RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 LRRC37A2A6NM11 1700 aa15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 NOP56O00567 594 aaKnown RBP15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 BAIAP3O94812 1187 aa15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 NR3C2P08235 984 aa15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 CCND2P30279 289 aa15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 LY6KQ17RY6 165 aa15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 AAK1Q2M2I8 961 aa15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 AFAP1L1Q8TED9 768 aa15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 COPS5Q92905 334 aa15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 WNT8AQ9H1J5 351 aa15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 MLXIPQ9HAP2 919 aa15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 PXMP2Q9NR77 195 aa15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 CXXC1Q9P0U4 656 aaPredicted RBP15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 THEGQ9P2T0 379 aa15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 SUPT16HQ9Y5B9 1047 aaKnown RBP15.35■□□□□ 0.05
CLSTN3-205ENST00000535452 EFCAB14O75071 495 aa15.34■□□□□ 0.05
CLSTN3-205ENST00000535452 IQCF3P0C7M6 154 aa15.34■□□□□ 0.05
CLSTN3-205ENST00000535452 PTGS1P23219 599 aa15.34■□□□□ 0.05
CLSTN3-205ENST00000535452 TMEM63BQ5T3F8 832 aa15.34■□□□□ 0.05
CLSTN3-205ENST00000535452 NFXL1Q6ZNB6 911 aa15.34■□□□□ 0.05
CLSTN3-205ENST00000535452 MICALL1Q8N3F8 863 aa15.34■□□□□ 0.05
CLSTN3-205ENST00000535452 TGFB3P10600 412 aa15.33■□□□□ 0.04
CLSTN3-205ENST00000535452 GNAQP50148 359 aa15.33■□□□□ 0.04
CLSTN3-205ENST00000535452 FCHSD1Q86WN1 690 aa15.33■□□□□ 0.04
CLSTN3-205ENST00000535452 PPTC7Q8NI37 304 aa15.33■□□□□ 0.04
CLSTN3-205ENST00000535452 SMARCC2Q8TAQ2 1214 aa15.33■□□□□ 0.04
CLSTN3-205ENST00000535452 ATXN2LQ8WWM7 1075 aaKnown RBP15.33■□□□□ 0.04
CLSTN3-205ENST00000535452 ALG1Q9BT22 464 aa15.33■□□□□ 0.04
CLSTN3-205ENST00000535452 DDX41Q9UJV9 622 aaKnown RBP15.33■□□□□ 0.04
CLSTN3-205ENST00000535452 LAMA4Q16363 1823 aa15.33■□□□□ 0.04
CLSTN3-205ENST00000535452 PNMA6FA0A0J9YX94 578 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 CCDC69A6NI79 296 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 STAM2O75886 525 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 SELPP16109 830 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 PSEN2P49810 448 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 RABGGTBP53611 331 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 MFSD10Q14728 455 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 CCDC85BQ15834 202 aaPredicted RBP15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 CCDC62Q6P9F0 684 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 LRRC8DQ7L1W4 858 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 SESTD1Q86VW0 696 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 TMTC2Q8N394 836 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 EMID1Q96A84 441 aaPredicted RBP15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 RRP36Q96EU6 259 aaKnown RBP15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 SPATA33Q96N06 139 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 LZTS2Q9BRK4 669 aa15.32■□□□□ 0.04
CLSTN3-205ENST00000535452 TLL1O43897 1013 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 PPFIA4O75335 1185 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 ARIH2O95376 493 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 GNAT1P11488 350 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 HSD17B4P51659 736 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 MRPS5P82675 430 aaKnown RBP15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 ARHGAP1Q07960 439 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 NEDD9Q14511 834 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 GRM4Q14833 912 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 KIAA0753Q2KHM9 967 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 SYNE3Q6ZMZ3 975 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 STAG2Q8N3U4 1231 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 TBC1D5Q92609 795 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 PDCD2LQ9BRP1 358 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 MAD2L2Q9UI95 211 aa15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 ZNF215Q9UL58 517 aaPredicted RBP15.31■□□□□ 0.04
CLSTN3-205ENST00000535452 PALM3A6NDB9 673 aaPredicted RBP15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 GGPS1O95749 300 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 CALM1P0DP23 149 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 CALM2P0DP24 149 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 CALM3P0DP25 149 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 HOXA13P31271 388 aaPredicted RBP15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 PTK7Q13308 1070 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 IKBKEQ14164 716 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 RNF20Q5VTR2 975 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 CNKSR3Q6P9H4 555 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 EMSYQ7Z589 1322 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 NLRX1Q86UT6 975 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 PIGSQ96S52 555 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 EHMT1Q9H9B1 1298 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 GTF2IRD1Q9UHL9 959 aa15.3■□□□□ 0.04
CLSTN3-205ENST00000535452 E7EWF7 191 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 CA3P07451 260 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 CYP21A2P08686 494 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 CHMLP26374 656 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 MCM5P33992 734 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 PGM5Q15124 567 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 SEC23AQ15436 765 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 STOX1Q6ZVD7 989 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 CYB5R4Q7L1T6 521 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 HERC6Q8IVU3 1022 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 GIMAP8Q8ND71 665 aaPredicted RBP15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 PIBF1Q8WXW3 757 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 ARNTL2Q8WYA1 636 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 COL20A1Q9P218 1284 aa15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 YBX2Q9Y2T7 364 aaKnown RBP15.29■□□□□ 0.04
CLSTN3-205ENST00000535452 ABHD14A-ACY1A0A1B0GW23 586 aa15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 C17orf102A2RUQ5 167 aa15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 DDAH1O94760 285 aa15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 F2P00734 622 aa15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 ZNF286BP0CG31 522 aa15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 GSPT1P15170 499 aaKnown RBP15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 CELF3Q5SZQ8 465 aaKnown RBP15.28■□□□□ 0.04
CLSTN3-205ENST00000535452 GDF6Q6KF10 455 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms