RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 EMID1Q96A84 441 aaPredicted RBP20.17■□□□□ 0.82
TRPT1-212ENST00000542040 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.17■□□□□ 0.825e-11■■■□□ 16.3
TRPT1-212ENST00000542040 PDCD2LQ9BRP1 358 aa20.17■□□□□ 0.82
TRPT1-212ENST00000542040 LY9Q9HBG7 655 aa20.17■□□□□ 0.82
TRPT1-212ENST00000542040 COL20A1Q9P218 1284 aa20.17■□□□□ 0.82
TRPT1-212ENST00000542040 DDX41Q9UJV9 622 aaKnown RBP20.17■□□□□ 0.82
TRPT1-212ENST00000542040 GRIN2DO15399 1336 aa20.17■□□□□ 0.82
TRPT1-212ENST00000542040 ACTN1P12814 892 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 EPHB4P54760 987 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 CHMP4BP1P59074 171 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 NECTIN1Q15223 517 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 ZNF365Q70YC5 407 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 VSIG10LQ86VR7 867 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 FCHSD1Q86WN1 690 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 SMARCC2Q8TAQ2 1214 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 AFG1LQ8WV93 481 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 COPS5Q92905 334 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 CCDC136Q96JN2 1154 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 NOC4LQ9BVI4 516 aaKnown RBP20.16■□□□□ 0.82
TRPT1-212ENST00000542040 SEMA6BQ9H3T3 888 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 MSRAQ9UJ68 235 aa20.16■□□□□ 0.82
TRPT1-212ENST00000542040 CDC45O75419 566 aa20.15■□□□□ 0.82
TRPT1-212ENST00000542040 MMP3P08254 477 aa20.15■□□□□ 0.82
TRPT1-212ENST00000542040 HMGB1P09429 215 aaKnown RBP20.15■□□□□ 0.82
TRPT1-212ENST00000542040 HOXA13P31271 388 aaPredicted RBP20.15■□□□□ 0.82
TRPT1-212ENST00000542040 CCL23P55773 120 aa20.15■□□□□ 0.82
TRPT1-212ENST00000542040 ANTXR2P58335 489 aa20.15■□□□□ 0.82
TRPT1-212ENST00000542040 PGM5Q15124 567 aa20.15■□□□□ 0.82
TRPT1-212ENST00000542040 RAB30Q15771 203 aa20.15■□□□□ 0.82
TRPT1-212ENST00000542040 XRRA1Q6P2D8 792 aa20.15■□□□□ 0.82
TRPT1-212ENST00000542040 PPTC7Q8NI37 304 aa20.15■□□□□ 0.82
TRPT1-212ENST00000542040 HERVK_113Q902F9 699 aa20.15■□□□□ 0.82
TRPT1-212ENST00000542040 FAM161BQ96MY7 647 aa20.15■□□□□ 0.82
TRPT1-212ENST00000542040 MLXIPQ9HAP2 919 aa20.15■□□□□ 0.82
TRPT1-212ENST00000542040 LRRC37A2A6NM11 1700 aa20.14■□□□□ 0.81
TRPT1-212ENST00000542040 PITPNM1O00562 1244 aa20.14■□□□□ 0.81
TRPT1-212ENST00000542040 SH2B2O14492 632 aaPredicted RBP20.14■□□□□ 0.81
TRPT1-212ENST00000542040 PPFIA4O75335 1185 aa20.14■□□□□ 0.81
TRPT1-212ENST00000542040 ARIH2O95376 493 aa20.14■□□□□ 0.81
TRPT1-212ENST00000542040 PARNO95453 639 aaKnown RBP20.14■□□□□ 0.81
TRPT1-212ENST00000542040 PTGS1P23219 599 aa20.14■□□□□ 0.81
TRPT1-212ENST00000542040 C7orf31Q8N865 590 aa20.14■□□□□ 0.81
TRPT1-212ENST00000542040 NEK1Q96PY6 1258 aa20.14■□□□□ 0.81
TRPT1-212ENST00000542040 TRMT13Q9NUP7 481 aaKnown RBP20.14■□□□□ 0.81
TRPT1-212ENST00000542040 CYTH3O43739 400 aa20.13■□□□□ 0.81
TRPT1-212ENST00000542040 PPP1R11O60927 126 aaPredicted RBP20.13■□□□□ 0.81
TRPT1-212ENST00000542040 ACRP10323 421 aa20.13■□□□□ 0.81
TRPT1-212ENST00000542040 ARHGAP1Q07960 439 aa20.13■□□□□ 0.81
TRPT1-212ENST00000542040 PTGISQ16647 500 aa20.13■□□□□ 0.81
TRPT1-212ENST00000542040 SESTD1Q86VW0 696 aa20.13■□□□□ 0.81
TRPT1-212ENST00000542040 CAGE1Q8TC20 777 aa20.13■□□□□ 0.81
TRPT1-212ENST00000542040 PIBF1Q8WXW3 757 aa20.13■□□□□ 0.81
TRPT1-212ENST00000542040 EHMT1Q9H9B1 1298 aa20.13■□□□□ 0.81
TRPT1-212ENST00000542040 SENP2Q9HC62 589 aa20.13■□□□□ 0.81
TRPT1-212ENST00000542040 RBM28Q9NW13 759 aaKnown RBP20.13■□□□□ 0.81
TRPT1-212ENST00000542040 DNAJB2P25686 324 aa20.12■□□□□ 0.81
TRPT1-212ENST00000542040 FGD1P98174 961 aa20.12■□□□□ 0.81
TRPT1-212ENST00000542040 NEDD9Q14511 834 aa20.12■□□□□ 0.81
TRPT1-212ENST00000542040 NLRX1Q86UT6 975 aa20.12■□□□□ 0.81
TRPT1-212ENST00000542040 TEX2Q8IWB9 1127 aa20.12■□□□□ 0.81
TRPT1-212ENST00000542040 FANCBQ8NB91 859 aa20.12■□□□□ 0.81
TRPT1-212ENST00000542040 GIMAP8Q8ND71 665 aaPredicted RBP20.12■□□□□ 0.81
TRPT1-212ENST00000542040 TIFAQ96CG3 184 aa20.12■□□□□ 0.81
TRPT1-212ENST00000542040 SPATA33Q96N06 139 aa20.12■□□□□ 0.81
TRPT1-212ENST00000542040 TAF6LQ9Y6J9 622 aa20.12■□□□□ 0.81
TRPT1-212ENST00000542040 SLC4A7Q9Y6M7 1214 aa20.12■□□□□ 0.81
TRPT1-212ENST00000542040 NOP56O00567 594 aaKnown RBP20.11■□□□□ 0.81
TRPT1-212ENST00000542040 OPLAHO14841 1288 aa20.11■□□□□ 0.81
TRPT1-212ENST00000542040 CYP2C9P11712 490 aa20.11■□□□□ 0.81
TRPT1-212ENST00000542040 CELF3Q5SZQ8 465 aaKnown RBP20.11■□□□□ 0.81
TRPT1-212ENST00000542040 C16orf59Q7L2K0 433 aa20.11■□□□□ 0.81
TRPT1-212ENST00000542040 SGMS1Q86VZ5 419 aa20.11■□□□□ 0.81
TRPT1-212ENST00000542040 CDHR1Q96JP9 859 aa20.11■□□□□ 0.81
TRPT1-212ENST00000542040 CDX2Q99626 313 aaPredicted RBP20.11■□□□□ 0.81
TRPT1-212ENST00000542040 LCTP09848 1927 aa20.1■□□□□ 0.81
TRPT1-212ENST00000542040 ZBBXA8MT70 800 aa20.1■□□□□ 0.81
TRPT1-212ENST00000542040 PIK3CDO00329 1044 aa20.1■□□□□ 0.81
TRPT1-212ENST00000542040 RASIP1Q5U651 963 aa20.1■□□□□ 0.81
TRPT1-212ENST00000542040 DHX32Q7L7V1 743 aaKnown RBP20.1■□□□□ 0.81
TRPT1-212ENST00000542040 OTOP2Q7RTS6 562 aa20.1■□□□□ 0.81
TRPT1-212ENST00000542040 AFAP1L1Q8TED9 768 aa20.1■□□□□ 0.81
TRPT1-212ENST00000542040 GUCD1Q96NT3 240 aa20.1■□□□□ 0.81
TRPT1-212ENST00000542040 MYL10Q9BUA6 226 aa20.1■□□□□ 0.81
TRPT1-212ENST00000542040 FTOQ9C0B1 505 aaKnown RBP eCLIP20.1■□□□□ 0.81
TRPT1-212ENST00000542040 PSTPIP2Q9H939 334 aa20.1■□□□□ 0.81
TRPT1-212ENST00000542040 SZT2Q5T011 3432 aa20.09■□□□□ 0.81
TRPT1-212ENST00000542040 FIBPO43427 364 aa20.09■□□□□ 0.81
TRPT1-212ENST00000542040 GGPS1O95749 300 aa20.09■□□□□ 0.81
TRPT1-212ENST00000542040 PSEN2P49810 448 aa20.09■□□□□ 0.81
TRPT1-212ENST00000542040 MFSD10Q14728 455 aa20.09■□□□□ 0.81
TRPT1-212ENST00000542040 TSGA10IPQ3SY00 556 aa20.09■□□□□ 0.81
TRPT1-212ENST00000542040 MYSM1Q5VVJ2 828 aa20.09■□□□□ 0.81
TRPT1-212ENST00000542040 ZNF576Q9H609 170 aa20.09■□□□□ 0.81
TRPT1-212ENST00000542040 LAMA3Q16787 3333 aa20.08■□□□□ 0.81
TRPT1-212ENST00000542040 CCDC196A0A1B0GTZ2 297 aa20.08■□□□□ 0.81
TRPT1-212ENST00000542040 SPDYE3A6NKU9 549 aa20.08■□□□□ 0.81
TRPT1-212ENST00000542040 FOSL2P15408 326 aa20.08■□□□□ 0.81
TRPT1-212ENST00000542040 KIAA0753Q2KHM9 967 aa20.08■□□□□ 0.81
TRPT1-212ENST00000542040 SRBD1Q8N5C6 995 aaKnown RBP20.08■□□□□ 0.81
TRPT1-212ENST00000542040 SCLYQ96I15 445 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms