RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 SAMD3Q8N6K7 520 aa17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 EXOC6Q8TAG9 804 aa17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 AFAP1L1Q8TED9 768 aa17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 TBC1D5Q92609 795 aa17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 FTOQ9C0B1 505 aaKnown RBP eCLIP17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 TSPYL2Q9H2G4 693 aaPredicted RBP17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 PXMP2Q9NR77 195 aa17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 MAP3K20Q9NYL2 800 aaKnown RBP17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 CFBP00751 764 aa16.99■□□□□ 0.31
SCARNA20.5-201ENST00000516991 CHMP4BP1P59074 171 aa16.99■□□□□ 0.31
SCARNA20.5-201ENST00000516991 RBL2Q08999 1139 aa16.99■□□□□ 0.31
SCARNA20.5-201ENST00000516991 TRDNQ13061 729 aa16.99■□□□□ 0.31
SCARNA20.5-201ENST00000516991 VAT1LQ9HCJ6 419 aa16.99■□□□□ 0.31
SCARNA20.5-201ENST00000516991 MRVI1Q9Y6F6 885 aa16.99■□□□□ 0.31
SCARNA20.5-201ENST00000516991 TRIP12Q14669 1992 aaPredicted RBP16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 KIF28PB7ZC32 967 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 KLRF2D3W0D1 207 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 NR3C2P08235 984 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 MYOGP15173 224 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 MRPS5P82675 430 aaKnown RBP16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 LAMC2Q13753 1193 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 SEC23AQ15436 765 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 KCNV1Q6PIU1 500 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 IL27Q8NEV9 243 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 TET1Q8NFU7 2136 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 PPTC7Q8NI37 304 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 RUFY2Q8WXA3 655 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 MTMR8Q96EF0 704 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 ASB2Q96Q27 587 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 PRDM6Q9NQX0 595 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 DDX41Q9UJV9 622 aaKnown RBP16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 NCOR1O75376 2440 aa16.98■□□□□ 0.31
SCARNA20.5-201ENST00000516991 TNFRSF10AO00220 468 aa16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 ZBTB5O15062 677 aa16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 GTPBP6O43824 516 aaPredicted RBP16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 F2P00734 622 aa16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 CA3P07451 260 aa16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 SELPP16109 830 aa16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 CCDC85BQ15834 202 aaPredicted RBP16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 GDF6Q6KF10 455 aaPredicted RBP16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 HERC6Q8IVU3 1022 aa16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 STAG2Q8N3U4 1231 aa16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 PPP1R13LQ8WUF5 828 aa16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 KAT2BQ92831 832 aa16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 PDCD2LQ9BRP1 358 aa16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 GTF2IRD1Q9UHL9 959 aa16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
SCARNA20.5-201ENST00000516991 SPTBN5Q9NRC6 3674 aaKnown RBP16.96■□□□□ 0.31
SCARNA20.5-201ENST00000516991 ERICH2A1L162 156 aa16.96■□□□□ 0.31
SCARNA20.5-201ENST00000516991 PALM3A6NDB9 673 aaPredicted RBP16.96■□□□□ 0.31
SCARNA20.5-201ENST00000516991 OPLAHO14841 1288 aa16.96■□□□□ 0.31
SCARNA20.5-201ENST00000516991 KCNJ6P48051 423 aa16.96■□□□□ 0.31
SCARNA20.5-201ENST00000516991 PSEN2P49810 448 aa16.96■□□□□ 0.31
SCARNA20.5-201ENST00000516991 TTC22Q5TAA0 569 aa16.96■□□□□ 0.31
SCARNA20.5-201ENST00000516991 LRRC8DQ7L1W4 858 aa16.96■□□□□ 0.31
SCARNA20.5-201ENST00000516991 DHX37Q8IY37 1157 aaKnown RBP16.96■□□□□ 0.31
SCARNA20.5-201ENST00000516991 C7orf31Q8N865 590 aa16.96■□□□□ 0.31
SCARNA20.5-201ENST00000516991 MAD2L2Q9UI95 211 aa16.96■□□□□ 0.31
SCARNA20.5-201ENST00000516991 PCDHA1Q9Y5I3 950 aa16.96■□□□□ 0.31
SCARNA20.5-201ENST00000516991 MYH7BA7E2Y1 1941 aa16.96■□□□□ 0.3
SCARNA20.5-201ENST00000516991 HOXD8P13378 290 aaPredicted RBP16.95■□□□□ 0.3
SCARNA20.5-201ENST00000516991 POU3F3P20264 500 aaPredicted RBP16.95■□□□□ 0.3
SCARNA20.5-201ENST00000516991 MFSD10Q14728 455 aa16.95■□□□□ 0.3
SCARNA20.5-201ENST00000516991 GRM4Q14833 912 aa16.95■□□□□ 0.3
SCARNA20.5-201ENST00000516991 SART3Q15020 963 aaKnown RBP16.95■□□□□ 0.3
SCARNA20.5-201ENST00000516991 CNKSR3Q6P9H4 555 aa16.95■□□□□ 0.3
SCARNA20.5-201ENST00000516991 STOX1Q6ZVD7 989 aa16.95■□□□□ 0.3
SCARNA20.5-201ENST00000516991 CYB5R4Q7L1T6 521 aa16.95■□□□□ 0.3
SCARNA20.5-201ENST00000516991 RALYLQ86SE5 291 aaKnown RBP16.95■□□□□ 0.3
SCARNA20.5-201ENST00000516991 CTAGE1Q96RT6 745 aa16.95■□□□□ 0.3
SCARNA20.5-201ENST00000516991 IL25Q9H293 177 aa16.95■□□□□ 0.3
SCARNA20.5-201ENST00000516991 HAS3O00219 553 aa16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 PPP1R11O60927 126 aaPredicted RBP16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 EFCAB14O75071 495 aa16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 TGFB3P10600 412 aa16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 GSPT1P15170 499 aaKnown RBP16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 CCND2P30279 289 aa16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 PTK7Q13308 1070 aa16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 AAK1Q2M2I8 961 aa16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 MICALL1Q8N3F8 863 aa16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 DHX38Q92620 1227 aaKnown RBP16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 HDAC6Q9UBN7 1215 aa16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 TRANK1O15050 2925 aa16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 PRRC2BQ5JSZ5 2229 aaKnown RBP16.94■□□□□ 0.3
SCARNA20.5-201ENST00000516991 GCOM1H8Y6P7 765 aaPredicted RBP16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 IFIT3O14879 490 aaKnown RBP16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 TLL1O43897 1013 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 CXCL10P02778 98 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 POLR2MP0CAP2 368 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 ZNF286BP0CG31 522 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 CKBP12277 381 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 MYCLP12524 364 aaPredicted RBP16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 WDR5P61964 334 aaKnown RBP16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 TAP1Q03518 808 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 PGM5Q15124 567 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 KIAA0753Q2KHM9 967 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 CELF3Q5SZQ8 465 aaKnown RBP16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 VSIG10LQ86VR7 867 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms