RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 TTLL4Q14679 1199 aa12.91□□□□□ -0.34
NR1H3-230ENST00000527949 PPP2R5BQ15173 497 aa12.91□□□□□ -0.34
NR1H3-230ENST00000527949 TSGA10IPQ3SY00 556 aa12.91□□□□□ -0.34
NR1H3-230ENST00000527949 TMEM67Q5HYA8 995 aa12.91□□□□□ -0.34
NR1H3-230ENST00000527949 CCDC62Q6P9F0 684 aa12.91□□□□□ -0.34
NR1H3-230ENST00000527949 EEPD1Q7L9B9 569 aa12.91□□□□□ -0.34
NR1H3-230ENST00000527949 OTOP2Q7RTS6 562 aa12.91□□□□□ -0.34
NR1H3-230ENST00000527949 CATIPQ7Z7H3 387 aa12.91□□□□□ -0.34
NR1H3-230ENST00000527949 LZTS2Q9BRK4 669 aa12.91□□□□□ -0.34
NR1H3-230ENST00000527949 SPZ1Q9BXG8 430 aa12.91□□□□□ -0.34
NR1H3-230ENST00000527949 PNMA6FA0A0J9YX94 578 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 SLC27A2O14975 620 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 ACTN1P12814 892 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 ATP2A2P16615 1042 aaKnown RBP12.9□□□□□ -0.34
NR1H3-230ENST00000527949 HOXD11P31277 338 aaPredicted RBP12.9□□□□□ -0.34
NR1H3-230ENST00000527949 KIF5BP33176 963 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 GNAQP50148 359 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 BEX3Q00994 111 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 SKIV2LQ15477 1246 aaKnown RBP12.9□□□□□ -0.34
NR1H3-230ENST00000527949 STXBP2Q15833 593 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 SLC35G1Q2M3R5 365 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 RNF20Q5VTR2 975 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 CASC1Q6TDU7 716 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 CXCL17Q6UXB2 119 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 TEX2Q8IWB9 1127 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 TAAR1Q96RJ0 339 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 RMDN3Q96TC7 470 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 NOC4LQ9BVI4 516 aaKnown RBP12.9□□□□□ -0.34
NR1H3-230ENST00000527949 LY9Q9HBG7 655 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 YBX2Q9Y2T7 364 aaKnown RBP12.9□□□□□ -0.34
NR1H3-230ENST00000527949 PCDHA1Q9Y5I3 950 aa12.9□□□□□ -0.34
NR1H3-230ENST00000527949 GRIN2DO15399 1336 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 CYTH3O43739 400 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 PPP1R11O60927 126 aaPredicted RBP12.89□□□□□ -0.35
NR1H3-230ENST00000527949 EIF3JO75822 258 aaKnown RBP12.89□□□□□ -0.35
NR1H3-230ENST00000527949 CALM1P0DP23 149 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 CALM2P0DP24 149 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 CALM3P0DP25 149 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 RFC2P35250 354 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 PURAQ00577 322 aaKnown RBP12.89□□□□□ -0.35
NR1H3-230ENST00000527949 PTPN11Q06124 597 aaPredicted RBP12.89□□□□□ -0.35
NR1H3-230ENST00000527949 CREB3L3Q68CJ9 461 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 KCNV1Q6PIU1 500 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 SGMS1Q86VZ5 419 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 ZNF654Q8IZM8 581 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 PHOSPHO2Q8TCD6 241 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 TBC1D5Q92609 795 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 EMID1Q96A84 441 aaPredicted RBP12.89□□□□□ -0.35
NR1H3-230ENST00000527949 SENP2Q9HC62 589 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 VAT1LQ9HCJ6 419 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 PXMP2Q9NR77 195 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 COL20A1Q9P218 1284 aa12.89□□□□□ -0.35
NR1H3-230ENST00000527949 DDX49Q9Y6V7 483 aaKnown RBP12.89□□□□□ -0.35
NR1H3-230ENST00000527949 ZBBXA8MT70 800 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 KIF28PB7ZC32 967 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 SH2B2O14492 632 aaPredicted RBP12.88□□□□□ -0.35
NR1H3-230ENST00000527949 PRC1O43663 620 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 CDC45O75419 566 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 NR3C2P08235 984 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 TXNP10599 105 aaKnown RBP12.88□□□□□ -0.35
NR1H3-230ENST00000527949 CCL23P55773 120 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 NFRKBQ6P4R8 1299 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 MICALL1Q8N3F8 863 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 OR6J1Q8NGC5 347 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 CTCFLQ8NI51 663 aaPredicted RBP12.88□□□□□ -0.35
NR1H3-230ENST00000527949 SLC9A7Q96T83 725 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 PDCD2LQ9BRP1 358 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 MTG1Q9BT17 334 aaPredicted RBP12.88□□□□□ -0.35
NR1H3-230ENST00000527949 ANO2Q9NQ90 1003 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 RAPGEFL1Q9UHV5 662 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 FRMPD4Q14CM0 1322 aa12.88□□□□□ -0.35
NR1H3-230ENST00000527949 B4GALT4O60513 344 aa12.87□□□□□ -0.35
NR1H3-230ENST00000527949 STAM2O75886 525 aa12.87□□□□□ -0.35
NR1H3-230ENST00000527949 CFBP00751 764 aa12.87□□□□□ -0.35
NR1H3-230ENST00000527949 GH1P01241 217 aa12.87□□□□□ -0.35
NR1H3-230ENST00000527949 TGFB3P10600 412 aa12.87□□□□□ -0.35
NR1H3-230ENST00000527949 TMEM31Q5JXX7 168 aa12.87□□□□□ -0.35
NR1H3-230ENST00000527949 TMEM63BQ5T3F8 832 aa12.87□□□□□ -0.35
NR1H3-230ENST00000527949 ARHGEF16Q5VV41 709 aa12.87□□□□□ -0.35
NR1H3-230ENST00000527949 VSIG10LQ86VR7 867 aa12.87□□□□□ -0.35
NR1H3-230ENST00000527949 PIGSQ96S52 555 aa12.87□□□□□ -0.35
NR1H3-230ENST00000527949 ALDH8A1Q9H2A2 487 aaPredicted RBP12.87□□□□□ -0.35
NR1H3-230ENST00000527949 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
NR1H3-230ENST00000527949 GCOM1H8Y6P7 765 aaPredicted RBP12.86□□□□□ -0.35
NR1H3-230ENST00000527949 PIK3CDO00329 1044 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 EPB41L2O43491 1005 aaKnown RBP12.86□□□□□ -0.35
NR1H3-230ENST00000527949 ARIH2O95376 493 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 POLR2MP0CAP2 368 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 HOXD8P13378 290 aaPredicted RBP12.86□□□□□ -0.35
NR1H3-230ENST00000527949 RABGGTBP53611 331 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 RCAN1P53805 252 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 ARHGAP1Q07960 439 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 KRT32Q14532 448 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 XRRA1Q6P2D8 792 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 CHST3Q7LGC8 479 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 SESTD1Q86VW0 696 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 KCNB2Q92953 911 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 HLA-CQ95604 372 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 RRP36Q96EU6 259 aaKnown RBP12.86□□□□□ -0.35
NR1H3-230ENST00000527949 TRPV6Q9H1D0 765 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms