RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 TGFBRAP1Q8WUH2 860 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 DCP1AQ9NPI6 582 aaPredicted RBP13.88□□□□□ -0.19
CAPN1-208ENST00000527323 KBTBD4Q9NVX7 518 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
CAPN1-208ENST00000527323 PCDHA13Q9Y5I0 950 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
CAPN1-208ENST00000527323 MYH2Q9UKX2 1941 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 ORC4O43929 436 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 BBOX1O75936 387 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 LDHBP07195 334 aaKnown RBP13.87□□□□□ -0.19
CAPN1-208ENST00000527323 ERCC3P19447 782 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 CREG2Q8IUH2 290 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 RRP36Q96EU6 259 aaKnown RBP13.87□□□□□ -0.19
CAPN1-208ENST00000527323 TTYH3Q9C0H2 523 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 EHD4Q9H223 541 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 MCM9Q9NXL9 1143 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 SMARCAL1Q9NZC9 954 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.87□□□□□ -0.19
CAPN1-208ENST00000527323 ATP6V0A2Q9Y487 856 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 OPA1O60313 960 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 MYL1P05976 194 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 FGRP09769 529 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 GNGT1P63211 74 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 PPFIA1Q13136 1202 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 ICE2Q659A1 982 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 CERS5Q8N5B7 392 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 PNMA1Q8ND90 353 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 SPATA4Q8NEY3 305 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 HPS3Q969F9 1004 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 ALS2CR12Q96Q35 445 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 CCSER1Q9C0I3 900 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 FAM107BQ9H098 131 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 CAPN6Q9Y6Q1 641 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 CICQ96RK0 1608 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-208ENST00000527323 A0A087WUV0 522 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-208ENST00000527323 SHTN1A0MZ66 631 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 FAM196BA6NMK8 535 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 ZNF263O14978 683 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 TCP10Q12799 353 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 LETM2Q2VYF4 491 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 NFRKBQ6P4R8 1299 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 ZNF804AQ7Z570 1209 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 TMX4Q9H1E5 349 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-208ENST00000527323 SLC39A2Q9NP94 309 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 PCDHA6Q9UN73 950 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 BCS1LQ9Y276 419 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 PCDHA8Q9Y5H6 950 aa13.87□□□□□ -0.19
CAPN1-208ENST00000527323 HSF2BPO75031 334 aa13.86□□□□□ -0.19
CAPN1-208ENST00000527323 EIF4A3P38919 411 aaKnown RBP13.86□□□□□ -0.19
CAPN1-208ENST00000527323 LIG3P49916 1009 aa13.86□□□□□ -0.19
CAPN1-208ENST00000527323 DNA2P51530 1060 aa13.86□□□□□ -0.19
CAPN1-208ENST00000527323 TADA2BQ86TJ2 420 aa13.86□□□□□ -0.19
CAPN1-208ENST00000527323 MMGT1Q8N4V1 131 aa13.86□□□□□ -0.19
CAPN1-208ENST00000527323 FLAD1Q8NFF5 587 aa13.86□□□□□ -0.19
CAPN1-208ENST00000527323 AENQ8WTP8 325 aaKnown RBP13.86□□□□□ -0.19
CAPN1-208ENST00000527323 EHD2Q9NZN4 543 aa13.86□□□□□ -0.19
CAPN1-208ENST00000527323 MAGEA1P43355 309 aa13.86□□□□□ -0.19
CAPN1-208ENST00000527323 RRAGAQ7L523 313 aa13.86□□□□□ -0.19
CAPN1-208ENST00000527323 OSBPL9Q96SU4 736 aa13.86□□□□□ -0.19
CAPN1-208ENST00000527323 GOLGA8KD6RF30 607 aa13.85□□□□□ -0.19
CAPN1-208ENST00000527323 KIF11P52732 1056 aa13.85□□□□□ -0.19
CAPN1-208ENST00000527323 AMPD3Q01432 767 aa13.85□□□□□ -0.19
CAPN1-208ENST00000527323 TRIM9Q9C026 710 aa13.85□□□□□ -0.19
CAPN1-208ENST00000527323 MKNK2Q9HBH9 465 aa13.85□□□□□ -0.19
CAPN1-208ENST00000527323 NKRFO15226 690 aaKnown RBP eCLIP13.85□□□□□ -0.19
CAPN1-208ENST00000527323 NCK2O43639 380 aa13.85□□□□□ -0.19
CAPN1-208ENST00000527323 CCNT1O60563 726 aaKnown RBP13.85□□□□□ -0.19
CAPN1-208ENST00000527323 TCP1P17987 556 aaKnown RBP13.85□□□□□ -0.19
CAPN1-208ENST00000527323 TECP42680 631 aa13.85□□□□□ -0.19
CAPN1-208ENST00000527323 MIIPQ5JXC2 388 aa13.85□□□□□ -0.19
CAPN1-208ENST00000527323 NLGN2Q8NFZ4 835 aa13.85□□□□□ -0.19
CAPN1-208ENST00000527323 PURBQ96QR8 312 aaKnown RBP13.85□□□□□ -0.19
CAPN1-208ENST00000527323 SH3GLB2Q9NR46 395 aa13.85□□□□□ -0.19
CAPN1-208ENST00000527323 HYOU1Q9Y4L1 999 aa13.85□□□□□ -0.19
CAPN1-208ENST00000527323 BAZ2AQ9UIF9 1905 aaKnown RBP13.85□□□□□ -0.19
CAPN1-208ENST00000527323 TNS1Q9HBL0 1735 aaKnown RBP13.85□□□□□ -0.19
CAPN1-208ENST00000527323 HOXA10P31260 410 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-208ENST00000527323 RCSD1Q6JBY9 416 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 LRRC15Q8TF66 581 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 ERGIC2Q96RQ1 377 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 CRAMP1Q96RY5 1269 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 TANGO6Q9C0B7 1094 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 SH2D4AQ9H788 454 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 ATP8A2Q9NTI2 1148 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 ARHGAP20Q9P2F6 1191 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 LEMD3Q9Y2U8 911 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 SAMM50Q9Y512 469 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 FAM169AQ9Y6X4 670 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 SLX4Q8IY92 1834 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 ERLIN2O94905 339 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 GNAQP50148 359 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 ATP2B2Q01814 1243 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 C8orf74Q6P047 294 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 CNNM4Q6P4Q7 775 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 CACNA2D4Q7Z3S7 1137 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 UPF1Q92900 1129 aaKnown RBP eCLIP13.84□□□□□ -0.192e-10■■■■□ 24.6
CAPN1-208ENST00000527323 STX8Q9UNK0 236 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 PLAGL2Q9UPG8 496 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 BUB1O43683 1085 aa13.84□□□□□ -0.19
CAPN1-208ENST00000527323 SHOX2O60902 331 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms