RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 SMARCA1P28370 1054 aa29.34■■■□□ 2.29
VEGFA-220ENST00000519767 KIF5BP33176 963 aa29.34■■■□□ 2.29
VEGFA-220ENST00000519767 DGKDQ16760 1214 aa29.34■■■□□ 2.29
VEGFA-220ENST00000519767 LSG1Q9H089 658 aaKnown RBP29.34■■■□□ 2.29
VEGFA-220ENST00000519767 MRVI1Q9Y6F6 885 aa29.34■■■□□ 2.29
VEGFA-220ENST00000519767 HOXA13P31271 388 aaPredicted RBP29.33■■■□□ 2.29
VEGFA-220ENST00000519767 MCM5P33992 734 aa29.33■■■□□ 2.29
VEGFA-220ENST00000519767 RETREG2Q8NC44 543 aa29.33■■■□□ 2.29
VEGFA-220ENST00000519767 LZTS2Q9BRK4 669 aa29.33■■■□□ 2.29
VEGFA-220ENST00000519767 ESYT1Q9BSJ8 1104 aa29.33■■■□□ 2.29
VEGFA-220ENST00000519767 ZNF576Q9H609 170 aa29.33■■■□□ 2.29
VEGFA-220ENST00000519767 DLL1O00548 723 aa29.32■■■□□ 2.28
VEGFA-220ENST00000519767 PITPNM1O00562 1244 aa29.32■■■□□ 2.28
VEGFA-220ENST00000519767 TGFB3P10600 412 aa29.32■■■□□ 2.28
VEGFA-220ENST00000519767 MYCLP12524 364 aaPredicted RBP29.32■■■□□ 2.28
VEGFA-220ENST00000519767 DHX37Q8IY37 1157 aaKnown RBP29.32■■■□□ 2.28
VEGFA-220ENST00000519767 CTCFLQ8NI51 663 aaPredicted RBP29.32■■■□□ 2.28
VEGFA-220ENST00000519767 MYLIPQ8WY64 445 aa29.32■■■□□ 2.28
VEGFA-220ENST00000519767 LY9Q9HBG7 655 aa29.32■■■□□ 2.28
VEGFA-220ENST00000519767 MSRAQ9UJ68 235 aa29.32■■■□□ 2.28
VEGFA-220ENST00000519767 NOD1Q9Y239 953 aa29.32■■■□□ 2.28
VEGFA-220ENST00000519767 PRC1O43663 620 aa29.31■■■□□ 2.28
VEGFA-220ENST00000519767 DDAH1O94760 285 aa29.31■■■□□ 2.28
VEGFA-220ENST00000519767 RFC2P35250 354 aa29.31■■■□□ 2.28
VEGFA-220ENST00000519767 GNAQP50148 359 aa29.31■■■□□ 2.28
VEGFA-220ENST00000519767 BFSP2Q13515 415 aa29.31■■■□□ 2.28
VEGFA-220ENST00000519767 RAB30Q15771 203 aa29.31■■■□□ 2.28
VEGFA-220ENST00000519767 OTOP2Q7RTS6 562 aa29.31■■■□□ 2.28
VEGFA-220ENST00000519767 SESTD1Q86VW0 696 aa29.31■■■□□ 2.28
VEGFA-220ENST00000519767 TMEM87BQ96K49 555 aa29.31■■■□□ 2.28
VEGFA-220ENST00000519767 PBX4Q9BYU1 374 aa29.31■■■□□ 2.28
VEGFA-220ENST00000519767 CXXC1Q9P0U4 656 aaPredicted RBP29.31■■■□□ 2.28
VEGFA-220ENST00000519767 GRXCR1A8MXD5 290 aa29.3■■■□□ 2.28
VEGFA-220ENST00000519767 PGM5Q15124 567 aa29.3■■■□□ 2.28
VEGFA-220ENST00000519767 CENPQQ7L2Z9 268 aaPredicted RBP29.3■■■□□ 2.28
VEGFA-220ENST00000519767 ZNF654Q8IZM8 581 aa29.3■■■□□ 2.28
VEGFA-220ENST00000519767 MAFAQ8NHW3 353 aaPredicted RBP29.3■■■□□ 2.28
VEGFA-220ENST00000519767 PPTC7Q8NI37 304 aa29.3■■■□□ 2.28
VEGFA-220ENST00000519767 SCLYQ96I15 445 aa29.3■■■□□ 2.28
VEGFA-220ENST00000519767 SPZ1Q9BXG8 430 aa29.3■■■□□ 2.28
VEGFA-220ENST00000519767 SLC4A7Q9Y6M7 1214 aa29.3■■■□□ 2.28
VEGFA-220ENST00000519767 SCN10AQ9Y5Y9 1956 aa29.3■■■□□ 2.28
VEGFA-220ENST00000519767 PPFIA4O75335 1185 aa29.29■■■□□ 2.28
VEGFA-220ENST00000519767 FOSL2P15408 326 aa29.29■■■□□ 2.28
VEGFA-220ENST00000519767 CCND2P30279 289 aa29.29■■■□□ 2.28
VEGFA-220ENST00000519767 CHMP4BP1P59074 171 aa29.29■■■□□ 2.28
VEGFA-220ENST00000519767 GRIN2CQ14957 1233 aa29.29■■■□□ 2.28
VEGFA-220ENST00000519767 NECTIN1Q15223 517 aa29.29■■■□□ 2.28
VEGFA-220ENST00000519767 BMP2KLQ5H9B9 411 aa29.29■■■□□ 2.28
VEGFA-220ENST00000519767 FCHSD1Q86WN1 690 aa29.29■■■□□ 2.28
VEGFA-220ENST00000519767 KAT2BQ92831 832 aa29.29■■■□□ 2.28
VEGFA-220ENST00000519767 RRP36Q96EU6 259 aaKnown RBP29.29■■■□□ 2.28
VEGFA-220ENST00000519767 MYH6P13533 1939 aa29.29■■■□□ 2.28
VEGFA-220ENST00000519767 SLC27A2O14975 620 aa29.28■■■□□ 2.28
VEGFA-220ENST00000519767 RGS20O76081 388 aa29.28■■■□□ 2.28
VEGFA-220ENST00000519767 LIFRP42702 1097 aa29.28■■■□□ 2.28
VEGFA-220ENST00000519767 PTGISQ16647 500 aa29.28■■■□□ 2.28
VEGFA-220ENST00000519767 NFXL1Q6ZNB6 911 aa29.28■■■□□ 2.28
VEGFA-220ENST00000519767 CCDC155Q8N6L0 562 aa29.28■■■□□ 2.28
VEGFA-220ENST00000519767 KATNAL1Q9BW62 490 aa29.28■■■□□ 2.28
VEGFA-220ENST00000519767 CHD9Q3L8U1 2897 aa29.27■■■□□ 2.28
VEGFA-220ENST00000519767 CCDC69A6NI79 296 aa29.27■■■□□ 2.28
VEGFA-220ENST00000519767 CALM1P0DP23 149 aa29.27■■■□□ 2.28
VEGFA-220ENST00000519767 CALM2P0DP24 149 aa29.27■■■□□ 2.28
VEGFA-220ENST00000519767 CALM3P0DP25 149 aa29.27■■■□□ 2.28
VEGFA-220ENST00000519767 PBX2P40425 430 aa29.27■■■□□ 2.28
VEGFA-220ENST00000519767 MYSM1Q5VVJ2 828 aa29.27■■■□□ 2.28
VEGFA-220ENST00000519767 CREB3L3Q68CJ9 461 aa29.27■■■□□ 2.28
VEGFA-220ENST00000519767 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.27■■■□□ 2.283e-13■■□□□ 13.7
VEGFA-220ENST00000519767 VWCEQ96DN2 955 aa29.27■■■□□ 2.28
VEGFA-220ENST00000519767 ANO2Q9NQ90 1003 aa29.27■■■□□ 2.28
VEGFA-220ENST00000519767 STAM2O75886 525 aa29.26■■■□□ 2.27
VEGFA-220ENST00000519767 IQCF3P0C7M6 154 aa29.26■■■□□ 2.27
VEGFA-220ENST00000519767 ACTN1P12814 892 aa29.26■■■□□ 2.27
VEGFA-220ENST00000519767 CELF3Q5SZQ8 465 aaKnown RBP29.26■■■□□ 2.27
VEGFA-220ENST00000519767 C7orf31Q8N865 590 aa29.26■■■□□ 2.27
VEGFA-220ENST00000519767 CAGE1Q8TC20 777 aa29.26■■■□□ 2.27
VEGFA-220ENST00000519767 SEC63Q9UGP8 760 aaKnown RBP29.26■■■□□ 2.27
VEGFA-220ENST00000519767 BAZ2BQ9UIF8 2168 aaKnown RBP29.25■■■□□ 2.27
VEGFA-220ENST00000519767 SH2B2O14492 632 aaPredicted RBP29.25■■■□□ 2.27
VEGFA-220ENST00000519767 HOXD8P13378 290 aaPredicted RBP29.25■■■□□ 2.27
VEGFA-220ENST00000519767 RNF20Q5VTR2 975 aa29.25■■■□□ 2.27
VEGFA-220ENST00000519767 PPP1R13LQ8WUF5 828 aa29.25■■■□□ 2.27
VEGFA-220ENST00000519767 PIBF1Q8WXW3 757 aa29.25■■■□□ 2.27
VEGFA-220ENST00000519767 PSEN2P49810 448 aa29.24■■■□□ 2.27
VEGFA-220ENST00000519767 GNPTABQ3T906 1256 aa29.24■■■□□ 2.27
VEGFA-220ENST00000519767 DEFB128Q7Z7B8 93 aa29.24■■■□□ 2.27
VEGFA-220ENST00000519767 IL31RAQ8NI17 732 aa29.24■■■□□ 2.27
VEGFA-220ENST00000519767 CUL5Q93034 780 aa29.24■■■□□ 2.27
VEGFA-220ENST00000519767 SPATA33Q96N06 139 aa29.24■■■□□ 2.27
VEGFA-220ENST00000519767 MYL10Q9BUA6 226 aa29.24■■■□□ 2.27
VEGFA-220ENST00000519767 SLC28A3Q9HAS3 691 aa29.24■■■□□ 2.27
VEGFA-220ENST00000519767 ZBBXA8MT70 800 aa29.23■■■□□ 2.27
VEGFA-220ENST00000519767 GGPS1O95749 300 aa29.23■■■□□ 2.27
VEGFA-220ENST00000519767 F2P00734 622 aa29.23■■■□□ 2.27
VEGFA-220ENST00000519767 GDF6Q6KF10 455 aaPredicted RBP29.23■■■□□ 2.27
VEGFA-220ENST00000519767 AFAP1L1Q8TED9 768 aa29.23■■■□□ 2.27
VEGFA-220ENST00000519767 MLXIPQ9HAP2 919 aa29.23■■■□□ 2.27
VEGFA-220ENST00000519767 GTF2IRD1Q9UHL9 959 aa29.23■■■□□ 2.27
VEGFA-220ENST00000519767 SLC12A7Q9Y666 1083 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms