RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 JPH2Q9BR39 696 aaPredicted RBP7.55□□□□□ -1.2
RAG1-203ENST00000534663 SEMA6BQ9H3T3 888 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 MYH6P13533 1939 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 C4AP0C0L4 1744 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 C4BP0C0L5 1744 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 BAZ2AQ9UIF9 1905 aaKnown RBP7.55□□□□□ -1.2
RAG1-203ENST00000534663 LOC102724428A0A0B4J2F2 783 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 EIF3HO15372 352 aaKnown RBP eCLIP7.55□□□□□ -1.2
RAG1-203ENST00000534663 SIK1P57059 783 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 IFFO1Q0D2I5 559 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 PARP10Q53GL7 1025 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 SFMBT2Q5VUG0 894 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 TRMT1LQ7Z2T5 733 aaKnown RBP7.55□□□□□ -1.2
RAG1-203ENST00000534663 TXNRD3Q86VQ6 643 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 RETREG2Q8NC44 543 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 SH3RF3Q8TEJ3 882 aaPredicted RBP7.55□□□□□ -1.2
RAG1-203ENST00000534663 LRRC15Q8TF66 581 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 ARPP21Q9UBL0 812 aaPredicted RBP7.55□□□□□ -1.2
RAG1-203ENST00000534663 SALL4Q9UJQ4 1053 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 AKAP11Q9UKA4 1901 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 MPHOSPH10O00566 681 aaKnown RBP7.55□□□□□ -1.2
RAG1-203ENST00000534663 FGFR1OPO95684 399 aaKnown RBP7.55□□□□□ -1.2
RAG1-203ENST00000534663 GNA11P29992 359 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 AARSP49588 968 aaKnown RBP eCLIP7.55□□□□□ -1.2
RAG1-203ENST00000534663 RPS8P62241 208 aaKnown RBP7.55□□□□□ -1.2
RAG1-203ENST00000534663 PAK2Q13177 524 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 HERC4Q5GLZ8 1057 aaPredicted RBP7.55□□□□□ -1.2
RAG1-203ENST00000534663 MMS22LQ6ZRQ5 1243 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 CLEC10AQ8IUN9 316 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 LRRC47Q8N1G4 583 aaKnown RBP7.55□□□□□ -1.2
RAG1-203ENST00000534663 KIAA0895Q8NCT3 520 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 UHMK1Q8TAS1 419 aaKnown RBP7.55□□□□□ -1.2
RAG1-203ENST00000534663 ZNF384Q8TF68 577 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 LARP4BQ92615 738 aaKnown RBP7.55□□□□□ -1.2
RAG1-203ENST00000534663 NLRP3Q96P20 1036 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 TMEM47Q9BQJ4 181 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 MTA3Q9BTC8 594 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 DPH5Q9H2P9 285 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 KBTBD4Q9NVX7 518 aa7.55□□□□□ -1.2
RAG1-203ENST00000534663 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.55□□□□□ -1.2
RAG1-203ENST00000534663 MYMKA6NI61 221 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 CYTH3O43739 400 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 TDP2O95551 362 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 NR1D1P20393 614 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 UBE4AQ14139 1066 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 KCNB1Q14721 858 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 MAN2A1Q16706 1144 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 TTMPQ5BVD1 217 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 HAUS3Q68CZ6 603 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 RNPC3Q96LT9 517 aaKnown RBP7.54□□□□□ -1.2
RAG1-203ENST00000534663 SCLT1Q96NL6 688 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 ANAPC4Q9UJX5 808 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 SIPA1L3O60292 1781 aaPredicted RBP7.54□□□□□ -1.2
RAG1-203ENST00000534663 HGSO14964 777 aaPredicted RBP7.54□□□□□ -1.2
RAG1-203ENST00000534663 USP8P40818 1118 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 UBE2SQ16763 222 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 MIIPQ5JXC2 388 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 RCSD1Q6JBY9 416 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 TAX1BP1Q86VP1 789 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 DDX12PQ92771 950 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 CCDC114Q96M63 670 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 EYA3Q99504 573 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 PACSIN1Q9BY11 444 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 RAB34Q9BZG1 259 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 IL17RBQ9NRM6 502 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 ATP8A2Q9NTI2 1148 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 PLAGL2Q9UPG8 496 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 MYH7P12883 1935 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 CAMTA1Q9Y6Y1 1673 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 RASSF10A6NK89 507 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 KLRC1P26715 233 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 CTNNA1P35221 906 aaKnown RBP7.54□□□□□ -1.2
RAG1-203ENST00000534663 IKQ13123 557 aaPredicted RBP7.54□□□□□ -1.2
RAG1-203ENST00000534663 LLGL1Q15334 1064 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 DDB1Q16531 1140 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 MEA1Q16626 185 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 KRT25Q7Z3Z0 450 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 SLC51AQ86UW1 340 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 C4orf32Q8N8J7 132 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 CERKQ8TCT0 537 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 AENQ8WTP8 325 aaKnown RBP7.54□□□□□ -1.2
RAG1-203ENST00000534663 CCSER1Q9C0I3 900 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 PLAAQ9Y263 795 aa7.54□□□□□ -1.2
RAG1-203ENST00000534663 SPEF2Q9C093 1822 aa7.53□□□□□ -1.2
RAG1-203ENST00000534663 BAG3O95817 575 aa7.53□□□□□ -1.2
RAG1-203ENST00000534663 RPS6KA1Q15418 735 aa7.53□□□□□ -1.2
RAG1-203ENST00000534663 EMBQ6PCB8 327 aa7.53□□□□□ -1.2
RAG1-203ENST00000534663 TMED8Q6PL24 325 aaPredicted RBP7.53□□□□□ -1.2
RAG1-203ENST00000534663 B4GALNT4Q76KP1 1039 aa7.53□□□□□ -1.2
RAG1-203ENST00000534663 MYOCDQ8IZQ8 938 aa7.53□□□□□ -1.2
RAG1-203ENST00000534663 KAT2BQ92831 832 aa7.53□□□□□ -1.2
RAG1-203ENST00000534663 TLR10Q9BXR5 811 aa7.53□□□□□ -1.2
RAG1-203ENST00000534663 DDX47Q9H0S4 455 aaKnown RBP7.53□□□□□ -1.2
RAG1-203ENST00000534663 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.53□□□□□ -1.2
RAG1-203ENST00000534663 BARHL2Q9NY43 387 aa7.53□□□□□ -1.2
RAG1-203ENST00000534663 ZNF335Q9H4Z2 1342 aaPredicted RBP7.53□□□□□ -1.2
RAG1-203ENST00000534663 NPHP3-ACAD11A0A0J9YXS1 232 aa7.53□□□□□ -1.2
RAG1-203ENST00000534663 STXBP3O00186 592 aa7.53□□□□□ -1.2
RAG1-203ENST00000534663 NTSR2O95665 410 aa7.53□□□□□ -1.2
RAG1-203ENST00000534663 FECHP22830 423 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms