RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 ARHGAP1Q07960 439 aa23.02■■□□□ 1.28
CHD4-213ENST00000545584 SLC35G1Q2M3R5 365 aa23.02■■□□□ 1.28
CHD4-213ENST00000545584 KCNV1Q6PIU1 500 aa23.02■■□□□ 1.28
CHD4-213ENST00000545584 LY9Q9HBG7 655 aa23.02■■□□□ 1.28
CHD4-213ENST00000545584 DDX41Q9UJV9 622 aaKnown RBP23.02■■□□□ 1.28
CHD4-213ENST00000545584 KIAA1217Q5T5P2 1943 aa23.02■■□□□ 1.28
CHD4-213ENST00000545584 SCN10AQ9Y5Y9 1956 aa23.01■■□□□ 1.27
CHD4-213ENST00000545584 CCDC69A6NI79 296 aa23.01■■□□□ 1.27
CHD4-213ENST00000545584 CYP2C9P11712 490 aa23.01■■□□□ 1.27
CHD4-213ENST00000545584 GNAQP50148 359 aa23.01■■□□□ 1.27
CHD4-213ENST00000545584 CREB3L3Q68CJ9 461 aa23.01■■□□□ 1.27
CHD4-213ENST00000545584 PIBF1Q8WXW3 757 aa23.01■■□□□ 1.27
CHD4-213ENST00000545584 HERVK_113Q902F9 699 aa23.01■■□□□ 1.27
CHD4-213ENST00000545584 CDX2Q99626 313 aaPredicted RBP23.01■■□□□ 1.27
CHD4-213ENST00000545584 LZTS2Q9BRK4 669 aa23.01■■□□□ 1.27
CHD4-213ENST00000545584 NOD1Q9Y239 953 aa23.01■■□□□ 1.27
CHD4-213ENST00000545584 DNAJB2P25686 324 aa23■■□□□ 1.27
CHD4-213ENST00000545584 LAMC2Q13753 1193 aa23■■□□□ 1.27
CHD4-213ENST00000545584 NECTIN1Q15223 517 aa23■■□□□ 1.27
CHD4-213ENST00000545584 DGKDQ16760 1214 aa23■■□□□ 1.27
CHD4-213ENST00000545584 RASIP1Q5U651 963 aa23■■□□□ 1.27
CHD4-213ENST00000545584 RNF20Q5VTR2 975 aa23■■□□□ 1.27
CHD4-213ENST00000545584 FCHSD1Q86WN1 690 aa23■■□□□ 1.27
CHD4-213ENST00000545584 RRP36Q96EU6 259 aaKnown RBP23■■□□□ 1.27
CHD4-213ENST00000545584 MYL10Q9BUA6 226 aa23■■□□□ 1.27
CHD4-213ENST00000545584 SPZ1Q9BXG8 430 aa23■■□□□ 1.27
CHD4-213ENST00000545584 WNT8AQ9H1J5 351 aa23■■□□□ 1.27
CHD4-213ENST00000545584 TTYH1Q9H313 450 aaPredicted RBP23■■□□□ 1.27
CHD4-213ENST00000545584 SMARCA1P28370 1054 aa22.99■■□□□ 1.27
CHD4-213ENST00000545584 CCND2P30279 289 aa22.99■■□□□ 1.27
CHD4-213ENST00000545584 PGM5Q15124 567 aa22.99■■□□□ 1.27
CHD4-213ENST00000545584 VSIG10LQ86VR7 867 aa22.99■■□□□ 1.27
CHD4-213ENST00000545584 DHX37Q8IY37 1157 aaKnown RBP22.99■■□□□ 1.27
CHD4-213ENST00000545584 EMID1Q96A84 441 aaPredicted RBP22.99■■□□□ 1.27
CHD4-213ENST00000545584 SEC63Q9UGP8 760 aaKnown RBP22.99■■□□□ 1.27
CHD4-213ENST00000545584 SH2B2O14492 632 aaPredicted RBP22.98■■□□□ 1.27
CHD4-213ENST00000545584 PFKMP08237 780 aa22.98■■□□□ 1.27
CHD4-213ENST00000545584 CALM1P0DP23 149 aa22.98■■□□□ 1.27
CHD4-213ENST00000545584 CALM2P0DP24 149 aa22.98■■□□□ 1.27
CHD4-213ENST00000545584 CALM3P0DP25 149 aa22.98■■□□□ 1.27
CHD4-213ENST00000545584 OTOP2Q7RTS6 562 aa22.98■■□□□ 1.27
CHD4-213ENST00000545584 RETREG2Q8NC44 543 aa22.98■■□□□ 1.27
CHD4-213ENST00000545584 TIFAQ96CG3 184 aa22.98■■□□□ 1.27
CHD4-213ENST00000545584 SCLYQ96I15 445 aa22.98■■□□□ 1.27
CHD4-213ENST00000545584 LIFRP42702 1097 aa22.97■■□□□ 1.27
CHD4-213ENST00000545584 BFSP2Q13515 415 aa22.97■■□□□ 1.27
CHD4-213ENST00000545584 PPP1R13LQ8WUF5 828 aa22.97■■□□□ 1.27
CHD4-213ENST00000545584 CUL5Q93034 780 aa22.97■■□□□ 1.27
CHD4-213ENST00000545584 KATNAL1Q9BW62 490 aa22.97■■□□□ 1.27
CHD4-213ENST00000545584 SLC12A7Q9Y666 1083 aa22.97■■□□□ 1.27
CHD4-213ENST00000545584 LAMA2P24043 3122 aaKnown RBP22.97■■□□□ 1.27
CHD4-213ENST00000545584 TGFB3P10600 412 aa22.96■■□□□ 1.27
CHD4-213ENST00000545584 RAB30Q15771 203 aa22.96■■□□□ 1.27
CHD4-213ENST00000545584 PTGISQ16647 500 aa22.96■■□□□ 1.27
CHD4-213ENST00000545584 SKAP1Q86WV1 359 aa22.96■■□□□ 1.27
CHD4-213ENST00000545584 PPTC7Q8NI37 304 aa22.96■■□□□ 1.27
CHD4-213ENST00000545584 MYLIPQ8WY64 445 aa22.96■■□□□ 1.27
CHD4-213ENST00000545584 GRXCR1A8MXD5 290 aa22.95■■□□□ 1.26
CHD4-213ENST00000545584 PITPNM1O00562 1244 aa22.95■■□□□ 1.26
CHD4-213ENST00000545584 RFC2P35250 354 aa22.95■■□□□ 1.26
CHD4-213ENST00000545584 GNPTABQ3T906 1256 aa22.95■■□□□ 1.26
CHD4-213ENST00000545584 SYNE3Q6ZMZ3 975 aa22.95■■□□□ 1.26
CHD4-213ENST00000545584 SESTD1Q86VW0 696 aa22.95■■□□□ 1.26
CHD4-213ENST00000545584 CCDC155Q8N6L0 562 aa22.95■■□□□ 1.26
CHD4-213ENST00000545584 IL31RAQ8NI17 732 aa22.95■■□□□ 1.26
CHD4-213ENST00000545584 SMARCC2Q8TAQ2 1214 aa22.95■■□□□ 1.26
CHD4-213ENST00000545584 PBX4Q9BYU1 374 aa22.95■■□□□ 1.26
CHD4-213ENST00000545584 ZNF576Q9H609 170 aa22.95■■□□□ 1.26
CHD4-213ENST00000545584 CXXC1Q9P0U4 656 aaPredicted RBP22.95■■□□□ 1.26
CHD4-213ENST00000545584 MSRAQ9UJ68 235 aa22.95■■□□□ 1.26
CHD4-213ENST00000545584 COL6A3P12111 3177 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 ZBBXA8MT70 800 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 STAM2O75886 525 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 RGS20O76081 388 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 GGPS1O95749 300 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 FOSL2P15408 326 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 CELF3Q5SZQ8 465 aaKnown RBP22.94■■□□□ 1.26
CHD4-213ENST00000545584 MYSM1Q5VVJ2 828 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 DEFB128Q7Z7B8 93 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 C7orf31Q8N865 590 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 KAT2BQ92831 832 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 SPATA33Q96N06 139 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 MLXIPQ9HAP2 919 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 SLC4A7Q9Y6M7 1214 aa22.94■■□□□ 1.26
CHD4-213ENST00000545584 PPFIA4O75335 1185 aa22.93■■□□□ 1.26
CHD4-213ENST00000545584 CDC45O75419 566 aa22.93■■□□□ 1.26
CHD4-213ENST00000545584 PLEKHA8P1O95397 391 aa22.93■■□□□ 1.26
CHD4-213ENST00000545584 ACTN1P12814 892 aa22.93■■□□□ 1.26
CHD4-213ENST00000545584 RXRAP19793 462 aa22.93■■□□□ 1.26
CHD4-213ENST00000545584 PBX2P40425 430 aa22.93■■□□□ 1.26
CHD4-213ENST00000545584 PSEN2P49810 448 aa22.93■■□□□ 1.26
CHD4-213ENST00000545584 SRBD1Q8N5C6 995 aaKnown RBP22.93■■□□□ 1.26
CHD4-213ENST00000545584 CAGE1Q8TC20 777 aa22.93■■□□□ 1.26
CHD4-213ENST00000545584 ZFP91Q96JP5 570 aaPredicted RBP22.93■■□□□ 1.26
CHD4-213ENST00000545584 ALG1Q9BT22 464 aa22.93■■□□□ 1.26
CHD4-213ENST00000545584 LRRC2Q9BYS8 371 aa22.93■■□□□ 1.26
CHD4-213ENST00000545584 MYH7BA7E2Y1 1941 aa22.92■■□□□ 1.26
CHD4-213ENST00000545584 F2P00734 622 aa22.92■■□□□ 1.26
CHD4-213ENST00000545584 IQCF3P0C7M6 154 aa22.92■■□□□ 1.26
CHD4-213ENST00000545584 UBA1P22314 1058 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms