RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 TAAR1Q96RJ0 339 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 R3HDMLQ9H3Y0 253 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 RNF186Q9NXI6 227 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 SAGE1Q9NXZ1 904 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 CYP39A1Q9NYL5 469 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 FBXO40Q9UH90 709 aa12□□□□□ -0.49
PABPC1-203ENST00000517921 DDX25Q9UHL0 483 aaKnown RBP12□□□□□ -0.49
PABPC1-203ENST00000517921 FAM237AA0A1B0GTK4 181 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 VWA3AA6NCI4 1184 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 ERCC3P19447 782 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 CMA1P23946 247 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 UBXN2AP68543 259 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 CALCRLQ16602 461 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 RESP18Q5W5W9 173 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 NCAPG2Q86XI2 1143 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 ANKRD13CQ8N6S4 541 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 SHCBP1Q8NEM2 672 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 LENG9Q96B70 501 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 PURBQ96QR8 312 aaKnown RBP11.99□□□□□ -0.49
PABPC1-203ENST00000517921 CSRNP2Q9H175 543 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 PXMP2Q9NR77 195 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 TMEM63CQ9P1W3 806 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 MORF4L1Q9UBU8 362 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 HPSEQ9Y251 543 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 PFASO15067 1338 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 CASP8AP2Q9UKL3 1982 aa11.99□□□□□ -0.49
PABPC1-203ENST00000517921 MYH11P35749 1972 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 IGLV3-22A0A075B6J6 115 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 FAM86B1E9PN63 330 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 FAM86B2P0C5J1 330 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 PFKFB1P16118 471 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 EIF2AK2P19525 551 aaKnown RBP11.98□□□□□ -0.49
PABPC1-203ENST00000517921 SREBF2Q12772 1141 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 FAM110CQ1W6H9 321 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 Q4G0T1 1027 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 SPECC1Q5M775 1068 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 CCDC73Q6ZRK6 1079 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 IFNL1Q8IU54 200 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 ENGASEQ8NFI3 743 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 GPRC5AQ8NFJ5 357 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 ETNPPLQ8TBG4 499 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 RMDN3Q96TC7 470 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 PDCD2LQ9BRP1 358 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 PORCNQ9H237 461 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 KCNMB3Q9NPA1 279 aa11.98□□□□□ -0.49
PABPC1-203ENST00000517921 ARID2Q68CP9 1835 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 ASTN1O14525 1302 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 A0A1B0GVL5 298 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 NR1I2O75469 434 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 BCRP11274 1271 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 NDUFA8P51970 172 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 INHBEP58166 350 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 CCNA1P78396 465 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 MRPS9P82933 396 aaKnown RBP11.97□□□□□ -0.49
PABPC1-203ENST00000517921 FAM160A1Q05DH4 1040 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 SNW1Q13573 536 aaKnown RBP11.97□□□□□ -0.49
PABPC1-203ENST00000517921 PGM5Q15124 567 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 TAF1CQ15572 869 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-203ENST00000517921 PRR16Q569H4 304 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 ARHGEF16Q5VV41 709 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 PCNX4Q63HM2 1172 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 CAVIN1Q6NZI2 390 aaKnown RBP11.97□□□□□ -0.49
PABPC1-203ENST00000517921 DTHD1Q6ZMT9 781 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 FMR1NBQ8N0W7 255 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-203ENST00000517921 ANKRD35Q8N283 1001 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 CYP2W1Q8TAV3 490 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 HAS1Q92839 578 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 ABHD8Q96I13 439 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 MROH8Q9H579 483 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 EFCC1Q9HA90 598 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 DDX19AQ9NUU7 478 aaKnown RBP11.97□□□□□ -0.49
PABPC1-203ENST00000517921 DACT1Q9NYF0 836 aa11.97□□□□□ -0.49
PABPC1-203ENST00000517921 TBX3O15119 743 aa11.96□□□□□ -0.49
PABPC1-203ENST00000517921 ZNF76P36508 570 aa11.96□□□□□ -0.49
PABPC1-203ENST00000517921 LONP1P36776 959 aaKnown RBP11.96□□□□□ -0.49
PABPC1-203ENST00000517921 TM4SF4P48230 202 aa11.96□□□□□ -0.49
PABPC1-203ENST00000517921 SETQ01105 290 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-203ENST00000517921 CEP55Q53EZ4 464 aa11.96□□□□□ -0.49
PABPC1-203ENST00000517921 USP49Q70CQ1 688 aa11.96□□□□□ -0.49
PABPC1-203ENST00000517921 NIPA1Q7RTP0 329 aa11.96□□□□□ -0.49
PABPC1-203ENST00000517921 FAM133AQ8N9E0 248 aa11.96□□□□□ -0.49
PABPC1-203ENST00000517921 NSUN6Q8TEA1 469 aaKnown RBP11.96□□□□□ -0.49
PABPC1-203ENST00000517921 SYMPKQ92797 1274 aaKnown RBP11.96□□□□□ -0.49
PABPC1-203ENST00000517921 FGD4Q96M96 766 aa11.96□□□□□ -0.49
PABPC1-203ENST00000517921 MMP19Q99542 508 aa11.96□□□□□ -0.49
PABPC1-203ENST00000517921 MXRA8Q9BRK3 442 aa11.96□□□□□ -0.49
PABPC1-203ENST00000517921 UBIAD1Q9Y5Z9 338 aa11.96□□□□□ -0.49
PABPC1-203ENST00000517921 DNAJC25-GNG10A0A024R161 153 aa11.95□□□□□ -0.5
PABPC1-203ENST00000517921 SOWAHBA6NEL2 793 aa11.95□□□□□ -0.5
PABPC1-203ENST00000517921 PP2D1A8MPX8 630 aa11.95□□□□□ -0.5
PABPC1-203ENST00000517921 MEIS1O00470 390 aa11.95□□□□□ -0.5
PABPC1-203ENST00000517921 MSH4O15457 936 aa11.95□□□□□ -0.5
PABPC1-203ENST00000517921 TBC1D8O95759 1140 aa11.95□□□□□ -0.5
PABPC1-203ENST00000517921 ITGB5P18084 799 aa11.95□□□□□ -0.5
PABPC1-203ENST00000517921 CCND2P30279 289 aa11.95□□□□□ -0.5
PABPC1-203ENST00000517921 TXKP42681 527 aa11.95□□□□□ -0.5
PABPC1-203ENST00000517921 SYKP43405 635 aa11.95□□□□□ -0.5
PABPC1-203ENST00000517921 FXR2P51116 673 aaKnown RBP eCLIP11.95□□□□□ -0.5
PABPC1-203ENST00000517921 ALDH5A1P51649 535 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-203ENST00000517921 CNTN2Q02246 1040 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms