RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 CCND2P30279 289 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 SREBF1P36956 1147 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 MNX1P50219 401 aaPredicted RBP6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 NKX3-2P78367 333 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 MRPS9P82933 396 aaKnown RBP6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 HMGN5P82970 282 aaKnown RBP6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 CUL4AQ13619 759 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 STXBP2Q15833 593 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 ARHGEF16Q5VV41 709 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 PCNX4Q63HM2 1172 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 MCTP2Q6DN12 878 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 GALNT17Q6IS24 598 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 XRRA1Q6P2D8 792 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 UBE2Q1Q7Z7E8 422 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 REXO1Q8N1G1 1221 aaKnown RBP6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 ANKLE1Q8NAG6 615 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 BICD2Q8TD16 824 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 SCFD2Q8WU76 684 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 WASF1Q92558 559 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 SNX21Q969T3 373 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 LENG1Q96BZ8 264 aaPredicted RBP6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 INPP4AQ96PE3 977 aaPredicted RBP6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 UPF3AQ9H1J1 476 aaKnown RBP6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 PDGFCQ9NRA1 345 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 GJB4Q9NTQ9 266 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 PCDHA6Q9UN73 950 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 PCDHA4Q9UN74 947 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 GNEQ9Y223 722 aaKnown RBP6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 PCDHA8Q9Y5H6 950 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 SYNRGQ9UMZ2 1314 aa6.49□□□□□ -1.37
RPUSD4-204ENST00000530036 CEP290O15078 2479 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 CTAGE5O15320 804 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 DUSP11O75319 330 aaKnown RBP6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 EIF3JO75822 258 aaKnown RBP6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 ARIH2O95376 493 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 RARBP10826 455 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 SMPD1P17405 629 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 XBP1P17861 261 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 EN2P19622 333 aaPredicted RBP6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 CST5P28325 142 aaPredicted RBP6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 CNGA1P29973 690 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 ADCYAP1R1P41586 468 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 NLRP5P59047 1200 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 TNFAIP2Q03169 654 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 DUSP28Q4G0W2 176 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 TMEM63BQ5T3F8 832 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 JAKMIP3Q5VZ66 844 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 IQSEC1Q6DN90 963 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 CCDC62Q6P9F0 684 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 EEPD1Q7L9B9 569 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 BLIDQ8IZY5 108 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 RASGRP4Q8TDF6 673 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 TNFRSF25Q93038 417 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 PGBD1Q96JS3 809 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 ALG1Q9BT22 464 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 EHMT1Q9H9B1 1298 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 TMEM260Q9NX78 707 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 FAM184BQ9ULE4 1060 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 KCNJ14Q9UNX9 436 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 Q9Y3F1 56 aa6.48□□□□□ -1.37
RPUSD4-204ENST00000530036 IGLV3-22A0A075B6J6 115 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 K7ELQ4 463 aaPredicted RBP6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 NKRFO15226 690 aaKnown RBP eCLIP6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 EDIL3O43854 480 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 FARP2O94887 1054 aaPredicted RBP6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 MMP1P03956 469 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 CYP3A4P08684 503 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 COL6A1P12109 1028 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 MYCLP12524 364 aaPredicted RBP6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 PTGS1P23219 599 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 ICAM3P32942 547 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 GJA9P57773 515 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 ARHGAP4P98171 946 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 ARHGAP1Q07960 439 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 SEMA3FQ13275 785 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 TTLL4Q14679 1199 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 LRRC41Q15345 812 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 GNPTABQ3T906 1256 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 GJC2Q5T442 439 aaPredicted RBP6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 ANO1Q5XXA6 986 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 KRT40Q6A162 431 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 CCSAPQ6IQ19 270 aaPredicted RBP6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 KCNV1Q6PIU1 500 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 KRT25Q7Z3Z0 450 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 TLK2Q86UE8 772 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 KLHDC9Q8NEP7 349 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 FBXO18Q8NFZ0 1043 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 OXER1Q8TDS5 423 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 EMID1Q96A84 441 aaPredicted RBP6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 GPRASP2Q96D09 838 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 WDR11Q9BZH6 1224 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 XPNPEP3Q9NQH7 507 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 DDX41Q9UJV9 622 aaKnown RBP6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 UBIAD1Q9Y5Z9 338 aa6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 MYH9P35579 1960 aaKnown RBP6.47□□□□□ -1.37
RPUSD4-204ENST00000530036 MYADML2A6NDP7 307 aa6.46□□□□□ -1.38
RPUSD4-204ENST00000530036 A6NJR5 290 aa6.46□□□□□ -1.38
RPUSD4-204ENST00000530036 SPATA31C2B4DYI2 1134 aa6.46□□□□□ -1.38
RPUSD4-204ENST00000530036 FAM86B1E9PN63 330 aa6.46□□□□□ -1.38
RPUSD4-204ENST00000530036 DNM1LO00429 736 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms