RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 B4DLN1 442 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 KBTBD13C9JR72 458 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 PRC1O43663 620 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 REC8O95072 547 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 RARBP10826 455 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 AKR1A1P14550 325 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 MRPL12P52815 198 aaKnown RBP8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 CNTN2Q02246 1040 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 TRAF1Q13077 416 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 ACVR2BQ13705 512 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 KRT32Q14532 448 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 USH1GQ495M9 461 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 ANO1Q5XXA6 986 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 BRICD5Q6PL45 260 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 RNF207Q6ZRF8 634 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 FBXO11Q86XK2 927 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 MB21D2Q8IYB1 491 aaPredicted RBP8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 STAG2Q8N3U4 1231 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 FAM133AQ8N9E0 248 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 NEK1Q96PY6 1258 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 MPHOSPH6Q99547 160 aaKnown RBP8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 MAF1Q9H063 256 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 CPVLQ9H3G5 476 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 ABHD16BQ9H3Z7 469 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 CYP39A1Q9NYL5 469 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 ADD3Q9UEY8 706 aaKnown RBP8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 MAD2L2Q9UI95 211 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 FAM184BQ9ULE4 1060 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 NR2E3Q9Y5X4 410 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 KIAA1217Q5T5P2 1943 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 CEP290O15078 2479 aa8.34□□□□□ -1.08
PTP4A2-210ENST00000528253 ABCB11O95342 1321 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 DNM1LO00429 736 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 NFIBO00712 420 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 SNAI1O95863 264 aaPredicted RBP8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 HMGB1P09429 215 aaKnown RBP8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 ZNF865P0CJ78 1059 aaPredicted RBP8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 CALM1P0DP23 149 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 CALM2P0DP24 149 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 CALM3P0DP25 149 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 TAL1P17542 331 aaPredicted RBP8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 KIF5BP33176 963 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 LIFRP42702 1097 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 ANTXR2P58335 489 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 BAATQ14032 418 aaPredicted RBP8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 GRM4Q14833 912 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 CDC37Q16543 378 aaPredicted RBP8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 QRICH1Q2TAL8 776 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 TSGA10IPQ3SY00 556 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 BLOC1S3Q6QNY0 202 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 LYPD8Q6UX82 237 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 RNF19BQ6ZMZ0 732 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 SYNE3Q6ZMZ3 975 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 ARMCX2Q7L311 632 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 RNF180Q86T96 592 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 MCF2L2Q86YR7 1114 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 SCUBE3Q8IX30 993 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 CCDC144CPQ8IYA2 1237 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 RGS22Q8NE09 1264 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 CTCFLQ8NI51 663 aaPredicted RBP8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 DIS3LQ8TF46 1054 aaKnown RBP8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 NUP133Q8WUM0 1156 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 GLMNQ92990 594 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 MAP3K14Q99558 947 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 SENP6Q9GZR1 1112 aaPredicted RBP8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 JMJD4Q9H9V9 463 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 LY9Q9HBG7 655 aa8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 ZHX1Q9UKY1 873 aaPredicted RBP8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 MRPL11Q9Y3B7 192 aaKnown RBP8.33□□□□□ -1.08
PTP4A2-210ENST00000528253 LOC102724159A0A0B4J2E5 919 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 ZBTB5O15062 677 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 DDAH1O94760 285 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 CALML3P27482 149 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 GNAQP50148 359 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 FGD1P98174 961 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 TROAPQ12815 778 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 PWP2Q15269 919 aaKnown RBP8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 CCDC144BQ3MJ40 725 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 GJC2Q5T442 439 aaPredicted RBP8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 THSD4Q6ZMP0 1018 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 DHX32Q7L7V1 743 aaKnown RBP8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 ZNF654Q8IZM8 581 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 CLEC4DQ8WXI8 215 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 LZTS2Q9BRK4 669 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 AMNQ9BXJ7 453 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 SPC25Q9HBM1 224 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 SENP2Q9HC62 589 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 XPNPEP3Q9NQH7 507 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 SLC12A7Q9Y666 1083 aa8.32□□□□□ -1.08
PTP4A2-210ENST00000528253 PNMA6FA0A0J9YX94 578 aa8.31□□□□□ -1.08
PTP4A2-210ENST00000528253 SH2B2O14492 632 aaPredicted RBP8.31□□□□□ -1.08
PTP4A2-210ENST00000528253 DUSP11O75319 330 aaKnown RBP8.31□□□□□ -1.08
PTP4A2-210ENST00000528253 COL6A1P12109 1028 aa8.31□□□□□ -1.08
PTP4A2-210ENST00000528253 SMARCA1P28370 1054 aa8.31□□□□□ -1.08
PTP4A2-210ENST00000528253 ALDH5A1P51649 535 aaPredicted RBP8.31□□□□□ -1.08
PTP4A2-210ENST00000528253 RPS6P62753 249 aaKnown RBP8.31□□□□□ -1.08
PTP4A2-210ENST00000528253 LRRC41Q15345 812 aa8.31□□□□□ -1.08
PTP4A2-210ENST00000528253 NR6A1Q15406 480 aa8.31□□□□□ -1.08
PTP4A2-210ENST00000528253 IQSEC1Q6DN90 963 aa8.31□□□□□ -1.08
PTP4A2-210ENST00000528253 NOL8Q76FK4 1167 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms