RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 KIAA0100Q14667 2235 aaKnown RBP8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 SPDYE3A6NKU9 549 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 B4DLN1 442 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 COBLO75128 1261 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 FOSP01100 380 aaPredicted RBP8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 PGK2P07205 417 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 XRCC5P13010 732 aaKnown RBP8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 PDCP20941 246 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 HOXA13P31271 388 aaPredicted RBP8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 CLK2P49760 499 aaKnown RBP8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 ZNF792Q3KQV3 632 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 KRT40Q6A162 431 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 MCTP2Q6DN12 878 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 USP17L6PQ6QN14 398 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 TRMT44Q8IYL2 757 aaKnown RBP8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 SYTL5Q8TDW5 730 aaPredicted RBP8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 TBC1D5Q92609 795 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 SHISA4Q96DD7 197 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 MAML3Q96JK9 1138 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 MPHOSPH6Q99547 160 aaKnown RBP8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 EHMT1Q9H9B1 1298 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 BRMS1Q9HCU9 246 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 PCDHA4Q9UN74 947 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 LOXHD1Q8IVV2 1947 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 FRMPD4Q14CM0 1322 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 HTTP42858 3142 aa8.69□□□□□ -1.02
HMGXB3-204ENST00000513318 POTEB3A0JP26 581 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 ASB14A6NK59 587 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 MMP1P03956 469 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 CYP2B6P20813 491 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 KRT2P35908 639 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 ALDH5A1P51649 535 aaPredicted RBP8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 FOSBP53539 338 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 CNTN2Q02246 1040 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 SAFBQ15424 915 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 NPY5RQ15761 445 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 PKN2Q16513 984 aaKnown RBP8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 UBE2SQ16763 222 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 OLFML2BQ68BL8 750 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 POTEBQ6S5H4 581 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 FCHSD1Q86WN1 690 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 BLIDQ8IZY5 108 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 MSL3Q8N5Y2 521 aaKnown RBP8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 FBXO18Q8NFZ0 1043 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 NPLOC4Q8TAT6 608 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 RAET1EQ8TD07 263 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 PXYLP1Q8TE99 480 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 FGD4Q96M96 766 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 PXMP2Q9NR77 195 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 GJB4Q9NTQ9 266 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 COL20A1Q9P218 1284 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 KCNJ14Q9UNX9 436 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 PTPN22Q9Y2R2 807 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 ASTN1O14525 1302 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 CENPFP49454 3210 aa8.68□□□□□ -1.02
HMGXB3-204ENST00000513318 SOWAHBA6NEL2 793 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 H3BQV1 296 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 M0R2N6 131 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 ADCY3O60266 1144 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 HMGCRP04035 888 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 PDIA4P13667 645 aaKnown RBP8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 EDNRBP24530 442 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 IFFO2Q5TF58 517 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 ARHGEF16Q5VV41 709 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 LARP1BQ659C4 914 aaKnown RBP8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 FBXO46Q6PJ61 603 aaPredicted RBP8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 MAMDC4Q6UXC1 1216 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 DIS3L2Q8IYB7 885 aaKnown RBP8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 RPTORQ8N122 1335 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 NSUN6Q8TEA1 469 aaKnown RBP8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 TRIB2Q92519 343 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 SYNGAP1Q96PV0 1343 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 PURBQ96QR8 312 aaKnown RBP8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 TAAR1Q96RJ0 339 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 IWS1Q96ST2 819 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 RMDN3Q96TC7 470 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 ANO3Q9BYT9 981 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 BIN2Q9UBW5 565 aaPredicted RBP8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 PCDHA6Q9UN73 950 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 RBM19Q9Y4C8 960 aaKnown RBP8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 PCDHA8Q9Y5H6 950 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 PTCH2Q9Y6C5 1203 aa8.67□□□□□ -1.02
HMGXB3-204ENST00000513318 FAM205CA6NFA0 338 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 EIF2AK2P19525 551 aaKnown RBP8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 GRK4P32298 578 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 SREBF1P36956 1147 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 GUCY1B3Q02153 619 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 GNL2Q13823 731 aaKnown RBP8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 PGM5Q15124 567 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 CCL14Q16627 93 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 JAKMIP3Q5VZ66 844 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 MFSD14CQ5VZR4 134 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 PCNX4Q63HM2 1172 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 XRRA1Q6P2D8 792 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 ARMCX2Q7L311 632 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 KRT25Q7Z3Z0 450 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 RASGRP4Q8TDF6 673 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 MORC4Q8TE76 937 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 PDCD2LQ9BRP1 358 aa8.66□□□□□ -1.02
HMGXB3-204ENST00000513318 TINF2Q9BSI4 451 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms