RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 NETO2Q8NC67 525 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 GSTCDQ8NEC7 633 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 IRF2BPLQ9H1B7 796 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 C19orf73Q9NVV2 129 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 DDX56Q9NY93 547 aaKnown RBP4.78□□□□□ -1.64
CSMD3-210ENST00000534172 YBX2Q9Y2T7 364 aaKnown RBP4.78□□□□□ -1.64
CSMD3-210ENST00000534172 SRGAP3O43295 1099 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 MAFKO60675 156 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 PRKCAP17252 672 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 NTRK3Q16288 839 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 KCNMB1Q16558 191 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 ZSWIM9Q86XI8 627 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 CPNE8Q86YQ8 564 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 AHI1Q8N157 1196 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 Q8N1Y9 231 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 UBE2Q2Q8WVN8 375 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 NINJ1Q92982 152 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 X6R8D5 127 aa4.78□□□□□ -1.64
CSMD3-210ENST00000534172 FAM47E-STBD1D6RA91 191 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 ZBTB7AO95365 584 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 ASLP04424 464 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 MPOP05164 745 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 ITGB5P18084 799 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 MASP1P48740 699 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 PRSS53Q2L4Q9 553 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 CYP4F22Q6NT55 531 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 MTDHQ86UE4 582 aaKnown RBP4.77□□□□□ -1.65
CSMD3-210ENST00000534172 RCBTB1Q8NDN9 531 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 USP33Q8TEY7 942 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 TRMT2BQ96GJ1 504 aaKnown RBP4.77□□□□□ -1.65
CSMD3-210ENST00000534172 TMEM169Q96HH4 297 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 SP110Q9HB58 689 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 IMPACTQ9P2X3 320 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 NDOR1Q9UHB4 597 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 C6orf222P0C671 652 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-210ENST00000534172 ERVFRD-1P60508 538 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 PAK1Q13153 545 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 FAM47CQ5HY64 1035 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 UBE2R2Q712K3 238 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-210ENST00000534172 DCP2Q8IU60 420 aaKnown RBP4.77□□□□□ -1.65
CSMD3-210ENST00000534172 EPB41L1Q9H4G0 881 aa4.77□□□□□ -1.65
CSMD3-210ENST00000534172 CYBBP04839 570 aa4.76□□□□□ -1.65
CSMD3-210ENST00000534172 SPIRE1Q08AE8 756 aa4.76□□□□□ -1.65
CSMD3-210ENST00000534172 PABPC4Q13310 644 aaKnown RBP eCLIP4.76□□□□□ -1.65
CSMD3-210ENST00000534172 SLC9A5Q14940 896 aa4.76□□□□□ -1.65
CSMD3-210ENST00000534172 DENND5AQ6IQ26 1287 aa4.76□□□□□ -1.65
CSMD3-210ENST00000534172 PAQR3Q6TCH7 311 aa4.76□□□□□ -1.65
CSMD3-210ENST00000534172 ANKLE2Q86XL3 938 aa4.76□□□□□ -1.65
CSMD3-210ENST00000534172 PEX11GQ96HA9 241 aa4.76□□□□□ -1.65
CSMD3-210ENST00000534172 CHAMP1Q96JM3 812 aa4.76□□□□□ -1.65
CSMD3-210ENST00000534172 MTA3Q9BTC8 594 aa4.76□□□□□ -1.65
CSMD3-210ENST00000534172 EBF1Q9UH73 591 aa4.76□□□□□ -1.65
CSMD3-210ENST00000534172 TMEFF2Q9UIK5 374 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-210ENST00000534172 PCDHA2Q9Y5H9 948 aa4.76□□□□□ -1.65
CSMD3-210ENST00000534172 WNT9AO14904 365 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 DGKIO75912 1065 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 SLC6A11P48066 632 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 CEBPAP49715 358 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-210ENST00000534172 GUCY1A3Q02108 690 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 MVKQ03426 396 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 CBX2Q14781 532 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-210ENST00000534172 INF2Q27J81 1249 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 CCDC181Q5TID7 509 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 MFSD3Q96ES6 412 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 AP5M1Q9H0R1 490 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 CLDND1Q9NY35 253 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 CHPF2Q9P2E5 772 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 OR14I1A6ND48 311 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 IGFALSP35858 605 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 BICRALQ6AI39 1079 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 CEP68Q76N32 757 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 DDX53Q86TM3 631 aaKnown RBP4.75□□□□□ -1.65
CSMD3-210ENST00000534172 CCDC103Q8IW40 242 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 SEC14L1Q92503 715 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 FBXW5Q969U6 566 aa4.75□□□□□ -1.65
CSMD3-210ENST00000534172 INTS4Q96HW7 963 aaKnown RBP4.75□□□□□ -1.65
CSMD3-210ENST00000534172 G3BP2Q9UN86 482 aaKnown RBP4.75□□□□□ -1.65
CSMD3-210ENST00000534172 NOTOA8MTQ0 251 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 C22orf46C9J442 243 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 RBAK-RBAKDNI3L0D1 243 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 ARVCFO00192 962 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 KRIT1O00522 736 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 PSPNO60542 156 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 FUCA1P04066 466 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 S100BP04271 92 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-210ENST00000534172 GRK2P25098 689 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 GRK3P35626 688 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 BCL6P41182 706 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 NIM1KQ8IY84 436 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 PHOSPHO1Q8TCT1 267 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 RNF32Q9H0A6 362 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 SLC52A2Q9HAB3 445 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 TNFRSF12AQ9NP84 129 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 SOD2P04179 222 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 VIL1P09327 827 aaKnown RBP4.74□□□□□ -1.65
CSMD3-210ENST00000534172 PDGFRBP09619 1106 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 ERVFC1P60507 584 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 DALRD3Q5D0E6 543 aaKnown RBP4.74□□□□□ -1.65
CSMD3-210ENST00000534172 KCNT2Q6UVM3 1135 aa4.74□□□□□ -1.65
CSMD3-210ENST00000534172 C16orf59Q7L2K0 433 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms