RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 PGBD1Q96JS3 809 aa11□□□□□ -0.65
RAB5B-205ENST00000549034 LLPHQ9BRT6 129 aaKnown RBP11□□□□□ -0.65
RAB5B-205ENST00000549034 WDR11Q9BZH6 1224 aa11□□□□□ -0.65
RAB5B-205ENST00000549034 KATNBL1Q9H079 304 aa11□□□□□ -0.65
RAB5B-205ENST00000549034 CRISPLD2Q9H0B8 497 aa11□□□□□ -0.65
RAB5B-205ENST00000549034 EHMT1Q9H9B1 1298 aa11□□□□□ -0.65
RAB5B-205ENST00000549034 KCNJ14Q9UNX9 436 aa11□□□□□ -0.65
RAB5B-205ENST00000549034 KIAA0100Q14667 2235 aaKnown RBP11□□□□□ -0.65
RAB5B-205ENST00000549034 MYH7BA7E2Y1 1941 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 RBBP6Q7Z6E9 1792 aaKnown RBP10.99□□□□□ -0.65
RAB5B-205ENST00000549034 ESYT2A0FGR8 921 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 ADAMTS3O15072 1205 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 DYNC1LI2O43237 492 aaPredicted RBP10.99□□□□□ -0.65
RAB5B-205ENST00000549034 TXNP10599 105 aaKnown RBP10.99□□□□□ -0.65
RAB5B-205ENST00000549034 SMPD1P17405 629 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 CAPN2P17655 700 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 FOSBP53539 338 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 GJC2Q5T442 439 aaPredicted RBP10.99□□□□□ -0.65
RAB5B-205ENST00000549034 FAM184AQ8NB25 1140 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 ARRDC4Q8NCT1 418 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 SHISA4Q96DD7 197 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 XPNPEP3Q9NQH7 507 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 OGDHLQ9ULD0 1010 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 PCDHA4Q9UN74 947 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 STK36Q9NRP7 1315 aa10.99□□□□□ -0.65
RAB5B-205ENST00000549034 KIAA1217Q5T5P2 1943 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 RBM47A0AV96 593 aaKnown RBP10.98□□□□□ -0.65
RAB5B-205ENST00000549034 DUSP11O75319 330 aaKnown RBP10.98□□□□□ -0.65
RAB5B-205ENST00000549034 PGK1P00558 417 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 ZNF76P36508 570 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 CLK2P49760 499 aaKnown RBP10.98□□□□□ -0.65
RAB5B-205ENST00000549034 MRPS9P82933 396 aaKnown RBP10.98□□□□□ -0.65
RAB5B-205ENST00000549034 TRIM29Q14134 588 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 TTLL4Q14679 1199 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 TMEM63BQ5T3F8 832 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 MCTP2Q6DN12 878 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 IFNLR1Q8IU57 520 aaPredicted RBP10.98□□□□□ -0.65
RAB5B-205ENST00000549034 TEX2Q8IWB9 1127 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 BLIDQ8IZY5 108 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 IL31RAQ8NI17 732 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 RASGRP4Q8TDF6 673 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 SCFD2Q8WU76 684 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 LENG1Q96BZ8 264 aaPredicted RBP10.98□□□□□ -0.65
RAB5B-205ENST00000549034 ANO3Q9BYT9 981 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 AP5M1Q9H0R1 490 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 SPC25Q9HBM1 224 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 GJB4Q9NTQ9 266 aa10.98□□□□□ -0.65
RAB5B-205ENST00000549034 ADCY6O43306 1168 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 STAM2O75886 525 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 C6orf222P0C671 652 aaPredicted RBP10.97□□□□□ -0.65
RAB5B-205ENST00000549034 PTGS1P23219 599 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 HMGN5P82970 282 aaKnown RBP10.97□□□□□ -0.65
RAB5B-205ENST00000549034 AP3B2Q13367 1082 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 LY6KQ17RY6 165 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 DUSP28Q4G0W2 176 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 IFFO2Q5TF58 517 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 PCNX4Q63HM2 1172 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 GALNT17Q6IS24 598 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 XRRA1Q6P2D8 792 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 KCNV1Q6PIU1 500 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 RNF180Q86T96 592 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 NLRX1Q86UT6 975 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 REXO1Q8N1G1 1221 aaKnown RBP10.97□□□□□ -0.65
RAB5B-205ENST00000549034 COPS5Q92905 334 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 PAWRQ96IZ0 340 aaKnown RBP10.97□□□□□ -0.65
RAB5B-205ENST00000549034 PHF20Q9BVI0 1012 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 GNEQ9Y223 722 aaKnown RBP10.97□□□□□ -0.65
RAB5B-205ENST00000549034 MRVI1Q9Y6F6 885 aa10.97□□□□□ -0.65
RAB5B-205ENST00000549034 KBTBD13C9JR72 458 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 NKRFO15226 690 aaKnown RBP eCLIP10.96□□□□□ -0.65
RAB5B-205ENST00000549034 RGS20O76081 388 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 ARIH2O95376 493 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 IRX5P78411 483 aaPredicted RBP10.96□□□□□ -0.65
RAB5B-205ENST00000549034 GUCY1B3Q02153 619 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 LRRC41Q15345 812 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 GNPTABQ3T906 1256 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 GNASQ5JWF2 1037 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 KRT40Q6A162 431 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 POTEHQ6S545 545 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 TLK2Q86UE8 772 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 DHX37Q8IY37 1157 aaKnown RBP10.96□□□□□ -0.65
RAB5B-205ENST00000549034 FAM177A1Q8N128 213 aaPredicted RBP10.96□□□□□ -0.65
RAB5B-205ENST00000549034 ANKLE1Q8NAG6 615 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 OR6J1Q8NGC5 347 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 C8orf76Q96K31 380 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 SENP6Q9GZR1 1112 aaPredicted RBP10.96□□□□□ -0.65
RAB5B-205ENST00000549034 DDX41Q9UJV9 622 aaKnown RBP10.96□□□□□ -0.65
RAB5B-205ENST00000549034 SMC3Q9UQE7 1217 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 Q9Y3F1 56 aa10.96□□□□□ -0.65
RAB5B-205ENST00000549034 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.65
RAB5B-205ENST00000549034 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.96□□□□□ -0.65
RAB5B-205ENST00000549034 FRMPD4Q14CM0 1322 aa10.95□□□□□ -0.66
RAB5B-205ENST00000549034 SYNRGQ9UMZ2 1314 aa10.95□□□□□ -0.66
RAB5B-205ENST00000549034 SPATA31C2B4DYI2 1134 aa10.95□□□□□ -0.66
RAB5B-205ENST00000549034 ZEB2O60315 1214 aa10.95□□□□□ -0.66
RAB5B-205ENST00000549034 SORBS3O60504 671 aa10.95□□□□□ -0.66
RAB5B-205ENST00000549034 FARP2O94887 1054 aaPredicted RBP10.95□□□□□ -0.66
RAB5B-205ENST00000549034 TGFB3P10600 412 aa10.95□□□□□ -0.66
RAB5B-205ENST00000549034 KRT2P35908 639 aa10.95□□□□□ -0.66
RAB5B-205ENST00000549034 GJA9P57773 515 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms