RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 CYBAP13498 195 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 ATP2B1P20020 1258 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 CNGA1P29973 690 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 CCND2P30279 289 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 ADCYAP1R1P41586 468 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
HTT-213ENST00000513806 ACVR2BQ13705 512 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 NBR1Q14596 966 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 SAMD3Q8N6K7 520 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 BICD2Q8TD16 824 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 MORC4Q8TE76 937 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 PXYLP1Q8TE99 480 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 TBCKQ8TEA7 893 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 COPS5Q92905 334 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 BCAS3Q9H6U6 928 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
HTT-213ENST00000513806 PKD2L1Q9P0L9 805 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 BRCA2P51587 3418 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 TCHHQ07283 1943 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 WDR81Q562E7 1941 aa12.94□□□□□ -0.34
HTT-213ENST00000513806 SYNGAP1Q96PV0 1343 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 CCDC194A0A1B0GVG4 234 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 TDP2O95551 362 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 SREBF1P36956 1147 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 ARHGAP4P98171 946 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 SEMA3FQ13275 785 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 AP3B2Q13367 1082 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 TAPT1Q6NXT6 567 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 VSIG10LQ86VR7 867 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 GJA10Q969M2 543 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 WDR11Q9BZH6 1224 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 GLT8D2Q9H1C3 349 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 MTMR6Q9Y217 621 aa12.93□□□□□ -0.34
HTT-213ENST00000513806 FAM86B1E9PN63 330 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 FOSP01100 380 aaPredicted RBP12.92□□□□□ -0.34
HTT-213ENST00000513806 FAM86B2P0C5J1 330 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 CCL5P13501 91 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 GNL2Q13823 731 aaKnown RBP12.92□□□□□ -0.34
HTT-213ENST00000513806 NONOQ15233 471 aaKnown RBP eCLIP12.92□□□□□ -0.34
HTT-213ENST00000513806 SAFBQ15424 915 aaKnown RBP eCLIP12.92□□□□□ -0.34
HTT-213ENST00000513806 STXBP2Q15833 593 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 PKN2Q16513 984 aaKnown RBP12.92□□□□□ -0.34
HTT-213ENST00000513806 LY6KQ17RY6 165 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 LETM2Q2VYF4 491 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 CCDC144BQ3MJ40 725 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 MAP3K21Q5TCX8 1036 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 PCNX4Q63HM2 1172 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 GALNT17Q6IS24 598 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 FAM173BQ6P4H8 233 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 KRT25Q7Z3Z0 450 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 CRYGNQ8WXF5 182 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 IWS1Q96ST2 819 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 BRMS1Q9HCU9 246 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 KIF3AQ9Y496 699 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 TELO2Q9Y4R8 837 aa12.92□□□□□ -0.34
HTT-213ENST00000513806 KIAA0100Q14667 2235 aaKnown RBP12.91□□□□□ -0.34
HTT-213ENST00000513806 STX6O43752 255 aa12.91□□□□□ -0.34
HTT-213ENST00000513806 ARP10275 920 aa12.91□□□□□ -0.34
HTT-213ENST00000513806 SMPD1P17405 629 aa12.91□□□□□ -0.34
HTT-213ENST00000513806 ITGB5P18084 799 aa12.91□□□□□ -0.34
HTT-213ENST00000513806 ZNF76P36508 570 aa12.91□□□□□ -0.34
HTT-213ENST00000513806 SP2Q02086 613 aa12.91□□□□□ -0.34
HTT-213ENST00000513806 FOXD4L6Q3SYB3 417 aaPredicted RBP12.91□□□□□ -0.34
HTT-213ENST00000513806 FOXD4L3Q6VB84 417 aaPredicted RBP12.91□□□□□ -0.34
HTT-213ENST00000513806 TRMT44Q8IYL2 757 aaKnown RBP12.91□□□□□ -0.34
HTT-213ENST00000513806 MSL3Q8N5Y2 521 aaKnown RBP12.91□□□□□ -0.34
HTT-213ENST00000513806 ZNF333Q96JL9 665 aa12.91□□□□□ -0.34
HTT-213ENST00000513806 MAF1Q9H063 256 aa12.91□□□□□ -0.34
HTT-213ENST00000513806 ABHD16BQ9H3Z7 469 aa12.91□□□□□ -0.34
HTT-213ENST00000513806 EHMT1Q9H9B1 1298 aa12.91□□□□□ -0.34
HTT-213ENST00000513806 CNPY2Q9Y2B0 182 aa12.91□□□□□ -0.34
HTT-213ENST00000513806 UBIAD1Q9Y5Z9 338 aa12.91□□□□□ -0.34
HTT-213ENST00000513806 POTEFA5A3E0 1075 aa12.9□□□□□ -0.34
HTT-213ENST00000513806 SLC37A4O43826 429 aa12.9□□□□□ -0.34
HTT-213ENST00000513806 ATP9AO75110 1047 aa12.9□□□□□ -0.34
HTT-213ENST00000513806 EIF3JO75822 258 aaKnown RBP12.9□□□□□ -0.34
HTT-213ENST00000513806 TOB1P50616 345 aaPredicted RBP12.9□□□□□ -0.34
HTT-213ENST00000513806 RESTQ13127 1097 aa12.9□□□□□ -0.34
HTT-213ENST00000513806 NOSTRINQ8IVI9 506 aa12.9□□□□□ -0.34
HTT-213ENST00000513806 ARMC5Q96C12 935 aa12.9□□□□□ -0.34
HTT-213ENST00000513806 CHAMP1Q96JM3 812 aa12.9□□□□□ -0.34
HTT-213ENST00000513806 MXRA8Q9BRK3 442 aa12.9□□□□□ -0.34
HTT-213ENST00000513806 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.9□□□□□ -0.34
HTT-213ENST00000513806 RNF208Q9H0X6 261 aa12.9□□□□□ -0.34
HTT-213ENST00000513806 FOXP1Q9H334 677 aaPredicted RBP12.9□□□□□ -0.34
HTT-213ENST00000513806 HMX1Q9NP08 348 aaPredicted RBP12.9□□□□□ -0.34
HTT-213ENST00000513806 VTA1Q9NP79 307 aa12.9□□□□□ -0.34
HTT-213ENST00000513806 IGLV3-22A0A075B6J6 115 aa12.89□□□□□ -0.35
HTT-213ENST00000513806 MYADML2A6NDP7 307 aa12.89□□□□□ -0.35
HTT-213ENST00000513806 CCNT1O60563 726 aaKnown RBP12.89□□□□□ -0.35
HTT-213ENST00000513806 MYCNP04198 464 aaPredicted RBP12.89□□□□□ -0.35
HTT-213ENST00000513806 CYP3A4P08684 503 aa12.89□□□□□ -0.35
HTT-213ENST00000513806 U2AF2P26368 475 aaKnown RBP eCLIP12.89□□□□□ -0.35
HTT-213ENST00000513806 TNFAIP2Q03169 654 aa12.89□□□□□ -0.35
HTT-213ENST00000513806 ZNF174Q15697 407 aa12.89□□□□□ -0.35
HTT-213ENST00000513806 PRR16Q569H4 304 aa12.89□□□□□ -0.35
HTT-213ENST00000513806 NEK8Q86SG6 692 aa12.89□□□□□ -0.35
HTT-213ENST00000513806 PLA2G4DQ86XP0 818 aa12.89□□□□□ -0.35
HTT-213ENST00000513806 FAM177A1Q8N128 213 aaPredicted RBP12.89□□□□□ -0.35
HTT-213ENST00000513806 LENG9Q96B70 501 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms