RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 GNA11P29992 359 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 ADCYAP1R1P41586 468 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 PGM5Q15124 567 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 RNF180Q86T96 592 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 VSIG10LQ86VR7 867 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 FBXO16Q8IX29 292 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-225ENST00000551845 FAM161BQ96MY7 647 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 TBC1D32Q96NH3 1257 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 PDCD2LQ9BRP1 358 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 WDR11Q9BZH6 1224 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 RIC8AQ9NPQ8 531 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 Q9Y3F1 56 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 DDX49Q9Y6V7 483 aaKnown RBP12.19□□□□□ -0.46
PTCH1-225ENST00000551845 RBM47A0AV96 593 aaKnown RBP12.18□□□□□ -0.46
PTCH1-225ENST00000551845 DYNC1LI2O43237 492 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-225ENST00000551845 SMPD1P17405 629 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 ADCY7P51828 1080 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 TTLL4Q14679 1199 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 MCTP2Q6DN12 878 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 TYW1BQ6NUM6 668 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 XRRA1Q6P2D8 792 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 SEPT14Q6ZU15 432 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 NECAB1Q8N987 351 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 CCDC148Q8NFR7 591 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 SCFD2Q8WU76 684 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 WASF1Q92558 559 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 ZMYND12Q9H0C1 365 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 AP5M1Q9H0R1 490 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 EHMT1Q9H9B1 1298 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 SH3GLB2Q9NR46 395 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 PCDHA6Q9UN73 950 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 PCDHA8Q9Y5H6 950 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 CUL9Q8IWT3 2517 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 PARP14Q460N5 1801 aa12.18□□□□□ -0.46
PTCH1-225ENST00000551845 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-225ENST00000551845 ESYT2A0FGR8 921 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 KBTBD13C9JR72 458 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 DNM1LO00429 736 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 NKRFO15226 690 aaKnown RBP eCLIP12.17□□□□□ -0.46
PTCH1-225ENST00000551845 STAM2O75886 525 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 PGK1P00558 417 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 TXNP10599 105 aaKnown RBP12.17□□□□□ -0.46
PTCH1-225ENST00000551845 XBP1P17861 261 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 CCND2P30279 289 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 NLRP5P59047 1200 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 MDM2Q00987 491 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-225ENST00000551845 LRRC41Q15345 812 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 DUSP28Q4G0W2 176 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 GJC2Q5T442 439 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-225ENST00000551845 KCNV1Q6PIU1 500 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 BICD2Q8TD16 824 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 GUCD1Q96NT3 240 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 SH2B1Q9NRF2 756 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-225ENST00000551845 GNEQ9Y223 722 aaKnown RBP12.17□□□□□ -0.46
PTCH1-225ENST00000551845 A0A0C4DFX4 3053 aa12.17□□□□□ -0.46
PTCH1-225ENST00000551845 PLXNB2O15031 1838 aa12.16□□□□□ -0.46
PTCH1-225ENST00000551845 COL11A1P12107 1806 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-225ENST00000551845 ZEB2O60315 1214 aa12.16□□□□□ -0.46
PTCH1-225ENST00000551845 C6orf222P0C671 652 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-225ENST00000551845 TGFB3P10600 412 aa12.16□□□□□ -0.46
PTCH1-225ENST00000551845 MCM2P49736 904 aa12.16□□□□□ -0.46
PTCH1-225ENST00000551845 GJA9P57773 515 aa12.16□□□□□ -0.46
PTCH1-225ENST00000551845 UBE2SQ16763 222 aa12.16□□□□□ -0.46
PTCH1-225ENST00000551845 GNASQ5JWF2 1037 aa12.16□□□□□ -0.46
PTCH1-225ENST00000551845 NLRX1Q86UT6 975 aa12.16□□□□□ -0.46
PTCH1-225ENST00000551845 FAM177A1Q8N128 213 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-225ENST00000551845 PCSK9Q8NBP7 692 aaKnown RBP12.16□□□□□ -0.46
PTCH1-225ENST00000551845 TSEN34Q9BSV6 310 aaKnown RBP12.16□□□□□ -0.46
PTCH1-225ENST00000551845 SENP6Q9GZR1 1112 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-225ENST00000551845 PRDM6Q9NQX0 595 aa12.16□□□□□ -0.46
PTCH1-225ENST00000551845 RTEL1Q9NZ71 1219 aa12.16□□□□□ -0.46
PTCH1-225ENST00000551845 VPS54Q9P1Q0 977 aa12.16□□□□□ -0.46
PTCH1-225ENST00000551845 ORC3Q9UBD5 711 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-225ENST00000551845 ADAMTS4O75173 837 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 LARGE1O95461 756 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 CTDNEP1O95476 244 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 NKX3-2P78367 333 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 AP3B2Q13367 1082 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 KCNA10Q16322 511 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 GNPTABQ3T906 1256 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 BRDTQ58F21 947 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-225ENST00000551845 ZNF697Q5TEC3 545 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 JAKMIP3Q5VZ66 844 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 PCNX4Q63HM2 1172 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 GALNT17Q6IS24 598 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 TLK2Q86UE8 772 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 KLHDC9Q8NEP7 349 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 LENG1Q96BZ8 264 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-225ENST00000551845 ZFP91Q96JP5 570 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-225ENST00000551845 LLPHQ9BRT6 129 aaKnown RBP12.15□□□□□ -0.46
PTCH1-225ENST00000551845 DDX41Q9UJV9 622 aaKnown RBP12.15□□□□□ -0.46
PTCH1-225ENST00000551845 MRVI1Q9Y6F6 885 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 ZNF236Q9UL36 1845 aa12.15□□□□□ -0.46
PTCH1-225ENST00000551845 STK36Q9NRP7 1315 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 MOXD2PA6NHM9 499 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 MAFGO15525 162 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 ADCY6O43306 1168 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 GH1P01241 217 aa12.14□□□□□ -0.47
PTCH1-225ENST00000551845 ZNF76P36508 570 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms