RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 DDX41Q9UJV9 622 aaKnown RBP14□□□□□ -0.17
PDLIM7-214ENST00000505746 MRVI1Q9Y6F6 885 aa14□□□□□ -0.17
PDLIM7-214ENST00000505746 LCTP09848 1927 aa14□□□□□ -0.17
PDLIM7-214ENST00000505746 LAMA4Q16363 1823 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 GCOM1H8Y6P7 765 aaPredicted RBP13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 OPLAHO14841 1288 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 PPP1R11O60927 126 aaPredicted RBP13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 IQCF3P0C7M6 154 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 POLR2MP0CAP2 368 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 MYCLP12524 364 aaPredicted RBP13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 PTGISQ16647 500 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 TMEM67Q5HYA8 995 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 DEFB128Q7Z7B8 93 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 DHX37Q8IY37 1157 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 CCDC155Q8N6L0 562 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 MAP4K1Q92918 833 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 PIGSQ96S52 555 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 PDCD2LQ9BRP1 358 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 COL25A1Q9BXS0 654 aaPredicted RBP13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 NKX2-4Q9H2Z4 354 aa13.99□□□□□ -0.17
PDLIM7-214ENST00000505746 PNMA6FA0A0J9YX94 578 aa13.98□□□□□ -0.17
PDLIM7-214ENST00000505746 ATP2A2P16615 1042 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-214ENST00000505746 TROAPQ12815 778 aa13.98□□□□□ -0.17
PDLIM7-214ENST00000505746 VSIG10LQ86VR7 867 aa13.98□□□□□ -0.17
PDLIM7-214ENST00000505746 PPTC7Q8NI37 304 aa13.98□□□□□ -0.17
PDLIM7-214ENST00000505746 CAGE1Q8TC20 777 aa13.98□□□□□ -0.17
PDLIM7-214ENST00000505746 PPP1R13LQ8WUF5 828 aa13.98□□□□□ -0.17
PDLIM7-214ENST00000505746 VWCEQ96DN2 955 aa13.98□□□□□ -0.17
PDLIM7-214ENST00000505746 KATNAL1Q9BW62 490 aa13.98□□□□□ -0.17
PDLIM7-214ENST00000505746 FTOQ9C0B1 505 aaKnown RBP eCLIP13.98□□□□□ -0.17
PDLIM7-214ENST00000505746 PRDM12Q9H4Q4 367 aa13.98□□□□□ -0.17
PDLIM7-214ENST00000505746 PCDHA11Q9Y5I1 949 aa13.98□□□□□ -0.17
PDLIM7-214ENST00000505746 PPFIA4O75335 1185 aa13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 TGFB3P10600 412 aa13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 HOXA13P31271 388 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 PGM5Q15124 567 aa13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 C7orf31Q8N865 590 aa13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 IGDCC4Q8TDY8 1250 aa13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 AFAP1L1Q8TED9 768 aa13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 KAT2BQ92831 832 aa13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 MAP3K14Q99558 947 aa13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 MTA3Q9BTC8 594 aa13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 SENP2Q9HC62 589 aa13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 YBX2Q9Y2T7 364 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 RBM8AQ9Y5S9 174 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-214ENST00000505746 CYTH3O43739 400 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 PARNO95453 639 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 CCND2P30279 289 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 KIF5BP33176 963 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 PSEN2P49810 448 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 RABGGTBP53611 331 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 SLC35G1Q2M3R5 365 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 MYSM1Q5VVJ2 828 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 PPP2R2DQ66LE6 453 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 GDF6Q6KF10 455 aaPredicted RBP13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 CASC1Q6TDU7 716 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 FCHSD1Q86WN1 690 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 MB21D2Q8IYB1 491 aaPredicted RBP13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 TMTC2Q8N394 836 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 CTCFLQ8NI51 663 aaPredicted RBP13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 PHOSPHO2Q8TCD6 241 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 SLC9A7Q96T83 725 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 GTF2IRD1Q9UHL9 959 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 TAF6LQ9Y6J9 622 aa13.96□□□□□ -0.17
PDLIM7-214ENST00000505746 STAM2O75886 525 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 RGS20O76081 388 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 DDAH1O94760 285 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 BAIAP3O94812 1187 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 F2P00734 622 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 ANTXR2P58335 489 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 MFSD10Q14728 455 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 KIAA0753Q2KHM9 967 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 CELF3Q5SZQ8 465 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 SYMPKQ92797 1274 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 SPATA33Q96N06 139 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 LZTS2Q9BRK4 669 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 ALG1Q9BT22 464 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 MLXIPQ9HAP2 919 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 HDAC6Q9UBN7 1215 aa13.95□□□□□ -0.18
PDLIM7-214ENST00000505746 A0A0C4DFX4 3053 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 KIF28PB7ZC32 967 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 HAS3O00219 553 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 GGPS1O95749 300 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 SELPP16109 830 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 IGFBP4P22692 258 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 SMARCA1P28370 1054 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 MCM5P33992 734 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 GNAQP50148 359 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 GNPTABQ3T906 1256 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 NFXL1Q6ZNB6 911 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 LRRC8DQ7L1W4 858 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 ZNF654Q8IZM8 581 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 USP38Q8NB14 1042 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 PIBF1Q8WXW3 757 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 PPM1EQ8WY54 764 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 RRP36Q96EU6 259 aaKnown RBP13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 CTAGE1Q96RT6 745 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 SPZ1Q9BXG8 430 aa13.94□□□□□ -0.18
PDLIM7-214ENST00000505746 LY9Q9HBG7 655 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms