RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 SESTD1Q86VW0 696 aa26.87■■□□□ 1.89
SMARCD1-209ENST00000550477 SAMD3Q8N6K7 520 aa26.87■■□□□ 1.89
SMARCD1-209ENST00000550477 AFAP1L1Q8TED9 768 aa26.87■■□□□ 1.89
SMARCD1-209ENST00000550477 JMJD4Q9H9V9 463 aa26.87■■□□□ 1.89
SMARCD1-209ENST00000550477 PRUNE2Q8WUY3 3088 aa26.87■■□□□ 1.89
SMARCD1-209ENST00000550477 IGHDP01880 384 aa26.86■■□□□ 1.89
SMARCD1-209ENST00000550477 EIF2AK2P19525 551 aaKnown RBP26.86■■□□□ 1.89
SMARCD1-209ENST00000550477 LAMC2Q13753 1193 aa26.86■■□□□ 1.89
SMARCD1-209ENST00000550477 AAK1Q2M2I8 961 aa26.86■■□□□ 1.89
SMARCD1-209ENST00000550477 KCNV1Q6PIU1 500 aa26.86■■□□□ 1.89
SMARCD1-209ENST00000550477 MICALL1Q8N3F8 863 aa26.86■■□□□ 1.89
SMARCD1-209ENST00000550477 C7orf31Q8N865 590 aa26.86■■□□□ 1.89
SMARCD1-209ENST00000550477 MRVI1Q9Y6F6 885 aa26.86■■□□□ 1.89
SMARCD1-209ENST00000550477 LAMA4Q16363 1823 aa26.86■■□□□ 1.89
SMARCD1-209ENST00000550477 CA3P07451 260 aa26.85■■□□□ 1.89
SMARCD1-209ENST00000550477 NR3C2P08235 984 aa26.85■■□□□ 1.89
SMARCD1-209ENST00000550477 VWCEQ96DN2 955 aa26.85■■□□□ 1.89
SMARCD1-209ENST00000550477 SCN5AQ14524 2016 aa26.85■■□□□ 1.89
SMARCD1-209ENST00000550477 ARHGAP1Q07960 439 aa26.84■■□□□ 1.89
SMARCD1-209ENST00000550477 SKIV2LQ15477 1246 aaKnown RBP26.84■■□□□ 1.89
SMARCD1-209ENST00000550477 DHX37Q8IY37 1157 aaKnown RBP26.84■■□□□ 1.89
SMARCD1-209ENST00000550477 PPP1R13LQ8WUF5 828 aa26.84■■□□□ 1.89
SMARCD1-209ENST00000550477 PXMP2Q9NR77 195 aa26.84■■□□□ 1.89
SMARCD1-209ENST00000550477 DDX41Q9UJV9 622 aaKnown RBP26.84■■□□□ 1.89
SMARCD1-209ENST00000550477 TTC28Q96AY4 2481 aa26.84■■□□□ 1.89
SMARCD1-209ENST00000550477 TRIP12Q14669 1992 aaPredicted RBP26.84■■□□□ 1.89
SMARCD1-209ENST00000550477 ERICH2A1L162 156 aa26.83■■□□□ 1.89
SMARCD1-209ENST00000550477 KLRF2D3W0D1 207 aa26.83■■□□□ 1.89
SMARCD1-209ENST00000550477 SELPP16109 830 aa26.83■■□□□ 1.89
SMARCD1-209ENST00000550477 HERC6Q8IVU3 1022 aa26.83■■□□□ 1.89
SMARCD1-209ENST00000550477 EMID1Q96A84 441 aaPredicted RBP26.83■■□□□ 1.89
SMARCD1-209ENST00000550477 COL20A1Q9P218 1284 aa26.83■■□□□ 1.89
SMARCD1-209ENST00000550477 VCANP13611 3396 aa26.83■■□□□ 1.88
SMARCD1-209ENST00000550477 KIAA1217Q5T5P2 1943 aa26.82■■□□□ 1.88
SMARCD1-209ENST00000550477 GDF6Q6KF10 455 aaPredicted RBP26.82■■□□□ 1.88
SMARCD1-209ENST00000550477 PPTC7Q8NI37 304 aa26.82■■□□□ 1.88
SMARCD1-209ENST00000550477 RUFY2Q8WXA3 655 aa26.82■■□□□ 1.88
SMARCD1-209ENST00000550477 ZBED2Q9BTP6 218 aa26.82■■□□□ 1.88
SMARCD1-209ENST00000550477 PCDHA1Q9Y5I3 950 aa26.82■■□□□ 1.88
SMARCD1-209ENST00000550477 ZBTB5O15062 677 aa26.81■■□□□ 1.88
SMARCD1-209ENST00000550477 MYCLP12524 364 aaPredicted RBP26.81■■□□□ 1.88
SMARCD1-209ENST00000550477 HSD17B4P51659 736 aa26.81■■□□□ 1.88
SMARCD1-209ENST00000550477 LRRC8DQ7L1W4 858 aa26.81■■□□□ 1.88
SMARCD1-209ENST00000550477 ADAMTS19Q8TE59 1207 aa26.81■■□□□ 1.88
SMARCD1-209ENST00000550477 ALG1Q9BT22 464 aa26.81■■□□□ 1.88
SMARCD1-209ENST00000550477 GTF2IRD1Q9UHL9 959 aa26.81■■□□□ 1.88
SMARCD1-209ENST00000550477 TLL1O43897 1013 aa26.8■■□□□ 1.88
SMARCD1-209ENST00000550477 EFCAB14O75071 495 aa26.8■■□□□ 1.88
SMARCD1-209ENST00000550477 POU3F3P20264 500 aaPredicted RBP26.8■■□□□ 1.88
SMARCD1-209ENST00000550477 PSEN2P49810 448 aa26.8■■□□□ 1.88
SMARCD1-209ENST00000550477 KAT2BQ92831 832 aa26.8■■□□□ 1.88
SMARCD1-209ENST00000550477 YTHDC1Q96MU7 727 aaKnown RBP26.8■■□□□ 1.88
SMARCD1-209ENST00000550477 UHRF1Q96T88 793 aaPredicted RBP26.8■■□□□ 1.88
SMARCD1-209ENST00000550477 HDAC6Q9UBN7 1215 aa26.8■■□□□ 1.88
SMARCD1-209ENST00000550477 U3KPZ7 1027 aaPredicted RBP26.8■■□□□ 1.88
SMARCD1-209ENST00000550477 PPFIA4O75335 1185 aa26.79■■□□□ 1.88
SMARCD1-209ENST00000550477 MFSD10Q14728 455 aa26.79■■□□□ 1.88
SMARCD1-209ENST00000550477 SART3Q15020 963 aaKnown RBP26.79■■□□□ 1.88
SMARCD1-209ENST00000550477 CNKSR3Q6P9H4 555 aa26.79■■□□□ 1.88
SMARCD1-209ENST00000550477 STAG2Q8N3U4 1231 aa26.79■■□□□ 1.88
SMARCD1-209ENST00000550477 EXOC6Q8TAG9 804 aa26.79■■□□□ 1.88
SMARCD1-209ENST00000550477 ARNTL2Q8WYA1 636 aa26.79■■□□□ 1.88
SMARCD1-209ENST00000550477 CERS4Q9HA82 394 aa26.79■■□□□ 1.88
SMARCD1-209ENST00000550477 TANC1Q9C0D5 1861 aa26.79■■□□□ 1.88
SMARCD1-209ENST00000550477 TGFB3P10600 412 aa26.78■■□□□ 1.88
SMARCD1-209ENST00000550477 GHRHRQ02643 423 aa26.78■■□□□ 1.88
SMARCD1-209ENST00000550477 PTK7Q13308 1070 aa26.78■■□□□ 1.88
SMARCD1-209ENST00000550477 KIAA0753Q2KHM9 967 aa26.78■■□□□ 1.88
SMARCD1-209ENST00000550477 PDCD2LQ9BRP1 358 aa26.78■■□□□ 1.88
SMARCD1-209ENST00000550477 MYH7BA7E2Y1 1941 aa26.77■■□□□ 1.88
SMARCD1-209ENST00000550477 ABHD14A-ACY1A0A1B0GW23 586 aa26.77■■□□□ 1.88
SMARCD1-209ENST00000550477 GCOM1H8Y6P7 765 aaPredicted RBP26.77■■□□□ 1.88
SMARCD1-209ENST00000550477 POLR2MP0CAP2 368 aa26.77■■□□□ 1.88
SMARCD1-209ENST00000550477 RBL2Q08999 1139 aa26.77■■□□□ 1.88
SMARCD1-209ENST00000550477 SEC23AQ15436 765 aa26.77■■□□□ 1.88
SMARCD1-209ENST00000550477 STOX1Q6ZVD7 989 aa26.77■■□□□ 1.88
SMARCD1-209ENST00000550477 MAD2L2Q9UI95 211 aa26.77■■□□□ 1.88
SMARCD1-209ENST00000550477 MTCH2Q9Y6C9 303 aa26.77■■□□□ 1.88
SMARCD1-209ENST00000550477 PALM3A6NDB9 673 aaPredicted RBP26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 IFIT3O14879 490 aaKnown RBP26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 CKBP12277 381 aa26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 CCND2P30279 289 aa26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 TAP1Q03518 808 aa26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 IKBKEQ14164 716 aa26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 RALYLQ86SE5 291 aaKnown RBP26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 HOMER1Q86YM7 354 aa26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 TET1Q8NFU7 2136 aa26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 MTMR8Q96EF0 704 aa26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 SPATA33Q96N06 139 aa26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 MLXIPQ9HAP2 919 aa26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 COG5Q9UP83 839 aa26.76■■□□□ 1.87
SMARCD1-209ENST00000550477 F2P00734 622 aa26.75■■□□□ 1.87
SMARCD1-209ENST00000550477 PGM5Q15124 567 aa26.75■■□□□ 1.87
SMARCD1-209ENST00000550477 CELF3Q5SZQ8 465 aaKnown RBP26.75■■□□□ 1.87
SMARCD1-209ENST00000550477 MYSM1Q5VVJ2 828 aa26.75■■□□□ 1.87
SMARCD1-209ENST00000550477 VSIG10LQ86VR7 867 aa26.75■■□□□ 1.87
SMARCD1-209ENST00000550477 RFXAPO00287 272 aa26.74■■□□□ 1.87
SMARCD1-209ENST00000550477 WDR5P61964 334 aaKnown RBP26.74■■□□□ 1.87
SMARCD1-209ENST00000550477 PRRC2BQ5JSZ5 2229 aaKnown RBP26.73■■□□□ 1.87
SMARCD1-209ENST00000550477 HAS3O00219 553 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms