RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 KIAA1217Q5T5P2 1943 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 KIF5BP33176 963 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 GNAQP50148 359 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 CCL23P55773 120 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 ANTXR2P58335 489 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 BFSP2Q13515 415 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 FAM47CQ5HY64 1035 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 PPTC7Q8NI37 304 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 TMEM87BQ96K49 555 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 PIGSQ96S52 555 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 KATNAL1Q9BW62 490 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 SPZ1Q9BXG8 430 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 PBX4Q9BYU1 374 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 ZNF576Q9H609 170 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 MRVI1Q9Y6F6 885 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 TAF6LQ9Y6J9 622 aa15.27■□□□□ 0.04
MRPS35-202ENST00000536569 CYTH3O43739 400 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 STAM2O75886 525 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 HOXD8P13378 290 aaPredicted RBP15.26■□□□□ 0.03
MRPS35-202ENST00000536569 FOSL2P15408 326 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 MCM5P33992 734 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 PGM5Q15124 567 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 SLC35G1Q2M3R5 365 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 HOMER1Q86YM7 354 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 CCDC155Q8N6L0 562 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 RETREG2Q8NC44 543 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 CTCFLQ8NI51 663 aaPredicted RBP15.26■□□□□ 0.03
MRPS35-202ENST00000536569 CAGE1Q8TC20 777 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 ESYT1Q9BSJ8 1104 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 LSG1Q9H089 658 aaKnown RBP15.26■□□□□ 0.03
MRPS35-202ENST00000536569 LY9Q9HBG7 655 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 SENP2Q9HC62 589 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 MSRAQ9UJ68 235 aa15.26■□□□□ 0.03
MRPS35-202ENST00000536569 DLL1O00548 723 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 PPFIA4O75335 1185 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 PARNO95453 639 aaKnown RBP15.25■□□□□ 0.03
MRPS35-202ENST00000536569 CALM1P0DP23 149 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 CALM2P0DP24 149 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 CALM3P0DP25 149 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 CYP2C9P11712 490 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 ACTN1P12814 892 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 CCND2P30279 289 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 LIFRP42702 1097 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 BMP2KLQ5H9B9 411 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 CENPQQ7L2Z9 268 aaPredicted RBP15.25■□□□□ 0.03
MRPS35-202ENST00000536569 CHST3Q7LGC8 479 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 DHX37Q8IY37 1157 aaKnown RBP15.25■□□□□ 0.03
MRPS35-202ENST00000536569 ZNF654Q8IZM8 581 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 MAFAQ8NHW3 353 aaPredicted RBP15.25■□□□□ 0.03
MRPS35-202ENST00000536569 MYLIPQ8WY64 445 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 KAT2BQ92831 832 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 CXXC1Q9P0U4 656 aaPredicted RBP15.25■□□□□ 0.03
MRPS35-202ENST00000536569 NOD1Q9Y239 953 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 SLC4A7Q9Y6M7 1214 aa15.25■□□□□ 0.03
MRPS35-202ENST00000536569 FRMPD4Q14CM0 1322 aa15.24■□□□□ 0.03
MRPS35-202ENST00000536569 PRC1O43663 620 aa15.24■□□□□ 0.03
MRPS35-202ENST00000536569 RGS20O76081 388 aa15.24■□□□□ 0.03
MRPS35-202ENST00000536569 HOXA13P31271 388 aaPredicted RBP15.24■□□□□ 0.03
MRPS35-202ENST00000536569 GRIN2CQ14957 1233 aa15.24■□□□□ 0.03
MRPS35-202ENST00000536569 NECTIN1Q15223 517 aa15.24■□□□□ 0.03
MRPS35-202ENST00000536569 PTGISQ16647 500 aa15.24■□□□□ 0.03
MRPS35-202ENST00000536569 CELF3Q5SZQ8 465 aaKnown RBP15.24■□□□□ 0.03
MRPS35-202ENST00000536569 OTOP2Q7RTS6 562 aa15.24■□□□□ 0.03
MRPS35-202ENST00000536569 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.24■□□□□ 0.03
MRPS35-202ENST00000536569 RRP36Q96EU6 259 aaKnown RBP15.24■□□□□ 0.03
MRPS35-202ENST00000536569 SCLYQ96I15 445 aa15.24■□□□□ 0.03
MRPS35-202ENST00000536569 CCDC69A6NI79 296 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 PIK3CDO00329 1044 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 SLC27A2O14975 620 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 F2P00734 622 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 IQCF3P0C7M6 154 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 MYCLP12524 364 aaPredicted RBP15.23■□□□□ 0.03
MRPS35-202ENST00000536569 RBL2Q08999 1139 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 GNPTABQ3T906 1256 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 RNF20Q5VTR2 975 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 MYSM1Q5VVJ2 828 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 XRRA1Q6P2D8 792 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 PHOSPHO2Q8TCD6 241 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 AFAP1L1Q8TED9 768 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 VWCEQ96DN2 955 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 SEC63Q9UGP8 760 aaKnown RBP15.23■□□□□ 0.03
MRPS35-202ENST00000536569 GTF2IRD1Q9UHL9 959 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 PCDHA11Q9Y5I1 949 aa15.23■□□□□ 0.03
MRPS35-202ENST00000536569 GRXCR1A8MXD5 290 aa15.22■□□□□ 0.03
MRPS35-202ENST00000536569 HAS3O00219 553 aa15.22■□□□□ 0.03
MRPS35-202ENST00000536569 SH2B2O14492 632 aaPredicted RBP15.22■□□□□ 0.03
MRPS35-202ENST00000536569 ICAM3P32942 547 aa15.22■□□□□ 0.03
MRPS35-202ENST00000536569 PBX2P40425 430 aa15.22■□□□□ 0.03
MRPS35-202ENST00000536569 PSEN2P49810 448 aa15.22■□□□□ 0.03
MRPS35-202ENST00000536569 CREB3L3Q68CJ9 461 aa15.22■□□□□ 0.03
MRPS35-202ENST00000536569 NFXL1Q6ZNB6 911 aa15.22■□□□□ 0.03
MRPS35-202ENST00000536569 TEX2Q8IWB9 1127 aa15.22■□□□□ 0.03
MRPS35-202ENST00000536569 C7orf31Q8N865 590 aa15.22■□□□□ 0.03
MRPS35-202ENST00000536569 CUL5Q93034 780 aa15.22■□□□□ 0.03
MRPS35-202ENST00000536569 SLC28A3Q9HAS3 691 aa15.22■□□□□ 0.03
MRPS35-202ENST00000536569 ANO2Q9NQ90 1003 aa15.22■□□□□ 0.03
MRPS35-202ENST00000536569 BAIAP3O94812 1187 aa15.21■□□□□ 0.03
MRPS35-202ENST00000536569 GGPS1O95749 300 aa15.21■□□□□ 0.03
MRPS35-202ENST00000536569 ATP2A2P16615 1042 aaKnown RBP15.21■□□□□ 0.03
MRPS35-202ENST00000536569 NEDD9Q14511 834 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms