaKnown RBP18.71■□□□□ 0.59
CALCOCO1-220ENST00000552282 DHX37Q8IY37 1157 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms