RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-231ENST00000513098 CXXC1Q9P0U4 656 aaPredicted RBP14.58□□□□□ -0.08
UBE2D3-231ENST00000513098 TAF6LQ9Y6J9 622 aa14.58□□□□□ -0.08
UBE2D3-231ENST00000513098 SPTBN5Q9NRC6 3674 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 MMP3P08254 477 aa14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 CYP2C9P11712 490 aa14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 HOXD8P13378 290 aaPredicted RBP14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 CASTP20810 708 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 RFC2P35250 354 aa14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 ANTXR2P58335 489 aa14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 IRX6P78412 446 aaPredicted RBP14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 LAMC2Q13753 1193 aa14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 MB21D2Q8IYB1 491 aaPredicted RBP14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 TMTC2Q8N394 836 aa14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 MYLIPQ8WY64 445 aa14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 KAT2BQ92831 832 aa14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 PDCD2LQ9BRP1 358 aa14.57□□□□□ -0.08
UBE2D3-231ENST00000513098 GRXCR1A8MXD5 290 aa14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 PPFIA4O75335 1185 aa14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 RGS20O76081 388 aa14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 EIF2AK2P19525 551 aaKnown RBP14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 RAB30Q15771 203 aa14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 DGKDQ16760 1214 aa14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 TMEM67Q5HYA8 995 aa14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 OTOP2Q7RTS6 562 aa14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 CATIPQ7Z7H3 387 aa14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 MAFAQ8NHW3 353 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 PPTC7Q8NI37 304 aa14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 PIGSQ96S52 555 aa14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 RBM8AQ9Y5S9 174 aaKnown RBP14.56□□□□□ -0.08
UBE2D3-231ENST00000513098 TRANK1O15050 2925 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 GCOM1H8Y6P7 765 aaPredicted RBP14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 IQCF3P0C7M6 154 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 POLR2MP0CAP2 368 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 FOSL2P15408 326 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 PBX2P40425 430 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 BFSP2Q13515 415 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 PGM5Q15124 567 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 MYSM1Q5VVJ2 828 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 SCLYQ96I15 445 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 CTAGE1Q96RT6 745 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 LZTS2Q9BRK4 669 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 SPZ1Q9BXG8 430 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 LSG1Q9H089 658 aaKnown RBP14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 LY9Q9HBG7 655 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 MSRAQ9UJ68 235 aa14.55□□□□□ -0.08
UBE2D3-231ENST00000513098 HAS3O00219 553 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 STAM2O75886 525 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 DDAH1O94760 285 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 LIFRP42702 1097 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 RBL2Q08999 1139 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 NECTIN1Q15223 517 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 FAM47CQ5HY64 1035 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 CHST3Q7LGC8 479 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 RETREG2Q8NC44 543 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 CAGE1Q8TC20 777 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 MRVI1Q9Y6F6 885 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 SLC4A7Q9Y6M7 1214 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 FRMPD4Q14CM0 1322 aa14.54□□□□□ -0.08
UBE2D3-231ENST00000513098 TRIP12Q14669 1992 aaPredicted RBP14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 MYH7BA7E2Y1 1941 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 PARNO95453 639 aaKnown RBP14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 F2P00734 622 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 HOXA13P31271 388 aaPredicted RBP14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 ICAM3P32942 547 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 KIF5BP33176 963 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 MCM5P33992 734 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 PTGISQ16647 500 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 CELF3Q5SZQ8 465 aaKnown RBP14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 HOMER1Q86YM7 354 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 DHX37Q8IY37 1157 aaKnown RBP14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 PHOSPHO2Q8TCD6 241 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 AFAP1L1Q8TED9 768 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 TMEM87BQ96K49 555 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 ESYT1Q9BSJ8 1104 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 KATNAL1Q9BW62 490 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 GTF2IRD1Q9UHL9 959 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 PCDHA11Q9Y5I1 949 aa14.53□□□□□ -0.08
UBE2D3-231ENST00000513098 TTC28Q96AY4 2481 aa14.52□□□□□ -0.08
UBE2D3-231ENST00000513098 MUC3AQ02505 3323 aa14.52□□□□□ -0.08
UBE2D3-231ENST00000513098 PIK3CDO00329 1044 aa14.52□□□□□ -0.09
UBE2D3-231ENST00000513098 MYCLP12524 364 aaPredicted RBP14.52□□□□□ -0.09
UBE2D3-231ENST00000513098 ACTN1P12814 892 aa14.52□□□□□ -0.09
UBE2D3-231ENST00000513098 CCND2P30279 289 aa14.52□□□□□ -0.09
UBE2D3-231ENST00000513098 GNAQP50148 359 aa14.52□□□□□ -0.09
UBE2D3-231ENST00000513098 SP2Q02086 613 aa14.52□□□□□ -0.09
UBE2D3-231ENST00000513098 GDF6Q6KF10 455 aaPredicted RBP14.52□□□□□ -0.09
UBE2D3-231ENST00000513098 CASC1Q6TDU7 716 aa14.52□□□□□ -0.09
UBE2D3-231ENST00000513098 ZNF654Q8IZM8 581 aa14.52□□□□□ -0.09
UBE2D3-231ENST00000513098 CCDC155Q8N6L0 562 aa14.52□□□□□ -0.09
UBE2D3-231ENST00000513098 TET1Q8NFU7 2136 aa14.52□□□□□ -0.09
UBE2D3-231ENST00000513098 SH2B2O14492 632 aaPredicted RBP14.51□□□□□ -0.09
UBE2D3-231ENST00000513098 SLC27A2O14975 620 aa14.51□□□□□ -0.09
UBE2D3-231ENST00000513098 PRC1O43663 620 aa14.51□□□□□ -0.09
UBE2D3-231ENST00000513098 CALM1P0DP23 149 aa14.51□□□□□ -0.09
UBE2D3-231ENST00000513098 CALM2P0DP24 149 aa14.51□□□□□ -0.09
UBE2D3-231ENST00000513098 CALM3P0DP25 149 aa14.51□□□□□ -0.09
UBE2D3-231ENST00000513098 ATP2A2P16615 1042 aaKnown RBP14.51□□□□□ -0.09
UBE2D3-231ENST00000513098 PSEN2P49810 448 aa14.51□□□□□ -0.09
UBE2D3-231ENST00000513098 GPNMBQ14956 572 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms