RNA–Protein interactions for RNA: ENST00000540103.1

NPIPB4-212, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-212ENST00000540103 PTPN11Q06124 597 aaPredicted RBP9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 TTLL4Q14679 1199 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 NECTIN1Q15223 517 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 STXBP2Q15833 593 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 NFRKBQ6P4R8 1299 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 SEPT14Q6ZU15 432 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 CHST3Q7LGC8 479 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 VSIG10LQ86VR7 867 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 SESTD1Q86VW0 696 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 AFG1LQ8WV93 481 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 EMID1Q96A84 441 aaPredicted RBP9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 SCLYQ96I15 445 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 PIGSQ96S52 555 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 PDCD2LQ9BRP1 358 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 ZNF576Q9H609 170 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 GPHNQ9NQX3 736 aaPredicted RBP9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 PXMP2Q9NR77 195 aa9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 MAP3K20Q9NYL2 800 aaKnown RBP9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 RBM8AQ9Y5S9 174 aaKnown RBP9.29□□□□□ -0.92
NPIPB4-212ENST00000540103 GBF1Q92538 1859 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 HAS3O00219 553 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 IFIT3O14879 490 aaKnown RBP9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 CFBP00751 764 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 MMP3P08254 477 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 SUPT20HL2P0C7V6 817 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 EIF2AK2P19525 551 aaKnown RBP9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 SP2Q02086 613 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 C8orf34Q49A92 452 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 PSRC1Q6PGN9 363 aaPredicted RBP9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 NCOA7Q8NI08 942 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 IL31RAQ8NI17 732 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 MAP3K14Q99558 947 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 MTA3Q9BTC8 594 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 YBX2Q9Y2T7 364 aaKnown RBP9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 PCDHA1Q9Y5I3 950 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 PRUNE2Q8WUY3 3088 aa9.28□□□□□ -0.92
NPIPB4-212ENST00000540103 CDH23Q9H251 3354 aa9.27□□□□□ -0.92
NPIPB4-212ENST00000540103 PNMA6FA0A0J9YX94 578 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 RBAK-RBAKDNI3L0D1 243 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 GH1P01241 217 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 IQCF3P0C7M6 154 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 SMARCA1P28370 1054 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 MRPS9P82933 396 aaKnown RBP9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 TRDNQ13061 729 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 HIC1Q14526 733 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 WTAPQ15007 396 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 PGM5Q15124 567 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 ARHGEF16Q5VV41 709 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 MYSM1Q5VVJ2 828 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 GDF6Q6KF10 455 aaPredicted RBP9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 OTOP2Q7RTS6 562 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 RPUSD2Q8IZ73 545 aaKnown RBP9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 DHX38Q92620 1227 aaKnown RBP9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 GPKOWQ92917 476 aaPredicted RBP eCLIP9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 TIFAQ96CG3 184 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 MPHOSPH6Q99547 160 aaKnown RBP9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 ESYT1Q9BSJ8 1104 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 BACH2Q9BYV9 841 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 BCAS3Q9H6U6 928 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 LY9Q9HBG7 655 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 EYSQ5T1H1 3165 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 FRMPD4Q14CM0 1322 aa9.27□□□□□ -0.93
NPIPB4-212ENST00000540103 PITPNM1O00562 1244 aa9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 SLC27A2O14975 620 aa9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 DHX16O60231 1041 aaKnown RBP9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 HOXA13P31271 388 aaPredicted RBP9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 RBL2Q08999 1139 aa9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 SEMA3FQ13275 785 aa9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 LAMC2Q13753 1193 aa9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 ADGRE1Q14246 886 aa9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 TRIM71Q2Q1W2 868 aaKnown RBP9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 BRDTQ58F21 947 aaPredicted RBP9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 TMEM67Q5HYA8 995 aa9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 CELF3Q5SZQ8 465 aaKnown RBP9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 TRAF7Q6Q0C0 670 aa9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 SRBD1Q8N5C6 995 aaKnown RBP9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 USP38Q8NB14 1042 aa9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 MAFAQ8NHW3 353 aaPredicted RBP9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 ZFP91Q96JP5 570 aaPredicted RBP9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 SPZ1Q9BXG8 430 aa9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 COL25A1Q9BXS0 654 aaPredicted RBP9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 ANO2Q9NQ90 1003 aa9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 CHD9Q3L8U1 2897 aa9.26□□□□□ -0.93
NPIPB4-212ENST00000540103 UNC80Q8N2C7 3258 aa9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 GCOM1H8Y6P7 765 aaPredicted RBP9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 SH2B2O14492 632 aaPredicted RBP9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 MEIS2O14770 477 aa9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 PPFIA4O75335 1185 aa9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 F2P00734 622 aa9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 POLR2MP0CAP2 368 aa9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 TGFB3P10600 412 aa9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 MYOGP15173 224 aa9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 CASTP20810 708 aaKnown RBP9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 HOXC8P31273 242 aa9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 ICAM3P32942 547 aa9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 RFC2P35250 354 aa9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 LIFRP42702 1097 aa9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 PSEN2P49810 448 aa9.25□□□□□ -0.93
NPIPB4-212ENST00000540103 RABGGTBP53611 331 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms