RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 FAM47CQ5HY64 1035 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 CENPQQ7L2Z9 268 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-212ENST00000527887 SESTD1Q86VW0 696 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 HOMER1Q86YM7 354 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 CTCFLQ8NI51 663 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-212ENST00000527887 AFG1LQ8WV93 481 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 TIFAQ96CG3 184 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 PIGSQ96S52 555 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 ESYT1Q9BSJ8 1104 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 LSG1Q9H089 658 aaKnown RBP16.44■□□□□ 0.22
CAPN1-212ENST00000527887 TRMT13Q9NUP7 481 aaKnown RBP16.44■□□□□ 0.22
CAPN1-212ENST00000527887 MRVI1Q9Y6F6 885 aa16.44■□□□□ 0.22
CAPN1-212ENST00000527887 CYTH3O43739 400 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 STAM2O75886 525 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 MMP3P08254 477 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 LIFRP42702 1097 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 ANTXR2P58335 489 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 BFSP2Q13515 415 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 RAB30Q15771 203 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 BMP2KLQ5H9B9 411 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 CHST3Q7LGC8 479 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 RETREG2Q8NC44 543 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 PPTC7Q8NI37 304 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 KATNAL1Q9BW62 490 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 WNT8AQ9H1J5 351 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 LY9Q9HBG7 655 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 NOD1Q9Y239 953 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 TAF6LQ9Y6J9 622 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 UMODL1Q5DID0 1318 aa16.43■□□□□ 0.22
CAPN1-212ENST00000527887 PPFIA4O75335 1185 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 CALM1P0DP23 149 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 CALM2P0DP24 149 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 CALM3P0DP25 149 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 CYP2C9P11712 490 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 CCND2P30279 289 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 PGM5Q15124 567 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 NECTIN1Q15223 517 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 SLC35G1Q2M3R5 365 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 DHX37Q8IY37 1157 aaKnown RBP16.42■□□□□ 0.22
CAPN1-212ENST00000527887 ZNF654Q8IZM8 581 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 CCDC155Q8N6L0 562 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 ZNF576Q9H609 170 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 SENP2Q9HC62 589 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 MSRAQ9UJ68 235 aa16.42■□□□□ 0.22
CAPN1-212ENST00000527887 PRC1O43663 620 aa16.41■□□□□ 0.22
CAPN1-212ENST00000527887 PARNO95453 639 aaKnown RBP16.41■□□□□ 0.22
CAPN1-212ENST00000527887 RNF20Q5VTR2 975 aa16.41■□□□□ 0.22
CAPN1-212ENST00000527887 CAGE1Q8TC20 777 aa16.41■□□□□ 0.22
CAPN1-212ENST00000527887 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
CAPN1-212ENST00000527887 PBX4Q9BYU1 374 aa16.41■□□□□ 0.22
CAPN1-212ENST00000527887 CCDC69A6NI79 296 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 SLC27A2O14975 620 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 MYCLP12524 364 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-212ENST00000527887 ACTN1P12814 892 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 HOXD8P13378 290 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-212ENST00000527887 FOSL2P15408 326 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 HOXA13P31271 388 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-212ENST00000527887 GNPTABQ3T906 1256 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 CELF3Q5SZQ8 465 aaKnown RBP16.4■□□□□ 0.22
CAPN1-212ENST00000527887 MYSM1Q5VVJ2 828 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 CREB3L3Q68CJ9 461 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 XRRA1Q6P2D8 792 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 NFXL1Q6ZNB6 911 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 OTOP2Q7RTS6 562 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 MYLIPQ8WY64 445 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 KAT2BQ92831 832 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 ANO2Q9NQ90 1003 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 SEC63Q9UGP8 760 aaKnown RBP16.4■□□□□ 0.22
CAPN1-212ENST00000527887 SLC4A7Q9Y6M7 1214 aa16.4■□□□□ 0.22
CAPN1-212ENST00000527887 PIK3CDO00329 1044 aa16.39■□□□□ 0.21
CAPN1-212ENST00000527887 SH2B2O14492 632 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-212ENST00000527887 RGS20O76081 388 aa16.39■□□□□ 0.21
CAPN1-212ENST00000527887 F2P00734 622 aa16.39■□□□□ 0.21
CAPN1-212ENST00000527887 IQCF3P0C7M6 154 aa16.39■□□□□ 0.21
CAPN1-212ENST00000527887 PTGISQ16647 500 aa16.39■□□□□ 0.21
CAPN1-212ENST00000527887 FCHSD1Q86WN1 690 aa16.39■□□□□ 0.21
CAPN1-212ENST00000527887 MAFAQ8NHW3 353 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-212ENST00000527887 CUL5Q93034 780 aa16.39■□□□□ 0.21
CAPN1-212ENST00000527887 SCLYQ96I15 445 aa16.39■□□□□ 0.21
CAPN1-212ENST00000527887 CXXC1Q9P0U4 656 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-212ENST00000527887 FRMPD4Q14CM0 1322 aa16.39■□□□□ 0.21
CAPN1-212ENST00000527887 SCN10AQ9Y5Y9 1956 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 HAS3O00219 553 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 DLL1O00548 723 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 ICAM3P32942 547 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 PSEN2P49810 448 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 RBL2Q08999 1139 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 GRIN2CQ14957 1233 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 SGMS1Q86VZ5 419 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 TEX2Q8IWB9 1127 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.38■□□□□ 0.21
CAPN1-212ENST00000527887 C7orf31Q8N865 590 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 PHOSPHO2Q8TCD6 241 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 AFAP1L1Q8TED9 768 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 VWCEQ96DN2 955 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 MLXIPQ9HAP2 919 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 GTF2IRD1Q9UHL9 959 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 SLC12A7Q9Y666 1083 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 UNC80Q8N2C7 3258 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms