RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 ZNF236Q9UL36 1845 aa16.89■□□□□ 0.29
RNF4-213ENST00000509388 MGAMO43451 1857 aa16.89■□□□□ 0.29
RNF4-213ENST00000509388 ATP2B1P20020 1258 aa16.89■□□□□ 0.29
RNF4-213ENST00000509388 CNGA1P29973 690 aa16.89■□□□□ 0.29
RNF4-213ENST00000509388 LETM2Q2VYF4 491 aa16.89■□□□□ 0.29
RNF4-213ENST00000509388 PRAMEF19Q5SWL8 479 aa16.89■□□□□ 0.29
RNF4-213ENST00000509388 SEPT14Q6ZU15 432 aa16.89■□□□□ 0.29
RNF4-213ENST00000509388 NEK8Q86SG6 692 aa16.89■□□□□ 0.29
RNF4-213ENST00000509388 FBXO16Q8IX29 292 aaPredicted RBP16.89■□□□□ 0.29
RNF4-213ENST00000509388 IL31RAQ8NI17 732 aa16.89■□□□□ 0.29
RNF4-213ENST00000509388 NAP1L4Q99733 375 aaKnown RBP16.89■□□□□ 0.29
RNF4-213ENST00000509388 CYP3A4P08684 503 aa16.88■□□□□ 0.29
RNF4-213ENST00000509388 U2AF2P26368 475 aaKnown RBP eCLIP16.88■□□□□ 0.296e-8■□□□□ 9.9
RNF4-213ENST00000509388 CACNB2Q08289 660 aaPredicted RBP16.88■□□□□ 0.29
RNF4-213ENST00000509388 TRIM32Q13049 653 aa16.88■□□□□ 0.29
RNF4-213ENST00000509388 FERMT3Q86UX7 667 aa16.88■□□□□ 0.29
RNF4-213ENST00000509388 TNFRSF25Q93038 417 aa16.88■□□□□ 0.29
RNF4-213ENST00000509388 CDHR1Q96JP9 859 aa16.88■□□□□ 0.29
RNF4-213ENST00000509388 MCOLN1Q9GZU1 580 aa16.88■□□□□ 0.29
RNF4-213ENST00000509388 HMX1Q9NP08 348 aaPredicted RBP16.88■□□□□ 0.29
RNF4-213ENST00000509388 MTMR6Q9Y217 621 aa16.88■□□□□ 0.29
RNF4-213ENST00000509388 MRVI1Q9Y6F6 885 aa16.88■□□□□ 0.29
RNF4-213ENST00000509388 KIF28PB7ZC32 967 aa16.87■□□□□ 0.29
RNF4-213ENST00000509388 MRPS9P82933 396 aaKnown RBP16.87■□□□□ 0.29
RNF4-213ENST00000509388 TTLL4Q14679 1199 aa16.87■□□□□ 0.29
RNF4-213ENST00000509388 CEP55Q53EZ4 464 aa16.87■□□□□ 0.29
RNF4-213ENST00000509388 EARS2Q5JPH6 523 aaKnown RBP16.87■□□□□ 0.29
RNF4-213ENST00000509388 KCNV1Q6PIU1 500 aa16.87■□□□□ 0.29
RNF4-213ENST00000509388 BRAPQ7Z569 592 aa16.87■□□□□ 0.29
RNF4-213ENST00000509388 IPO9Q96P70 1041 aaKnown RBP16.87■□□□□ 0.29
RNF4-213ENST00000509388 MXRA8Q9BRK3 442 aa16.87■□□□□ 0.29
RNF4-213ENST00000509388 ZSCAN16Q9H4T2 348 aaPredicted RBP16.87■□□□□ 0.29
RNF4-213ENST00000509388 FAM184BQ9ULE4 1060 aa16.87■□□□□ 0.29
RNF4-213ENST00000509388 FAM205CA6NFA0 338 aa16.86■□□□□ 0.29
RNF4-213ENST00000509388 MARCH6O60337 910 aa16.86■□□□□ 0.29
RNF4-213ENST00000509388 CCNT1O60563 726 aaKnown RBP16.86■□□□□ 0.29
RNF4-213ENST00000509388 MYCP01106 439 aaPredicted RBP16.86■□□□□ 0.29
RNF4-213ENST00000509388 IGHA2P01877 340 aa16.86■□□□□ 0.29
RNF4-213ENST00000509388 ZNF865P0CJ78 1059 aaPredicted RBP16.86■□□□□ 0.29
RNF4-213ENST00000509388 MTMR1Q13613 665 aa16.86■□□□□ 0.29
RNF4-213ENST00000509388 FOXD4L5Q5VV16 416 aaPredicted RBP16.86■□□□□ 0.29
RNF4-213ENST00000509388 IQSEC1Q6DN90 963 aa16.86■□□□□ 0.29
RNF4-213ENST00000509388 SCFD2Q8WU76 684 aa16.86■□□□□ 0.29
RNF4-213ENST00000509388 FOXD4L4Q8WXT5 416 aaPredicted RBP16.86■□□□□ 0.29
RNF4-213ENST00000509388 GPRASP2Q96D09 838 aa16.86■□□□□ 0.29
RNF4-213ENST00000509388 JADE2Q9NQC1 790 aa16.86■□□□□ 0.29
RNF4-213ENST00000509388 UBIAD1Q9Y5Z9 338 aa16.86■□□□□ 0.29
RNF4-213ENST00000509388 MAFGO15525 162 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 FIBPO43427 364 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 ZSCAN22P10073 491 aaPredicted RBP16.85■□□□□ 0.29
RNF4-213ENST00000509388 TXNP10599 105 aaKnown RBP16.85■□□□□ 0.29
RNF4-213ENST00000509388 CYBAP13498 195 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 AKR1A1P14550 325 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 GCFC2P16383 781 aaKnown RBP16.85■□□□□ 0.29
RNF4-213ENST00000509388 CIITAP33076 1130 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 TRAPPC10P48553 1259 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 NUCB2P80303 420 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 SETQ01105 290 aaPredicted RBP16.85■□□□□ 0.29
RNF4-213ENST00000509388 TNFAIP2Q03169 654 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 CCDC144BQ3MJ40 725 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 PRR16Q569H4 304 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 RILPL1Q5EBL4 403 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 PLA2G4DQ86XP0 818 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 INPP4AQ96PE3 977 aaPredicted RBP16.85■□□□□ 0.29
RNF4-213ENST00000509388 WDR11Q9BZH6 1224 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 PDGFCQ9NRA1 345 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 DDX25Q9UHL0 483 aaKnown RBP16.85■□□□□ 0.29
RNF4-213ENST00000509388 DOCK3Q8IZD9 2030 aa16.85■□□□□ 0.29
RNF4-213ENST00000509388 RBBP6Q7Z6E9 1792 aaKnown RBP16.84■□□□□ 0.29
RNF4-213ENST00000509388 FAM86B1E9PN63 330 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 SEPT4O43236 478 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 FAM86B2P0C5J1 330 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 TGFB3P10600 412 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 ITGB5P18084 799 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 CCND3P30281 292 aaPredicted RBP16.84■□□□□ 0.29
RNF4-213ENST00000509388 ADCYAP1R1P41586 468 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 TTC38Q5R3I4 469 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 MAP3K21Q5TCX8 1036 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 PPP4R3AQ6IN85 833 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 TAPT1Q6NXT6 567 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 MOXD1Q6UVY6 613 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 NIPA1Q7RTP0 329 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 TRPV1Q8NER1 839 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 CYP2W1Q8TAV3 490 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 CRYGNQ8WXF5 182 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 ARMC5Q96C12 935 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 KATNBL1Q9H079 304 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 RNF208Q9H0X6 261 aa16.84■□□□□ 0.29
RNF4-213ENST00000509388 ZNFX1Q9P2E3 1918 aaKnown RBP16.84■□□□□ 0.29
RNF4-213ENST00000509388 CYP3A7-CYP3A51PA0A087WV96 503 aa16.83■□□□□ 0.28
RNF4-213ENST00000509388 SPATA31C2B4DYI2 1134 aa16.83■□□□□ 0.28
RNF4-213ENST00000509388 MEIS1O00470 390 aa16.83■□□□□ 0.28
RNF4-213ENST00000509388 MSCO60682 206 aa16.83■□□□□ 0.28
RNF4-213ENST00000509388 TDP2O95551 362 aa16.83■□□□□ 0.28
RNF4-213ENST00000509388 RARBP10826 455 aa16.83■□□□□ 0.28
RNF4-213ENST00000509388 CYP3A7P24462 503 aa16.83■□□□□ 0.28
RNF4-213ENST00000509388 ICAM3P32942 547 aa16.83■□□□□ 0.28
RNF4-213ENST00000509388 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.83■□□□□ 0.28
RNF4-213ENST00000509388 KCNH7Q9NS40 1196 aa16.83■□□□□ 0.28
RNF4-213ENST00000509388 PKD2L1Q9P0L9 805 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms