RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CNMDO75829 334 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 OR52Z1P0C646 297 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 SREBF1P36956 1147 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TXKP42681 527 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 FAM110CQ1W6H9 321 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PLEKHH3Q7Z736 793 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PLA2G4DQ86XP0 818 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CCDC34Q96HJ3 373 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ZIC5Q96T25 663 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 EFCC1Q9HA90 598 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 A1CFQ9NQ94 594 aaKnown RBP12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PCDHA7Q9UN72 937 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ELP1O95163 1332 aa12.07□□□□□ -0.48
TNFRSF1A-211ENST00000538363 A0A0G2JMZ2 1700 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CA12O43570 354 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TLR2O60603 784 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TDP2O95551 362 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 MAP2K2P36507 400 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ZRSR1Q15695 479 aaKnown RBP12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PPP4R3AQ6IN85 833 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 XRRA1Q6P2D8 792 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 SLFN12Q8IYM2 578 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 FSIP1Q8NA03 581 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 KIF12Q96FN5 646 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ANP32EQ9BTT0 268 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PXMP2Q9NR77 195 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 LMBRD1Q9NUN5 540 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 MORF4L1Q9UBU8 362 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 SMCHD1A6NHR9 2005 aa12.06□□□□□ -0.48
TNFRSF1A-211ENST00000538363 RLFQ13129 1914 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ZSWIM8A7E2V4 1837 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TRAK2O60296 914 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 GADD45BO75293 160 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PGK2P07205 417 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 NR3C2P08235 984 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CYP3A4P08684 503 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 UBA7P41226 1012 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 VEGFBP49765 207 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 SETQ01105 290 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CRHR2Q13324 411 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PGM5Q15124 567 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PTPAQ15257 358 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 STXBP2Q15833 593 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 GNPTABQ3T906 1256 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ARL6IP4Q66PJ3 421 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ADALQ6DHV7 355 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 MOXD1Q6UVY6 613 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TMEM87AQ8NBN3 555 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 DNERQ8NFT8 737 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 MRPS27Q92552 414 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CDK5RAP3Q96JB5 506 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ZFP91Q96JP5 570 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 UIMC1Q96RL1 719 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 IWS1Q96ST2 819 aa12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 SRPRBQ9Y5M8 271 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ASB14A6NK59 587 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TNPO2O14787 897 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TRPA1O75762 1119 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PYGBP11216 843 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PRPHP41219 470 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TECP42680 631 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ATP2C1P98194 919 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CNTN2Q02246 1040 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CEP55Q53EZ4 464 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PCNX4Q63HM2 1172 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 GPR142Q7Z601 462 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ERMNQ8TAM6 284 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PURBQ96QR8 312 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 MXRA8Q9BRK3 442 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PDCD2LQ9BRP1 358 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ZNF577Q9BSK1 485 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PORCNQ9H237 461 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PKD2L1Q9P0L9 805 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CCDC39Q9UFE4 941 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PCDHA12Q9UN75 941 aa12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 RBBP6Q7Z6E9 1792 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-211ENST00000538363 MYH7BA7E2Y1 1941 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 SLC15A5A6NIM6 579 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 MAP3K13O43283 966 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 GAS7O60861 476 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 KINO60870 393 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 STAM2O75886 525 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TBC1D8O95759 1140 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 PTPREP23469 700 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ADORA2AP29274 412 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 LONP1P36776 959 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ALDH5A1P51649 535 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 FCGRTP55899 365 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 MTMR1Q13613 665 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 ARHGEF6Q15052 776 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 Q4G0T1 1027 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 SPECC1Q5M775 1068 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CALML4Q96GE6 196 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CDHR1Q96JP9 859 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 FAM20AQ96MK3 541 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 CLIC6Q96NY7 704 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 NUDT12Q9BQG2 462 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 SDF4Q9BRK5 362 aa12.03□□□□□ -0.48
TNFRSF1A-211ENST00000538363 TEKT3Q9BXF9 490 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms