RNA–Protein interactions for RNA: ENST00000511665.1

HMCES-208, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

TSL 5

Gene HMCES, Length 643 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-208ENST00000511665 NFRKBQ6P4R8 1299 aa27.88■■■□□ 2.05
HMCES-208ENST00000511665 FCHSD1Q86WN1 690 aa27.88■■■□□ 2.05
HMCES-208ENST00000511665 BAZ2BQ9UIF8 2168 aaKnown RBP27.88■■■□□ 2.05
HMCES-208ENST00000511665 MRVI1Q9Y6F6 885 aa27.88■■■□□ 2.05
HMCES-208ENST00000511665 SH2B2O14492 632 aaPredicted RBP27.87■■■□□ 2.05
HMCES-208ENST00000511665 FGBP02675 491 aa27.87■■■□□ 2.05
HMCES-208ENST00000511665 CYP2C9P11712 490 aa27.87■■■□□ 2.05
HMCES-208ENST00000511665 CASTP20810 708 aaKnown RBP27.87■■■□□ 2.05
HMCES-208ENST00000511665 SMARCA1P28370 1054 aa27.87■■■□□ 2.05
HMCES-208ENST00000511665 CHMP4BP1P59074 171 aa27.87■■■□□ 2.05
HMCES-208ENST00000511665 VSIG10LQ86VR7 867 aa27.87■■■□□ 2.05
HMCES-208ENST00000511665 PPP1R13LQ8WUF5 828 aa27.87■■■□□ 2.05
HMCES-208ENST00000511665 COL6A3P12111 3177 aa27.87■■■□□ 2.05
HMCES-208ENST00000511665 MMP3P08254 477 aa27.86■■■□□ 2.05
HMCES-208ENST00000511665 LIFRP42702 1097 aa27.86■■■□□ 2.05
HMCES-208ENST00000511665 PTPN11Q06124 597 aaPredicted RBP27.86■■■□□ 2.05
HMCES-208ENST00000511665 PGM5Q15124 567 aa27.86■■■□□ 2.05
HMCES-208ENST00000511665 RPUSD2Q8IZ73 545 aaKnown RBP27.86■■■□□ 2.05
HMCES-208ENST00000511665 RRP36Q96EU6 259 aaKnown RBP27.86■■■□□ 2.05
HMCES-208ENST00000511665 LZTS2Q9BRK4 669 aa27.86■■■□□ 2.05
HMCES-208ENST00000511665 SPZ1Q9BXG8 430 aa27.86■■■□□ 2.05
HMCES-208ENST00000511665 GNAQP50148 359 aa27.85■■■□□ 2.05
HMCES-208ENST00000511665 LAMC2Q13753 1193 aa27.85■■■□□ 2.05
HMCES-208ENST00000511665 COL9A3Q14050 684 aaPredicted RBP27.85■■■□□ 2.05
HMCES-208ENST00000511665 RASIP1Q5U651 963 aa27.85■■■□□ 2.05
HMCES-208ENST00000511665 RNF20Q5VTR2 975 aa27.85■■■□□ 2.05
HMCES-208ENST00000511665 KCNV1Q6PIU1 500 aa27.85■■■□□ 2.05
HMCES-208ENST00000511665 DHX37Q8IY37 1157 aaKnown RBP27.85■■■□□ 2.05
HMCES-208ENST00000511665 WNT8AQ9H1J5 351 aa27.85■■■□□ 2.05
HMCES-208ENST00000511665 TTYH1Q9H313 450 aaPredicted RBP27.85■■■□□ 2.05
HMCES-208ENST00000511665 RGS20O76081 388 aa27.84■■■□□ 2.05
HMCES-208ENST00000511665 CALM1P0DP23 149 aa27.84■■■□□ 2.05
HMCES-208ENST00000511665 CALM2P0DP24 149 aa27.84■■■□□ 2.05
HMCES-208ENST00000511665 CALM3P0DP25 149 aa27.84■■■□□ 2.05
HMCES-208ENST00000511665 CCND2P30279 289 aa27.84■■■□□ 2.05
HMCES-208ENST00000511665 DGKDQ16760 1214 aa27.84■■■□□ 2.05
HMCES-208ENST00000511665 HERVK_113Q902F9 699 aa27.84■■■□□ 2.05
HMCES-208ENST00000511665 EMID1Q96A84 441 aaPredicted RBP27.84■■■□□ 2.05
HMCES-208ENST00000511665 SCLYQ96I15 445 aa27.84■■■□□ 2.05
HMCES-208ENST00000511665 CDX2Q99626 313 aaPredicted RBP27.84■■■□□ 2.05
HMCES-208ENST00000511665 SRBD1Q8N5C6 995 aaKnown RBP27.83■■■□□ 2.05
HMCES-208ENST00000511665 ZFP91Q96JP5 570 aaPredicted RBP27.83■■■□□ 2.05
HMCES-208ENST00000511665 LRRC2Q9BYS8 371 aa27.83■■■□□ 2.05
HMCES-208ENST00000511665 SEC63Q9UGP8 760 aaKnown RBP27.83■■■□□ 2.05
HMCES-208ENST00000511665 SLC12A7Q9Y666 1083 aa27.83■■■□□ 2.05
HMCES-208ENST00000511665 TMEM265A0A087WTH1 108 aa27.82■■■□□ 2.04
HMCES-208ENST00000511665 IL31RAQ8NI17 732 aa27.82■■■□□ 2.04
HMCES-208ENST00000511665 MTIF3Q9H2K0 278 aaKnown RBP27.82■■■□□ 2.04
HMCES-208ENST00000511665 NOD1Q9Y239 953 aa27.82■■■□□ 2.04
HMCES-208ENST00000511665 CDC45O75419 566 aa27.81■■■□□ 2.04
HMCES-208ENST00000511665 PLEKHA8P1O95397 391 aa27.81■■■□□ 2.04
HMCES-208ENST00000511665 TGFB3P10600 412 aa27.81■■■□□ 2.04
HMCES-208ENST00000511665 RXRAP19793 462 aa27.81■■■□□ 2.04
HMCES-208ENST00000511665 DNAJB2P25686 324 aa27.81■■■□□ 2.04
HMCES-208ENST00000511665 OTOP2Q7RTS6 562 aa27.81■■■□□ 2.04
HMCES-208ENST00000511665 CMTR1Q8N1G2 835 aaKnown RBP27.81■■■□□ 2.04
HMCES-208ENST00000511665 RETREG2Q8NC44 543 aa27.81■■■□□ 2.04
HMCES-208ENST00000511665 KAT2BQ92831 832 aa27.81■■■□□ 2.04
HMCES-208ENST00000511665 SCN10AQ9Y5Y9 1956 aa27.8■■■□□ 2.04
HMCES-208ENST00000511665 GRXCR1A8MXD5 290 aa27.8■■■□□ 2.04
HMCES-208ENST00000511665 MYSM1Q5VVJ2 828 aa27.8■■■□□ 2.04
HMCES-208ENST00000511665 PPTC7Q8NI37 304 aa27.8■■■□□ 2.04
HMCES-208ENST00000511665 CUL5Q93034 780 aa27.8■■■□□ 2.04
HMCES-208ENST00000511665 CCDC136Q96JN2 1154 aa27.8■■■□□ 2.04
HMCES-208ENST00000511665 NEK1Q96PY6 1258 aa27.8■■■□□ 2.04
HMCES-208ENST00000511665 KIAA1217Q5T5P2 1943 aa27.8■■■□□ 2.04
HMCES-208ENST00000511665 PTGISQ16647 500 aa27.79■■■□□ 2.04
HMCES-208ENST00000511665 CELF3Q5SZQ8 465 aaKnown RBP27.79■■■□□ 2.04
HMCES-208ENST00000511665 SYNE3Q6ZMZ3 975 aa27.79■■■□□ 2.04
HMCES-208ENST00000511665 RAB11FIP4Q86YS3 637 aa27.79■■■□□ 2.04
HMCES-208ENST00000511665 FANCBQ8NB91 859 aa27.79■■■□□ 2.04
HMCES-208ENST00000511665 SMARCC2Q8TAQ2 1214 aa27.79■■■□□ 2.04
HMCES-208ENST00000511665 TIFAQ96CG3 184 aa27.79■■■□□ 2.04
HMCES-208ENST00000511665 CXXC1Q9P0U4 656 aaPredicted RBP27.79■■■□□ 2.04
HMCES-208ENST00000511665 SORBS3O60504 671 aa27.78■■■□□ 2.04
HMCES-208ENST00000511665 GGPS1O95749 300 aa27.78■■■□□ 2.04
HMCES-208ENST00000511665 SP2Q02086 613 aa27.78■■■□□ 2.04
HMCES-208ENST00000511665 BFSP2Q13515 415 aa27.78■■■□□ 2.04
HMCES-208ENST00000511665 CCDC82Q8N4S0 544 aa27.78■■■□□ 2.04
HMCES-208ENST00000511665 SPATA33Q96N06 139 aa27.78■■■□□ 2.04
HMCES-208ENST00000511665 MLXIPQ9HAP2 919 aa27.78■■■□□ 2.04
HMCES-208ENST00000511665 PPFIA4O75335 1185 aa27.77■■■□□ 2.04
HMCES-208ENST00000511665 PSEN2P49810 448 aa27.77■■■□□ 2.04
HMCES-208ENST00000511665 USP17L6PQ6QN14 398 aa27.77■■■□□ 2.04
HMCES-208ENST00000511665 DEFB128Q7Z7B8 93 aa27.77■■■□□ 2.04
HMCES-208ENST00000511665 SESTD1Q86VW0 696 aa27.77■■■□□ 2.04
HMCES-208ENST00000511665 SGMS1Q86VZ5 419 aa27.77■■■□□ 2.04
HMCES-208ENST00000511665 MYLIPQ8WY64 445 aa27.77■■■□□ 2.04
HMCES-208ENST00000511665 GPKOWQ92917 476 aaPredicted RBP eCLIP27.77■■■□□ 2.04
HMCES-208ENST00000511665 ALG1Q9BT22 464 aa27.77■■■□□ 2.04
HMCES-208ENST00000511665 KATNAL1Q9BW62 490 aa27.77■■■□□ 2.04
HMCES-208ENST00000511665 PBX4Q9BYU1 374 aa27.77■■■□□ 2.04
HMCES-208ENST00000511665 PITPNM1O00562 1244 aa27.76■■■□□ 2.03
HMCES-208ENST00000511665 STAM2O75886 525 aa27.76■■■□□ 2.03
HMCES-208ENST00000511665 PFKMP08237 780 aa27.76■■■□□ 2.03
HMCES-208ENST00000511665 PBX2P40425 430 aa27.76■■■□□ 2.03
HMCES-208ENST00000511665 MRPS9P82933 396 aaKnown RBP27.76■■■□□ 2.03
HMCES-208ENST00000511665 HSDL1Q3SXM5 330 aa27.76■■■□□ 2.03
HMCES-208ENST00000511665 TSGA10IPQ3SY00 556 aa27.76■■■□□ 2.03
HMCES-208ENST00000511665 GNPTABQ3T906 1256 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms