RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 IGDCC4Q8TDY8 1250 aa13.2□□□□□ -0.3
VTN-203ENST00000542029 TMEM87BQ96K49 555 aa13.2□□□□□ -0.3
VTN-203ENST00000542029 PIGSQ96S52 555 aa13.2□□□□□ -0.3
VTN-203ENST00000542029 WNT8AQ9H1J5 351 aa13.2□□□□□ -0.3
VTN-203ENST00000542029 MCM3APO60318 1980 aa13.2□□□□□ -0.3
VTN-203ENST00000542029 UMODL1Q5DID0 1318 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 COL6A3P12111 3177 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 OPLAHO14841 1288 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 PPP1R11O60927 126 aaPredicted RBP13.19□□□□□ -0.3
VTN-203ENST00000542029 STAM2O75886 525 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 PARNO95453 639 aaKnown RBP13.19□□□□□ -0.3
VTN-203ENST00000542029 CYP2C9P11712 490 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 ACTN1P12814 892 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 MCM5P33992 734 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 VSIG10LQ86VR7 867 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 DHX37Q8IY37 1157 aaKnown RBP13.19□□□□□ -0.3
VTN-203ENST00000542029 MAFAQ8NHW3 353 aaPredicted RBP13.19□□□□□ -0.3
VTN-203ENST00000542029 PPTC7Q8NI37 304 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 CAGE1Q8TC20 777 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 MYLIPQ8WY64 445 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 PBX4Q9BYU1 374 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 SLC4A7Q9Y6M7 1214 aa13.19□□□□□ -0.3
VTN-203ENST00000542029 CYTH3O43739 400 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 PPFIA4O75335 1185 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 CALM1P0DP23 149 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 CALM2P0DP24 149 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 CALM3P0DP25 149 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 MYCLP12524 364 aaPredicted RBP13.18□□□□□ -0.3
VTN-203ENST00000542029 CCND2P30279 289 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 ANTXR2P58335 489 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 GNPTABQ3T906 1256 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 BMP2KLQ5H9B9 411 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 RNF20Q5VTR2 975 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 CHST3Q7LGC8 479 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 OTOP2Q7RTS6 562 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.18□□□□□ -0.3
VTN-203ENST00000542029 CUL5Q93034 780 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 RRP36Q96EU6 259 aaKnown RBP13.18□□□□□ -0.3
VTN-203ENST00000542029 SPZ1Q9BXG8 430 aa13.18□□□□□ -0.3
VTN-203ENST00000542029 SEC63Q9UGP8 760 aaKnown RBP13.18□□□□□ -0.3
VTN-203ENST00000542029 CCDC69A6NI79 296 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 PRC1O43663 620 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 HOXD8P13378 290 aaPredicted RBP13.17□□□□□ -0.3
VTN-203ENST00000542029 HOXA13P31271 388 aaPredicted RBP13.17□□□□□ -0.3
VTN-203ENST00000542029 LIFRP42702 1097 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 GRIN2CQ14957 1233 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 PGM5Q15124 567 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 PTGISQ16647 500 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 CENPQQ7L2Z9 268 aaPredicted RBP13.17□□□□□ -0.3
VTN-203ENST00000542029 ZNF654Q8IZM8 581 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 AFAP1L1Q8TED9 768 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 SCLYQ96I15 445 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 GAS2L1Q99501 681 aaPredicted RBP13.17□□□□□ -0.3
VTN-203ENST00000542029 ESYT1Q9BSJ8 1104 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 LSG1Q9H089 658 aaKnown RBP13.17□□□□□ -0.3
VTN-203ENST00000542029 SLC28A3Q9HAS3 691 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 LY9Q9HBG7 655 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 SENP2Q9HC62 589 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 CXXC1Q9P0U4 656 aaPredicted RBP13.17□□□□□ -0.3
VTN-203ENST00000542029 TAF6LQ9Y6J9 622 aa13.17□□□□□ -0.3
VTN-203ENST00000542029 LAMA2P24043 3122 aaKnown RBP13.16□□□□□ -0.3
VTN-203ENST00000542029 ZBBXA8MT70 800 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 GRXCR1A8MXD5 290 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 SLC27A2O14975 620 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 F2P00734 622 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 IQCF3P0C7M6 154 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 SLC35G1Q2M3R5 365 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 CELF3Q5SZQ8 465 aaKnown RBP13.16□□□□□ -0.3
VTN-203ENST00000542029 MYSM1Q5VVJ2 828 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 XRRA1Q6P2D8 792 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 FCHSD1Q86WN1 690 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 C7orf31Q8N865 590 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 PHOSPHO2Q8TCD6 241 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 KAT2BQ92831 832 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 SPATA33Q96N06 139 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 MLXIPQ9HAP2 919 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 A0A0C4DFX4 3053 aa13.16□□□□□ -0.3
VTN-203ENST00000542029 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
VTN-203ENST00000542029 RGS20O76081 388 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 GGPS1O95749 300 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 ATP2A2P16615 1042 aaKnown RBP13.15□□□□□ -0.3
VTN-203ENST00000542029 PBX2P40425 430 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 PSEN2P49810 448 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 RBL2Q08999 1139 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 NEDD9Q14511 834 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 MFSD10Q14728 455 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 NECTIN1Q15223 517 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 CREB3L3Q68CJ9 461 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 SYNE3Q6ZMZ3 975 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 DEFB128Q7Z7B8 93 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 SMARCC2Q8TAQ2 1214 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 SLC9A7Q96T83 725 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 FTOQ9C0B1 505 aaKnown RBP eCLIP13.15□□□□□ -0.3
VTN-203ENST00000542029 ANO2Q9NQ90 1003 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 GTF2IRD1Q9UHL9 959 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 PCDHA11Q9Y5I1 949 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms