RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 RALYLQ86SE5 291 aaKnown RBP12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 SESTD1Q86VW0 696 aa12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 CCDC155Q8N6L0 562 aa12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 NCOA7Q8NI08 942 aa12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 AFG1LQ8WV93 481 aa12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 RIOX1Q9H6W3 641 aa12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 DDX41Q9UJV9 622 aaKnown RBP12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 NOD1Q9Y239 953 aa12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 PCDHA11Q9Y5I1 949 aa12.89□□□□□ -0.35
AMBRA1-204ENST00000526545 OPLAHO14841 1288 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 SGSM2O43147 1006 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 CDC45O75419 566 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 IQCF3P0C7M6 154 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 TGFB3P10600 412 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 ATP2A2P16615 1042 aaKnown RBP12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 EIF2AK2P19525 551 aaKnown RBP12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 PTH1RQ03431 593 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 GRM4Q14833 912 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 SKAP1Q86WV1 359 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 PPTC7Q8NI37 304 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 PHOSPHO2Q8TCD6 241 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 SYMPKQ92797 1274 aaKnown RBP12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 VWCEQ96DN2 955 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 KATNAL1Q9BW62 490 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 MRVI1Q9Y6F6 885 aa12.88□□□□□ -0.35
AMBRA1-204ENST00000526545 PNMA6FA0A0J9YX94 578 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 ZBBXA8MT70 800 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 E7EWF7 191 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 PPP1R11O60927 126 aaPredicted RBP12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 PPFIA4O75335 1185 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 PARNO95453 639 aaKnown RBP12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 TROAPQ12815 778 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 WTAPQ15007 396 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 PTGISQ16647 500 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 CHST3Q7LGC8 479 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 DEFB128Q7Z7B8 93 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 VSIG10LQ86VR7 867 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 DHX37Q8IY37 1157 aaKnown RBP12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 CAGE1Q8TC20 777 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 MAP4K1Q92918 833 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 MAP3K14Q99558 947 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 PDCD2LQ9BRP1 358 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 PRDM12Q9H4Q4 367 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 SCN10AQ9Y5Y9 1956 aa12.87□□□□□ -0.35
AMBRA1-204ENST00000526545 GCOM1H8Y6P7 765 aaPredicted RBP12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 POLR2MP0CAP2 368 aa12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 CHMP4BP1P59074 171 aa12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 PGM5Q15124 567 aa12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 CATIPQ7Z7H3 387 aa12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 C7orf31Q8N865 590 aa12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 AFAP1L1Q8TED9 768 aa12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 KAT2BQ92831 832 aa12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 SLC9A7Q96T83 725 aa12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 ESYT1Q9BSJ8 1104 aa12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 MTA3Q9BTC8 594 aa12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 FTOQ9C0B1 505 aaKnown RBP eCLIP12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 NKX2-4Q9H2Z4 354 aa12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 YBX2Q9Y2T7 364 aaKnown RBP12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 VCANP13611 3396 aa12.86□□□□□ -0.35
AMBRA1-204ENST00000526545 EIF5BO60841 1220 aaKnown RBP12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 STAM2O75886 525 aa12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 BAIAP3O94812 1187 aa12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 MYCLP12524 364 aaPredicted RBP12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 HOXD8P13378 290 aaPredicted RBP12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 SMARCA1P28370 1054 aa12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 CCND2P30279 289 aa12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 HOXA13P31271 388 aaPredicted RBP12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 RBL2Q08999 1139 aa12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 TMEM67Q5HYA8 995 aa12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 CELF3Q5SZQ8 465 aaKnown RBP12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 MYSM1Q5VVJ2 828 aa12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 GDF6Q6KF10 455 aaPredicted RBP12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 HOMER1Q86YM7 354 aa12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 TMTC2Q8N394 836 aa12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 PIGSQ96S52 555 aa12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 GTF2IRD1Q9UHL9 959 aa12.85□□□□□ -0.35
AMBRA1-204ENST00000526545 HAS3O00219 553 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 CYTH3O43739 400 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 RGS20O76081 388 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 F2P00734 622 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 SELPP16109 830 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 KIF5BP33176 963 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 PSEN2P49810 448 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 RABGGTBP53611 331 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 PTK7Q13308 1070 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 MFSD10Q14728 455 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 KIAA0753Q2KHM9 967 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 PPP2R2DQ66LE6 453 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 PPP1R13LQ8WUF5 828 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 ATXN2LQ8WWM7 1075 aaKnown RBP12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 CTAGE1Q96RT6 745 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 LZTS2Q9BRK4 669 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 SENP2Q9HC62 589 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 HDAC6Q9UBN7 1215 aa12.84□□□□□ -0.35
AMBRA1-204ENST00000526545 KIF28PB7ZC32 967 aa12.83□□□□□ -0.36
AMBRA1-204ENST00000526545 IGFBP4P22692 258 aa12.83□□□□□ -0.36
AMBRA1-204ENST00000526545 GNAQP50148 359 aa12.83□□□□□ -0.36
AMBRA1-204ENST00000526545 SLC35G1Q2M3R5 365 aa12.83□□□□□ -0.36
AMBRA1-204ENST00000526545 GNPTABQ3T906 1256 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms