RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 CYP2C18P33260 490 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 TMEM63BQ5T3F8 832 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 STOX1Q6ZVD7 989 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 ZNF654Q8IZM8 581 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 SLC17A8Q8NDX2 589 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 IGDCC4Q8TDY8 1250 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 CUL5Q93034 780 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 RRP36Q96EU6 259 aaKnown RBP12.05□□□□□ -0.48
NR1I3-222ENST00000506018 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.05□□□□□ -0.48
NR1I3-222ENST00000506018 KATNAL1Q9BW62 490 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 LSG1Q9H089 658 aaKnown RBP12.05□□□□□ -0.48
NR1I3-222ENST00000506018 COL20A1Q9P218 1284 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 GRIN2DO15399 1336 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 SLC27A2O14975 620 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 FGBP02675 491 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 PFKMP08237 780 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 MYCLP12524 364 aaPredicted RBP12.05□□□□□ -0.48
NR1I3-222ENST00000506018 SMARCA1P28370 1054 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 CCND2P30279 289 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 EPHB4P54760 987 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 LAMC2Q13753 1193 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 DGKDQ16760 1214 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 NBPF20Q3BBV1 942 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 CCDC62Q6P9F0 684 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 SYNE3Q6ZMZ3 975 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 IFNLR1Q8IU57 520 aaPredicted RBP12.05□□□□□ -0.48
NR1I3-222ENST00000506018 CCDC155Q8N6L0 562 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 RETREG2Q8NC44 543 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 COPS5Q92905 334 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 FAM161BQ96MY7 647 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 NOC4LQ9BVI4 516 aaKnown RBP12.05□□□□□ -0.48
NR1I3-222ENST00000506018 TRPV6Q9H1D0 765 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 LY9Q9HBG7 655 aa12.05□□□□□ -0.48
NR1I3-222ENST00000506018 TRIP12Q14669 1992 aaPredicted RBP12.04□□□□□ -0.48
NR1I3-222ENST00000506018 STAM2O75886 525 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 ARIH2O95376 493 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 MMP3P08254 477 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 TGFB3P10600 412 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 HOXA13P31271 388 aaPredicted RBP12.04□□□□□ -0.48
NR1I3-222ENST00000506018 LIFRP42702 1097 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 CCL23P55773 120 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 ANTXR2P58335 489 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 CHMP4BP1P59074 171 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 BFSP2Q13515 415 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 PGM5Q15124 567 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 LY6KQ17RY6 165 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 GNPTABQ3T906 1256 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 TMEM240Q5SV17 173 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 CREB3L3Q68CJ9 461 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 ZNF365Q70YC5 407 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 FCHSD1Q86WN1 690 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 DHX37Q8IY37 1157 aaKnown RBP12.04□□□□□ -0.48
NR1I3-222ENST00000506018 AFG1LQ8WV93 481 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 EMID1Q96A84 441 aaPredicted RBP12.04□□□□□ -0.48
NR1I3-222ENST00000506018 PDCD2LQ9BRP1 358 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 SPZ1Q9BXG8 430 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 SEMA6BQ9H3T3 888 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 TRMT13Q9NUP7 481 aaKnown RBP12.04□□□□□ -0.48
NR1I3-222ENST00000506018 DDX41Q9UJV9 622 aaKnown RBP12.04□□□□□ -0.48
NR1I3-222ENST00000506018 SLC12A7Q9Y666 1083 aa12.04□□□□□ -0.48
NR1I3-222ENST00000506018 MYO9BQ13459 2157 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 TANC1Q9C0D5 1861 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 SH2B2O14492 632 aaPredicted RBP12.03□□□□□ -0.48
NR1I3-222ENST00000506018 CYTH3O43739 400 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 PPP1R11O60927 126 aaPredicted RBP12.03□□□□□ -0.48
NR1I3-222ENST00000506018 ACRP10323 421 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 ACTN1P12814 892 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 DNAJB2P25686 324 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 RFC2P35250 354 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 ARHGAP1Q07960 439 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 NECTIN1Q15223 517 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 VSIG10LQ86VR7 867 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 SMARCC2Q8TAQ2 1214 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 PIBF1Q8WXW3 757 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 HERVK_113Q902F9 699 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 SENP2Q9HC62 589 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 MSRAQ9UJ68 235 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 TAF6LQ9Y6J9 622 aa12.03□□□□□ -0.48
NR1I3-222ENST00000506018 LAMA2P24043 3122 aaKnown RBP12.02□□□□□ -0.48
NR1I3-222ENST00000506018 KAT6AQ92794 2004 aa12.02□□□□□ -0.49
NR1I3-222ENST00000506018 GBF1Q92538 1859 aa12.02□□□□□ -0.49
NR1I3-222ENST00000506018 OPLAHO14841 1288 aa12.02□□□□□ -0.49
NR1I3-222ENST00000506018 CDC45O75419 566 aa12.02□□□□□ -0.49
NR1I3-222ENST00000506018 CYP2C9P11712 490 aa12.02□□□□□ -0.49
NR1I3-222ENST00000506018 KRT32Q14532 448 aa12.02□□□□□ -0.49
NR1I3-222ENST00000506018 RAB30Q15771 203 aa12.02□□□□□ -0.49
NR1I3-222ENST00000506018 PTGISQ16647 500 aa12.02□□□□□ -0.49
NR1I3-222ENST00000506018 C7orf31Q8N865 590 aa12.02□□□□□ -0.49
NR1I3-222ENST00000506018 PPTC7Q8NI37 304 aa12.02□□□□□ -0.49
NR1I3-222ENST00000506018 GUCD1Q96NT3 240 aa12.02□□□□□ -0.49
NR1I3-222ENST00000506018 MLXIPQ9HAP2 919 aa12.02□□□□□ -0.49
NR1I3-222ENST00000506018 UMODL1Q5DID0 1318 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 SCN5AQ14524 2016 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 ZBBXA8MT70 800 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 PPFIA4O75335 1185 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 XRRA1Q6P2D8 792 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 C16orf59Q7L2K0 433 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 OTOP2Q7RTS6 562 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 SESTD1Q86VW0 696 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 CAGE1Q8TC20 777 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms