RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 EFCAB14O75071 495 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 KDM4AO75164 1064 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 EIF3JO75822 258 aaKnown RBP8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 BAIAP3O94812 1187 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PARNO95453 639 aaKnown RBP8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 EIF2AK2P19525 551 aaKnown RBP8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 LAMC2Q13753 1193 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 IKBKEQ14164 716 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ADGRE1Q14246 886 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 LY6KQ17RY6 165 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ASPRV1Q53RT3 343 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 IFIT1BQ5T764 474 aaKnown RBP8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 EP400NLQ6ZTU2 488 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 HERC6Q8IVU3 1022 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 RGS22Q8NE09 1264 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 MORC4Q8TE76 937 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 AFAP1L1Q8TED9 768 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PPP1R13LQ8WUF5 828 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 COPS5Q92905 334 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 HLA-CQ95604 372 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 YTHDC1Q96MU7 727 aaKnown RBP8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 IWS1Q96ST2 819 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ZSCAN10Q96SZ4 725 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 CNNM2Q9H8M5 875 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 MLXIPQ9HAP2 919 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 MTUS1Q9ULD2 1270 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 COG5Q9UP83 839 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 FRMPD3Q5JV73 1810 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 RLFQ13129 1914 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 RBM47A0AV96 593 aaKnown RBP8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 RFXAPO00287 272 aa8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 SELPP16109 830 aa8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 SDSP20132 328 aa8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 VASPP50552 380 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 SART3Q15020 963 aaKnown RBP8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 FAM117BQ6P1L5 589 aa8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 KCNV1Q6PIU1 500 aa8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 LRRC8DQ7L1W4 858 aa8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 RALYLQ86SE5 291 aaKnown RBP8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 HOMER1Q86YM7 354 aa8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ADGRF4Q8IZF3 695 aa8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 CLEC4DQ8WXI8 215 aa8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 FAM122AQ96E09 287 aa8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 AMNQ9BXJ7 453 aa8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 EYSQ5T1H1 3165 aa8.57□□□□□ -1.04
TNFRSF11B-202ENST00000517352 SMCHD1A6NHR9 2005 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 CDH23Q9H251 3354 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 B4E1Z4 1266 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 SORBS3O60504 671 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 AMHP03971 560 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 MMP3P08254 477 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 FGRP09769 529 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PDIA4P13667 645 aaKnown RBP8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 TFF2Q03403 129 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 HDAC1Q13547 482 aaPredicted RBP8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 AAMPQ13685 434 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ZNF589Q86UQ0 364 aaPredicted RBP8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 SPATA33Q96N06 139 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 TAAR1Q96RJ0 339 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 MAF1Q9H063 256 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 CPVLQ9H3G5 476 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 HCN4Q9Y3Q4 1203 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PCDHA1Q9Y5I3 950 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 LTBP2Q14767 1821 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PRUNE2Q8WUY3 3088 aa8.56□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ZMYM6O95789 1325 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 COL11A1P12107 1806 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ABHD14A-ACY1A0A1B0GW23 586 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 KLRF2D3W0D1 207 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 GCOM1H8Y6P7 765 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 NR3C2P08235 984 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 POLR2MP0CAP2 368 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 GNAT1P11488 350 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 CCND2P30279 289 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 SSTR3P32745 418 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 THPOP40225 353 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PSEN2P49810 448 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 MFSD10Q14728 455 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PTPROQ16827 1216 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 KIAA0753Q2KHM9 967 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 QRICH1Q2TAL8 776 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 GNPTABQ3T906 1256 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 CNKSR3Q6P9H4 555 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 CHD1LQ86WJ1 897 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 FCHSD1Q86WN1 690 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 TBC1D10CQ8IV04 446 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 SYTL5Q8TDW5 730 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 RUFY2Q8WXA3 655 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 CUL5Q93034 780 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 RAD9AQ99638 391 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 MTCH2Q9Y6C9 303 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PLXNA1Q9UIW2 1896 aa8.55□□□□□ -1.04
TNFRSF11B-202ENST00000517352 EMSYQ7Z589 1322 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ZNFX1Q9P2E3 1918 aaKnown RBP8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 C17orf102A2RUQ5 167 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 IFIT3O14879 490 aaKnown RBP8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 FOXP2O15409 715 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 PPFIA4O75335 1185 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 ZNF286BP0CG31 522 aa8.54□□□□□ -1.04
TNFRSF11B-202ENST00000517352 SNHG28P0DPA3 235 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms