RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 CHST3Q7LGC8 479 aa23.06■■□□□ 1.28
GCN1-207ENST00000550471 VSIG10LQ86VR7 867 aa23.06■■□□□ 1.28
GCN1-207ENST00000550471 SESTD1Q86VW0 696 aa23.06■■□□□ 1.28
GCN1-207ENST00000550471 CCDC155Q8N6L0 562 aa23.06■■□□□ 1.28
GCN1-207ENST00000550471 HERVK_113Q902F9 699 aa23.06■■□□□ 1.28
GCN1-207ENST00000550471 CUL5Q93034 780 aa23.06■■□□□ 1.28
GCN1-207ENST00000550471 TRPV6Q9H1D0 765 aa23.06■■□□□ 1.28
GCN1-207ENST00000550471 PITPNM1O00562 1244 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 CYTH3O43739 400 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 ARIH2O95376 493 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 FGBP02675 491 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 MMP3P08254 477 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 CYP2C18P33260 490 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 ARHGAP1Q07960 439 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 BFSP2Q13515 415 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 KRT32Q14532 448 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 NBPF20Q3BBV1 942 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 GNPTABQ3T906 1256 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 XRRA1Q6P2D8 792 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 PPTC7Q8NI37 304 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 SEMA6BQ9H3T3 888 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 SLC12A7Q9Y666 1083 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 TAF6LQ9Y6J9 622 aa23.05■■□□□ 1.28
GCN1-207ENST00000550471 SCN10AQ9Y5Y9 1956 aa23.04■■□□□ 1.28
GCN1-207ENST00000550471 SH2B2O14492 632 aaPredicted RBP23.04■■□□□ 1.28
GCN1-207ENST00000550471 CDC45O75419 566 aa23.04■■□□□ 1.28
GCN1-207ENST00000550471 PARNO95453 639 aaKnown RBP23.04■■□□□ 1.28
GCN1-207ENST00000550471 PGM5Q15124 567 aa23.04■■□□□ 1.28
GCN1-207ENST00000550471 LY6KQ17RY6 165 aa23.04■■□□□ 1.28
GCN1-207ENST00000550471 FAM47CQ5HY64 1035 aa23.04■■□□□ 1.28
GCN1-207ENST00000550471 DHX37Q8IY37 1157 aaKnown RBP23.04■■□□□ 1.28
GCN1-207ENST00000550471 RETREG2Q8NC44 543 aa23.04■■□□□ 1.28
GCN1-207ENST00000550471 AFG1LQ8WV93 481 aa23.04■■□□□ 1.28
GCN1-207ENST00000550471 COPS5Q92905 334 aa23.04■■□□□ 1.28
GCN1-207ENST00000550471 NOD1Q9Y239 953 aa23.04■■□□□ 1.28
GCN1-207ENST00000550471 PPFIA4O75335 1185 aa23.03■■□□□ 1.28
GCN1-207ENST00000550471 HMGB1P09429 215 aaKnown RBP23.03■■□□□ 1.28
GCN1-207ENST00000550471 PTGS1P23219 599 aa23.03■■□□□ 1.28
GCN1-207ENST00000550471 TSGA10IPQ3SY00 556 aa23.03■■□□□ 1.28
GCN1-207ENST00000550471 ZNF365Q70YC5 407 aa23.03■■□□□ 1.28
GCN1-207ENST00000550471 SGMS1Q86VZ5 419 aa23.03■■□□□ 1.28
GCN1-207ENST00000550471 SLC17A8Q8NDX2 589 aa23.03■■□□□ 1.28
GCN1-207ENST00000550471 SENP2Q9HC62 589 aa23.03■■□□□ 1.28
GCN1-207ENST00000550471 PIK3CDO00329 1044 aa23.02■■□□□ 1.28
GCN1-207ENST00000550471 MYCLP12524 364 aaPredicted RBP23.02■■□□□ 1.28
GCN1-207ENST00000550471 RAB30Q15771 203 aa23.02■■□□□ 1.28
GCN1-207ENST00000550471 C16orf59Q7L2K0 433 aa23.02■■□□□ 1.28
GCN1-207ENST00000550471 CAGE1Q8TC20 777 aa23.02■■□□□ 1.28
GCN1-207ENST00000550471 ACTN1P12814 892 aa23.01■■□□□ 1.27
GCN1-207ENST00000550471 HOXA13P31271 388 aaPredicted RBP23.01■■□□□ 1.27
GCN1-207ENST00000550471 SLC35G1Q2M3R5 365 aa23.01■■□□□ 1.27
GCN1-207ENST00000550471 SMARCC2Q8TAQ2 1214 aa23.01■■□□□ 1.27
GCN1-207ENST00000550471 GUCD1Q96NT3 240 aa23.01■■□□□ 1.27
GCN1-207ENST00000550471 NEK1Q96PY6 1258 aa23.01■■□□□ 1.27
GCN1-207ENST00000550471 TRMT13Q9NUP7 481 aaKnown RBP23.01■■□□□ 1.27
GCN1-207ENST00000550471 RBM28Q9NW13 759 aaKnown RBP23.01■■□□□ 1.27
GCN1-207ENST00000550471 KIAA1217Q5T5P2 1943 aa23.01■■□□□ 1.27
GCN1-207ENST00000550471 FRMPD4Q14CM0 1322 aa23.01■■□□□ 1.27
GCN1-207ENST00000550471 HOXD8P13378 290 aaPredicted RBP23■■□□□ 1.27
GCN1-207ENST00000550471 DNAJB2P25686 324 aa23■■□□□ 1.27
GCN1-207ENST00000550471 CELF3Q5SZQ8 465 aaKnown RBP23■■□□□ 1.27
GCN1-207ENST00000550471 FCHSD1Q86WN1 690 aa23■■□□□ 1.27
GCN1-207ENST00000550471 FANCBQ8NB91 859 aa23■■□□□ 1.27
GCN1-207ENST00000550471 CCDC136Q96JN2 1154 aa23■■□□□ 1.27
GCN1-207ENST00000550471 MSRAQ9UJ68 235 aa23■■□□□ 1.27
GCN1-207ENST00000550471 ICAM3P32942 547 aa22.99■■□□□ 1.27
GCN1-207ENST00000550471 RCAN1P53805 252 aa22.99■■□□□ 1.27
GCN1-207ENST00000550471 CCL23P55773 120 aa22.99■■□□□ 1.27
GCN1-207ENST00000550471 NEDD9Q14511 834 aa22.99■■□□□ 1.27
GCN1-207ENST00000550471 MYSM1Q5VVJ2 828 aa22.99■■□□□ 1.27
GCN1-207ENST00000550471 C7orf31Q8N865 590 aa22.99■■□□□ 1.27
GCN1-207ENST00000550471 TIFAQ96CG3 184 aa22.99■■□□□ 1.27
GCN1-207ENST00000550471 WNT8AQ9H1J5 351 aa22.99■■□□□ 1.27
GCN1-207ENST00000550471 MLXIPQ9HAP2 919 aa22.99■■□□□ 1.27
GCN1-207ENST00000550471 F2P00734 622 aa22.98■■□□□ 1.27
GCN1-207ENST00000550471 ACRP10323 421 aa22.98■■□□□ 1.27
GCN1-207ENST00000550471 PTGISQ16647 500 aa22.98■■□□□ 1.27
GCN1-207ENST00000550471 DHX32Q7L7V1 743 aaKnown RBP22.98■■□□□ 1.27
GCN1-207ENST00000550471 GIMAP8Q8ND71 665 aaPredicted RBP22.98■■□□□ 1.27
GCN1-207ENST00000550471 AFAP1L1Q8TED9 768 aa22.98■■□□□ 1.27
GCN1-207ENST00000550471 CDHR1Q96JP9 859 aa22.98■■□□□ 1.27
GCN1-207ENST00000550471 SPATA33Q96N06 139 aa22.98■■□□□ 1.27
GCN1-207ENST00000550471 INPP4AQ96PE3 977 aaPredicted RBP22.98■■□□□ 1.27
GCN1-207ENST00000550471 CDX2Q99626 313 aaPredicted RBP22.98■■□□□ 1.27
GCN1-207ENST00000550471 hCG_1984214I3L0E3 225 aa22.97■■□□□ 1.27
GCN1-207ENST00000550471 FIBPO43427 364 aa22.97■■□□□ 1.27
GCN1-207ENST00000550471 RGS20O76081 388 aa22.97■■□□□ 1.27
GCN1-207ENST00000550471 CYP2C9P11712 490 aa22.97■■□□□ 1.27
GCN1-207ENST00000550471 PCNX4Q63HM2 1172 aa22.97■■□□□ 1.27
GCN1-207ENST00000550471 NLRX1Q86UT6 975 aa22.97■■□□□ 1.27
GCN1-207ENST00000550471 ZNF713Q8N859 430 aaPredicted RBP22.97■■□□□ 1.27
GCN1-207ENST00000550471 FAM161BQ96MY7 647 aa22.97■■□□□ 1.27
GCN1-207ENST00000550471 EHMT1Q9H9B1 1298 aa22.97■■□□□ 1.27
GCN1-207ENST00000550471 SLC4A7Q9Y6M7 1214 aa22.97■■□□□ 1.27
GCN1-207ENST00000550471 GGPS1O95749 300 aa22.96■■□□□ 1.27
GCN1-207ENST00000550471 PSEN2P49810 448 aa22.96■■□□□ 1.27
GCN1-207ENST00000550471 RBL2Q08999 1139 aa22.96■■□□□ 1.27
GCN1-207ENST00000550471 SRBD1Q8N5C6 995 aaKnown RBP22.96■■□□□ 1.27
GCN1-207ENST00000550471 KAT2BQ92831 832 aa22.96■■□□□ 1.27
GCN1-207ENST00000550471 SENP7Q9BQF6 1050 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms