RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 CCND2P30279 289 aa18.68■□□□□ 0.58
IGHV3-42-201ENST00000520410 MCM5P33992 734 aa18.68■□□□□ 0.58
IGHV3-42-201ENST00000520410 HSD17B4P51659 736 aa18.68■□□□□ 0.58
IGHV3-42-201ENST00000520410 CENPQQ7L2Z9 268 aaPredicted RBP18.68■□□□□ 0.58
IGHV3-42-201ENST00000520410 RRP36Q96EU6 259 aaKnown RBP18.68■□□□□ 0.58
IGHV3-42-201ENST00000520410 PDCD2LQ9BRP1 358 aa18.68■□□□□ 0.58
IGHV3-42-201ENST00000520410 FTOQ9C0B1 505 aaKnown RBP eCLIP18.68■□□□□ 0.58
IGHV3-42-201ENST00000520410 MSRAQ9UJ68 235 aa18.68■□□□□ 0.58
IGHV3-42-201ENST00000520410 DLL1O00548 723 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 OPLAHO14841 1288 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 SLC27A2O14975 620 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 RXRAP19793 462 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 PBX2P40425 430 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 ARHGAP1Q07960 439 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 PGM5Q15124 567 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 DGKDQ16760 1214 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 NFRKBQ6P4R8 1299 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 CCDC62Q6P9F0 684 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 MAFAQ8NHW3 353 aaPredicted RBP18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 SMARCC2Q8TAQ2 1214 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 CUL5Q93034 780 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 LSG1Q9H089 658 aaKnown RBP18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 RIOX1Q9H6W3 641 aa18.67■□□□□ 0.58
IGHV3-42-201ENST00000520410 TMEM265A0A087WTH1 108 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 DDAH1O94760 285 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 ZNF286BP0CG31 522 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 TROAPQ12815 778 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 PTGISQ16647 500 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 CREB3L3Q68CJ9 461 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 CCDC155Q8N6L0 562 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 C7orf31Q8N865 590 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 IGDCC4Q8TDY8 1250 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 MTMR8Q96EF0 704 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 LRRC2Q9BYS8 371 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 PBX4Q9BYU1 374 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 ZNF576Q9H609 170 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 LY9Q9HBG7 655 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 MAP3K20Q9NYL2 800 aaKnown RBP18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 DDX41Q9UJV9 622 aaKnown RBP18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 SLC4A7Q9Y6M7 1214 aa18.66■□□□□ 0.58
IGHV3-42-201ENST00000520410 CYTH3O43739 400 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 ACTN1P12814 892 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 PTPN11Q06124 597 aaPredicted RBP18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 BFSP2Q13515 415 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 LAMC2Q13753 1193 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 RAB30Q15771 203 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 SLC35G1Q2M3R5 365 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 RNF20Q5VTR2 975 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 SYNE3Q6ZMZ3 975 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 IL31RAQ8NI17 732 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 HERVK_113Q902F9 699 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 TMEM87BQ96K49 555 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 SPATA33Q96N06 139 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 KATNAL1Q9BW62 490 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 MLXIPQ9HAP2 919 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 CXXC1Q9P0U4 656 aaPredicted RBP18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 SLC12A7Q9Y666 1083 aa18.65■□□□□ 0.58
IGHV3-42-201ENST00000520410 SH2B2O14492 632 aaPredicted RBP18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 GGPS1O95749 300 aa18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 PSEN2P49810 448 aa18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 GNAQP50148 359 aa18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 GRIN2CQ14957 1233 aa18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 KCNV1Q6PIU1 500 aa18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 CMTR1Q8N1G2 835 aaKnown RBP18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 CCDC82Q8N4S0 544 aa18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 SAMD3Q8N6K7 520 aa18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 PPM1EQ8WY54 764 aa18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 GAS2L1Q99501 681 aaPredicted RBP18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 NKX2-4Q9H2Z4 354 aa18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 NAP1L2Q9ULW6 460 aaPredicted RBP18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 LAMA3Q16787 3333 aa18.64■□□□□ 0.57
IGHV3-42-201ENST00000520410 NOP56O00567 594 aaKnown RBP18.63■□□□□ 0.57
IGHV3-42-201ENST00000520410 PLEKHA8P1O95397 391 aa18.63■□□□□ 0.57
IGHV3-42-201ENST00000520410 CALM1P0DP23 149 aa18.63■□□□□ 0.57
IGHV3-42-201ENST00000520410 CALM2P0DP24 149 aa18.63■□□□□ 0.57
IGHV3-42-201ENST00000520410 CALM3P0DP25 149 aa18.63■□□□□ 0.57
IGHV3-42-201ENST00000520410 MFSD10Q14728 455 aa18.63■□□□□ 0.57
IGHV3-42-201ENST00000520410 GNPTABQ3T906 1256 aa18.63■□□□□ 0.57
IGHV3-42-201ENST00000520410 MICU3Q86XE3 530 aa18.63■□□□□ 0.57
IGHV3-42-201ENST00000520410 TMTC2Q8N394 836 aa18.63■□□□□ 0.57
IGHV3-42-201ENST00000520410 SLC28A3Q9HAS3 691 aa18.63■□□□□ 0.57
IGHV3-42-201ENST00000520410 RTEL1Q9NZ71 1219 aa18.63■□□□□ 0.57
IGHV3-42-201ENST00000520410 PFKMP08237 780 aa18.62■□□□□ 0.57
IGHV3-42-201ENST00000520410 RABGGTBP53611 331 aa18.62■□□□□ 0.57
IGHV3-42-201ENST00000520410 KIAA0753Q2KHM9 967 aa18.62■□□□□ 0.57
IGHV3-42-201ENST00000520410 BMP2KLQ5H9B9 411 aa18.62■□□□□ 0.57
IGHV3-42-201ENST00000520410 GDF6Q6KF10 455 aaPredicted RBP18.62■□□□□ 0.57
IGHV3-42-201ENST00000520410 PPTC7Q8NI37 304 aa18.62■□□□□ 0.57
IGHV3-42-201ENST00000520410 LZTS2Q9BRK4 669 aa18.62■□□□□ 0.57
IGHV3-42-201ENST00000520410 SPZ1Q9BXG8 430 aa18.62■□□□□ 0.57
IGHV3-42-201ENST00000520410 hCG_1642624A0A1W2PR95 340 aa18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 CDC45O75419 566 aa18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 ATP2A2P16615 1042 aaKnown RBP18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 UBA1P22314 1058 aaKnown RBP18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 RFC2P35250 354 aa18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 FGD1P98174 961 aa18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 SP4Q02446 784 aa18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 RASIP1Q5U651 963 aa18.61■□□□□ 0.57
IGHV3-42-201ENST00000520410 VSIG10LQ86VR7 867 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms