RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 PFKFB3Q16875 520 aaPredicted RBP19.21■□□□□ 0.67
PHRF1-205ENST00000533464 MIGA2Q7L4E1 593 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 FOXP4Q8IVH2 680 aaPredicted RBP19.21■□□□□ 0.67
PHRF1-205ENST00000533464 THAP9Q9H5L6 903 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 PTPRMP28827 1452 aa19.21■□□□□ 0.67
PHRF1-205ENST00000533464 CEP152O94986 1710 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 CASP1P29466 404 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 CLEC17AQ6ZS10 378 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 ARHGAP27Q6ZUM4 889 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 SH3GLB2Q9NR46 395 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 RIPOR2Q9Y4F9 1068 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 RGS16O15492 202 aaPredicted RBP19.2■□□□□ 0.66
PHRF1-205ENST00000533464 GUCY2DQ02846 1103 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 KRT31Q15323 416 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 ATP6V0A1Q93050 837 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 VPS37BQ9H9H4 285 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 PLCB1Q9NQ66 1216 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 NRBP2Q9NSY0 501 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.2■□□□□ 0.662e-6■■■■■ 34.4
PHRF1-205ENST00000533464 YARSP54577 528 aaKnown RBP19.2■□□□□ 0.66
PHRF1-205ENST00000533464 HHATQ5VTY9 493 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 PHLPP2Q6ZVD8 1323 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 HOXA13P31271 388 aaPredicted RBP19.2■□□□□ 0.66
PHRF1-205ENST00000533464 GTF2A1P52655 376 aaPredicted RBP19.2■□□□□ 0.66
PHRF1-205ENST00000533464 FYB2Q5VWT5 728 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 SARM1Q6SZW1 724 aa19.2■□□□□ 0.66
PHRF1-205ENST00000533464 ALDH8A1Q9H2A2 487 aaPredicted RBP19.2■□□□□ 0.66
PHRF1-205ENST00000533464 STIM2Q9P246 746 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 TNNC2P02585 160 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 LACTBP83111 547 aaPredicted RBP19.19■□□□□ 0.66
PHRF1-205ENST00000533464 CUL4BQ13620 913 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 ZNF579Q8NAF0 562 aaKnown RBP19.19■□□□□ 0.66
PHRF1-205ENST00000533464 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.19■□□□□ 0.66
PHRF1-205ENST00000533464 USP17L5A8MUK1 530 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 KCNQ2O43526 872 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 TMEM191BP0C7N4 346 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 ITIH3Q06033 890 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 MTA3Q9BTC8 594 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 ANO3Q9BYT9 981 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 PPANQ9NQ55 473 aaKnown RBP19.19■□□□□ 0.66
PHRF1-205ENST00000533464 RAB20Q9NX57 234 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 SEPT9Q9UHD8 586 aaPredicted RBP19.19■□□□□ 0.66
PHRF1-205ENST00000533464 ADCY8P40145 1251 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 PPP2R5DQ14738 602 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 TCP11X2Q5H9J9 407 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 NT5C1BQ96P26 610 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 UBN2Q6ZU65 1347 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 ABCA9Q8IUA7 1624 aa19.19■□□□□ 0.66
PHRF1-205ENST00000533464 LMNB1P20700 586 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 CYP27A1Q02318 531 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 NDST4Q9H3R1 872 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 NSFP46459 744 aaKnown RBP19.18■□□□□ 0.66
PHRF1-205ENST00000533464 SNAP25P60880 206 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 MRPS9P82933 396 aaKnown RBP19.18■□□□□ 0.66
PHRF1-205ENST00000533464 CASC4Q6P4E1 433 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 LRRN2O75325 713 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 CHGBP05060 677 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 ATF7P17544 494 aaPredicted RBP19.18■□□□□ 0.66
PHRF1-205ENST00000533464 PSMD2Q13200 908 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 FAM133AQ8N9E0 248 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 ARHGEF1Q92888 912 aaKnown RBP19.18■□□□□ 0.66
PHRF1-205ENST00000533464 NDUFA10O95299 355 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 PTK2Q05397 1052 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 MESDQ14696 234 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 PANX2Q96RD6 677 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 MMS19Q96T76 1030 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 KRT12Q99456 494 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 PCIF1Q9H4Z3 704 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 PDE11AQ9HCR9 933 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 SPTLC3Q9NUV7 552 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 USP42Q9H9J4 1324 aaKnown RBP19.18■□□□□ 0.66
PHRF1-205ENST00000533464 EIF4A3P38919 411 aaKnown RBP19.18■□□□□ 0.66
PHRF1-205ENST00000533464 RCAN1P53805 252 aa19.18■□□□□ 0.66
PHRF1-205ENST00000533464 DCPSQ96C86 337 aaKnown RBP19.18■□□□□ 0.66
PHRF1-205ENST00000533464 M0QZ92 97 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 SEPT2Q15019 361 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 VSIG1Q86XK7 387 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 MASTLQ96GX5 879 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 GH2P01242 217 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 ATP1A2P50993 1020 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 MFAP3P55082 362 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 ZSCAN26Q16670 478 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 SGMS1Q86VZ5 419 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 SLC7A3Q8WY07 619 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 FAM84BQ96KN1 310 aaPredicted RBP19.17■□□□□ 0.66
PHRF1-205ENST00000533464 ADPGKQ9BRR6 497 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 NHEJ1Q9H9Q4 299 aaPredicted RBP19.17■□□□□ 0.66
PHRF1-205ENST00000533464 ZMYND10O75800 440 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 SEC31AO94979 1220 aaKnown RBP19.17■□□□□ 0.66
PHRF1-205ENST00000533464 GNGT1P63211 74 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 CCDC93Q567U6 631 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 MGARPQ8TDB4 240 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 PARVGQ9HBI0 331 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 MKRN1Q9UHC7 482 aaKnown RBP19.17■□□□□ 0.66
PHRF1-205ENST00000533464 USP14P54578 494 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 DPY19L2Q6NUT2 758 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 TMED8Q6PL24 325 aaPredicted RBP19.17■□□□□ 0.66
PHRF1-205ENST00000533464 TMEM179Q6ZVK1 233 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 ANKRD42Q8N9B4 389 aa19.17■□□□□ 0.66
PHRF1-205ENST00000533464 UHMK1Q8TAS1 419 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms