RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 RETREG2Q8NC44 543 aa19.4■□□□□ 0.7
PSMD3-204ENST00000540504 PDCD2LQ9BRP1 358 aa19.4■□□□□ 0.7
PSMD3-204ENST00000540504 NOD1Q9Y239 953 aa19.4■□□□□ 0.7
PSMD3-204ENST00000540504 MRVI1Q9Y6F6 885 aa19.4■□□□□ 0.7
PSMD3-204ENST00000540504 SLC4A7Q9Y6M7 1214 aa19.4■□□□□ 0.7
PSMD3-204ENST00000540504 CDH23Q9H251 3354 aa19.4■□□□□ 0.7
PSMD3-204ENST00000540504 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.69
PSMD3-204ENST00000540504 LAMC2Q13753 1193 aa19.39■□□□□ 0.69
PSMD3-204ENST00000540504 CATIPQ7Z7H3 387 aa19.39■□□□□ 0.69
PSMD3-204ENST00000540504 HOMER1Q86YM7 354 aa19.39■□□□□ 0.69
PSMD3-204ENST00000540504 CCDC155Q8N6L0 562 aa19.39■□□□□ 0.69
PSMD3-204ENST00000540504 VWCEQ96DN2 955 aa19.39■□□□□ 0.69
PSMD3-204ENST00000540504 PIGSQ96S52 555 aa19.39■□□□□ 0.69
PSMD3-204ENST00000540504 GAS2L1Q99501 681 aaPredicted RBP19.39■□□□□ 0.69
PSMD3-204ENST00000540504 MAP3K14Q99558 947 aa19.39■□□□□ 0.69
PSMD3-204ENST00000540504 MTA3Q9BTC8 594 aa19.39■□□□□ 0.69
PSMD3-204ENST00000540504 GBF1Q92538 1859 aa19.39■□□□□ 0.69
PSMD3-204ENST00000540504 PNMA6FA0A0J9YX94 578 aa19.38■□□□□ 0.69
PSMD3-204ENST00000540504 GCOM1H8Y6P7 765 aaPredicted RBP19.38■□□□□ 0.69
PSMD3-204ENST00000540504 IQCF3P0C7M6 154 aa19.38■□□□□ 0.69
PSMD3-204ENST00000540504 POLR2MP0CAP2 368 aa19.38■□□□□ 0.69
PSMD3-204ENST00000540504 ACTN1P12814 892 aa19.38■□□□□ 0.69
PSMD3-204ENST00000540504 TMEM67Q5HYA8 995 aa19.38■□□□□ 0.69
PSMD3-204ENST00000540504 CHST3Q7LGC8 479 aa19.38■□□□□ 0.69
PSMD3-204ENST00000540504 VSIG10LQ86VR7 867 aa19.38■□□□□ 0.69
PSMD3-204ENST00000540504 CAGE1Q8TC20 777 aa19.38■□□□□ 0.69
PSMD3-204ENST00000540504 KATNAL1Q9BW62 490 aa19.38■□□□□ 0.69
PSMD3-204ENST00000540504 TANC1Q9C0D5 1861 aa19.38■□□□□ 0.69
PSMD3-204ENST00000540504 SLC28A3Q9HAS3 691 aa19.38■□□□□ 0.69
PSMD3-204ENST00000540504 ZBBXA8MT70 800 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 CYTH3O43739 400 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 TGFB3P10600 412 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 PGM5Q15124 567 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 PTGISQ16647 500 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 SLC35G1Q2M3R5 365 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 DHX37Q8IY37 1157 aaKnown RBP19.37■□□□□ 0.69
PSMD3-204ENST00000540504 MB21D2Q8IYB1 491 aaPredicted RBP19.37■□□□□ 0.69
PSMD3-204ENST00000540504 PPTC7Q8NI37 304 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 IGDCC4Q8TDY8 1250 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 KAT2BQ92831 832 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 SENP2Q9HC62 589 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 PCDHA11Q9Y5I1 949 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 RBM8AQ9Y5S9 174 aaKnown RBP19.37■□□□□ 0.69
PSMD3-204ENST00000540504 TAF6LQ9Y6J9 622 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 SCN5AQ14524 2016 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 MYH7BA7E2Y1 1941 aa19.37■□□□□ 0.69
PSMD3-204ENST00000540504 MYCLP12524 364 aaPredicted RBP19.36■□□□□ 0.69
PSMD3-204ENST00000540504 ATP2A2P16615 1042 aaKnown RBP19.36■□□□□ 0.69
PSMD3-204ENST00000540504 HOXA13P31271 388 aaPredicted RBP19.36■□□□□ 0.69
PSMD3-204ENST00000540504 ANTXR2P58335 489 aa19.36■□□□□ 0.69
PSMD3-204ENST00000540504 CHMP4BP1P59074 171 aa19.36■□□□□ 0.69
PSMD3-204ENST00000540504 DEFB128Q7Z7B8 93 aa19.36■□□□□ 0.69
PSMD3-204ENST00000540504 TMTC2Q8N394 836 aa19.36■□□□□ 0.69
PSMD3-204ENST00000540504 AFAP1L1Q8TED9 768 aa19.36■□□□□ 0.69
PSMD3-204ENST00000540504 COL25A1Q9BXS0 654 aaPredicted RBP19.36■□□□□ 0.69
PSMD3-204ENST00000540504 NKX2-4Q9H2Z4 354 aa19.36■□□□□ 0.69
PSMD3-204ENST00000540504 PRUNE2Q8WUY3 3088 aa19.35■□□□□ 0.69
PSMD3-204ENST00000540504 BAZ2BQ9UIF8 2168 aaKnown RBP19.35■□□□□ 0.69
PSMD3-204ENST00000540504 PPFIA4O75335 1185 aa19.35■□□□□ 0.69
PSMD3-204ENST00000540504 RGS20O76081 388 aa19.35■□□□□ 0.69
PSMD3-204ENST00000540504 DDAH1O94760 285 aa19.35■□□□□ 0.69
PSMD3-204ENST00000540504 PARNO95453 639 aaKnown RBP19.35■□□□□ 0.69
PSMD3-204ENST00000540504 F2P00734 622 aa19.35■□□□□ 0.69
PSMD3-204ENST00000540504 SMARCA1P28370 1054 aa19.35■□□□□ 0.69
PSMD3-204ENST00000540504 CCND2P30279 289 aa19.35■□□□□ 0.69
PSMD3-204ENST00000540504 KIF5BP33176 963 aa19.35■□□□□ 0.69
PSMD3-204ENST00000540504 GDF6Q6KF10 455 aaPredicted RBP19.35■□□□□ 0.69
PSMD3-204ENST00000540504 CTCFLQ8NI51 663 aaPredicted RBP19.35■□□□□ 0.69
PSMD3-204ENST00000540504 PPP1R13LQ8WUF5 828 aa19.35■□□□□ 0.69
PSMD3-204ENST00000540504 PRDM12Q9H4Q4 367 aa19.35■□□□□ 0.69
PSMD3-204ENST00000540504 GTF2IRD1Q9UHL9 959 aa19.35■□□□□ 0.69
PSMD3-204ENST00000540504 YBX2Q9Y2T7 364 aaKnown RBP19.35■□□□□ 0.69
PSMD3-204ENST00000540504 HAS3O00219 553 aa19.34■□□□□ 0.69
PSMD3-204ENST00000540504 STAM2O75886 525 aa19.34■□□□□ 0.69
PSMD3-204ENST00000540504 HOXD8P13378 290 aaPredicted RBP19.34■□□□□ 0.69
PSMD3-204ENST00000540504 PSEN2P49810 448 aa19.34■□□□□ 0.69
PSMD3-204ENST00000540504 RBL2Q08999 1139 aa19.34■□□□□ 0.69
PSMD3-204ENST00000540504 CELF3Q5SZQ8 465 aaKnown RBP19.34■□□□□ 0.69
PSMD3-204ENST00000540504 MYSM1Q5VVJ2 828 aa19.34■□□□□ 0.69
PSMD3-204ENST00000540504 CASC1Q6TDU7 716 aa19.34■□□□□ 0.69
PSMD3-204ENST00000540504 C7orf31Q8N865 590 aa19.34■□□□□ 0.69
PSMD3-204ENST00000540504 PHOSPHO2Q8TCD6 241 aa19.34■□□□□ 0.69
PSMD3-204ENST00000540504 SLC9A7Q96T83 725 aa19.34■□□□□ 0.69
PSMD3-204ENST00000540504 SPZ1Q9BXG8 430 aa19.34■□□□□ 0.69
PSMD3-204ENST00000540504 FTOQ9C0B1 505 aaKnown RBP eCLIP19.34■□□□□ 0.69
PSMD3-204ENST00000540504 TRIP12Q14669 1992 aaPredicted RBP19.33■□□□□ 0.69
PSMD3-204ENST00000540504 BAIAP3O94812 1187 aa19.33■□□□□ 0.68
PSMD3-204ENST00000540504 MFSD10Q14728 455 aa19.33■□□□□ 0.68
PSMD3-204ENST00000540504 GNPTABQ3T906 1256 aa19.33■□□□□ 0.68
PSMD3-204ENST00000540504 FCHSD1Q86WN1 690 aa19.33■□□□□ 0.68
PSMD3-204ENST00000540504 ZNF654Q8IZM8 581 aa19.33■□□□□ 0.68
PSMD3-204ENST00000540504 IL31RAQ8NI17 732 aa19.33■□□□□ 0.68
PSMD3-204ENST00000540504 TMEM87BQ96K49 555 aa19.33■□□□□ 0.68
PSMD3-204ENST00000540504 CTAGE1Q96RT6 745 aa19.33■□□□□ 0.68
PSMD3-204ENST00000540504 LZTS2Q9BRK4 669 aa19.33■□□□□ 0.68
PSMD3-204ENST00000540504 LY9Q9HBG7 655 aa19.33■□□□□ 0.68
PSMD3-204ENST00000540504 HDAC6Q9UBN7 1215 aa19.33■□□□□ 0.68
PSMD3-204ENST00000540504 FRMPD4Q14CM0 1322 aa19.32■□□□□ 0.68
PSMD3-204ENST00000540504 GGPS1O95749 300 aa19.32■□□□□ 0.68
PSMD3-204ENST00000540504 SELPP16109 830 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms