RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 TNFAIP2Q03169 654 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 PPARAQ07869 468 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 FSCN1Q16658 493 aaKnown RBP12.53□□□□□ -0.4
MRPS28-208ENST00000521605 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
MRPS28-208ENST00000521605 TLK2Q86UE8 772 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 HERC6Q8IVU3 1022 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 ANKRD35Q8N283 1001 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 NECAB1Q8N987 351 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 NSUN7Q8NE18 718 aaKnown RBP12.53□□□□□ -0.4
MRPS28-208ENST00000521605 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 SLC9A7Q96T83 725 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 PHOX2BQ99453 314 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 NUP88Q99567 741 aaPredicted RBP12.53□□□□□ -0.4
MRPS28-208ENST00000521605 ZSCAN16Q9H4T2 348 aaPredicted RBP12.53□□□□□ -0.4
MRPS28-208ENST00000521605 UBE2ZQ9H832 354 aaPredicted RBP12.53□□□□□ -0.4
MRPS28-208ENST00000521605 SWAP70Q9UH65 585 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 MTUS1Q9ULD2 1270 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 KIF28PB7ZC32 967 aa12.52□□□□□ -0.41
MRPS28-208ENST00000521605 CABYRO75952 493 aa12.52□□□□□ -0.41
MRPS28-208ENST00000521605 PFKMP08237 780 aa12.52□□□□□ -0.41
MRPS28-208ENST00000521605 APOBRQ0VD83 1088 aa12.52□□□□□ -0.41
MRPS28-208ENST00000521605 CPLX2Q6PUV4 134 aaKnown RBP12.52□□□□□ -0.41
MRPS28-208ENST00000521605 ESR2Q92731 530 aa12.52□□□□□ -0.41
MRPS28-208ENST00000521605 FGD4Q96M96 766 aa12.52□□□□□ -0.41
MRPS28-208ENST00000521605 SLF1Q9BQI6 1058 aa12.52□□□□□ -0.41
MRPS28-208ENST00000521605 FTOQ9C0B1 505 aaKnown RBP eCLIP12.52□□□□□ -0.41
MRPS28-208ENST00000521605 AP5M1Q9H0R1 490 aa12.52□□□□□ -0.41
MRPS28-208ENST00000521605 GOPCQ9HD26 462 aa12.52□□□□□ -0.41
MRPS28-208ENST00000521605 TRMT13Q9NUP7 481 aaKnown RBP12.52□□□□□ -0.41
MRPS28-208ENST00000521605 CTDP1Q9Y5B0 961 aaPredicted RBP12.52□□□□□ -0.41
MRPS28-208ENST00000521605 SCN5AQ14524 2016 aa12.52□□□□□ -0.41
MRPS28-208ENST00000521605 LCHNA4D1U4 455 aa12.51□□□□□ -0.41
MRPS28-208ENST00000521605 DYNC1LI2O43237 492 aaPredicted RBP12.51□□□□□ -0.41
MRPS28-208ENST00000521605 PRKAB2O43741 272 aa12.51□□□□□ -0.41
MRPS28-208ENST00000521605 CCDC178Q5BJE1 867 aa12.51□□□□□ -0.41
MRPS28-208ENST00000521605 PTCRAQ6ISU1 281 aaPredicted RBP12.51□□□□□ -0.41
MRPS28-208ENST00000521605 TMCO2Q7Z6W1 182 aaPredicted RBP12.51□□□□□ -0.41
MRPS28-208ENST00000521605 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.51□□□□□ -0.41
MRPS28-208ENST00000521605 KATNBL1Q9H079 304 aa12.51□□□□□ -0.41
MRPS28-208ENST00000521605 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
MRPS28-208ENST00000521605 RAVER2Q9HCJ3 691 aaKnown RBP12.51□□□□□ -0.41
MRPS28-208ENST00000521605 DCP1AQ9NPI6 582 aaPredicted RBP12.51□□□□□ -0.41
MRPS28-208ENST00000521605 HOMER2Q9NSB8 354 aa12.51□□□□□ -0.41
MRPS28-208ENST00000521605 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.51□□□□□ -0.41
MRPS28-208ENST00000521605 DDX49Q9Y6V7 483 aaKnown RBP12.51□□□□□ -0.41
MRPS28-208ENST00000521605 ZNF536O15090 1300 aa12.51□□□□□ -0.41
MRPS28-208ENST00000521605 NEDD4P46934 1319 aa12.51□□□□□ -0.41
MRPS28-208ENST00000521605 STK36Q9NRP7 1315 aa12.51□□□□□ -0.41
MRPS28-208ENST00000521605 CYP2D7A0A087X1C5 515 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 KLF18A0A0U1RQI7 1052 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 CCDC196A0A1B0GTZ2 297 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 PTPDC1A2A3K4 754 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 DCXO43602 365 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 ZEB2O60315 1214 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 CTDNEP1O95476 244 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 CNTN2Q02246 1040 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 LEXMQ3ZCV2 418 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 MCTP1Q6DN14 999 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 APOA5Q6Q788 366 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 CYB5R4Q7L1T6 521 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 FAM184AQ8NB25 1140 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 PHOSPHO2Q8TCD6 241 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 ZSWIM5Q9P217 1185 aa12.5□□□□□ -0.41
MRPS28-208ENST00000521605 USP34Q70CQ2 3546 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 TNKSO95271 1327 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 ERICH2A1L162 156 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 GOLGA8BA8MQT2 603 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 B4E1Z4 1266 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 SMPD1P17405 629 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 CDK8P49336 464 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 NKX3-2P78367 333 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 FAM47CQ5HY64 1035 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 TMEM63BQ5T3F8 832 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 CTR9Q6PD62 1173 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 HFE2Q6ZVN8 426 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 EEPD1Q7L9B9 569 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 AMOTL1Q8IY63 956 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 KIFC2Q96AC6 838 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
MRPS28-208ENST00000521605 ZBED2Q9BTP6 218 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 LRRC2Q9BYS8 371 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 KCNH6Q9H252 994 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 KANSL2Q9H9L4 492 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 ZNF287Q9HBT7 754 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 BRPF3Q9ULD4 1205 aa12.49□□□□□ -0.41
MRPS28-208ENST00000521605 GNEQ9Y223 722 aaKnown RBP12.49□□□□□ -0.41
MRPS28-208ENST00000521605 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.48□□□□□ -0.41
MRPS28-208ENST00000521605 IFIT3O14879 490 aaKnown RBP12.48□□□□□ -0.41
MRPS28-208ENST00000521605 ZBTB43O43298 467 aa12.48□□□□□ -0.41
MRPS28-208ENST00000521605 ZBED4O75132 1171 aa12.48□□□□□ -0.41
MRPS28-208ENST00000521605 KDM4AO75164 1064 aa12.48□□□□□ -0.41
MRPS28-208ENST00000521605 KRT85P78386 507 aa12.48□□□□□ -0.41
MRPS28-208ENST00000521605 PDE4BQ07343 736 aa12.48□□□□□ -0.41
MRPS28-208ENST00000521605 SEC23AQ15436 765 aa12.48□□□□□ -0.41
MRPS28-208ENST00000521605 C12orf60Q5U649 245 aa12.48□□□□□ -0.41
MRPS28-208ENST00000521605 SYNE3Q6ZMZ3 975 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms