RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	GNPTAB	Q3T906	1256 aa		18.98	■□□□□ 0.63
DDR1-256	ENST00000505066	CASC1	Q6TDU7	716 aa		18.98	■□□□□ 0.63
DDR1-256	ENST00000505066	PHOSPHO2	Q8TCD6	241 aa		18.98	■□□□□ 0.63
DDR1-256	ENST00000505066	CUL5	Q93034	780 aa		18.98	■□□□□ 0.63
DDR1-256	ENST00000505066	ZBED2	Q9BTP6	218 aa		18.98	■□□□□ 0.63
DDR1-256	ENST00000505066	BAIAP3	O94812	1187 aa		18.97	■□□□□ 0.63
DDR1-256	ENST00000505066	IQCF3	P0C7M6	154 aa		18.97	■□□□□ 0.63
DDR1-256	ENST00000505066	TJAP1	Q5JTD0	557 aa		18.97	■□□□□ 0.63
DDR1-256	ENST00000505066	CCDC62	Q6P9F0	684 aa		18.97	■□□□□ 0.63
DDR1-256	ENST00000505066	PPTC7	Q8NI37	304 aa		18.97	■□□□□ 0.63
DDR1-256	ENST00000505066	CTCFL	Q8NI51	663 aa	Predicted RBP	18.97	■□□□□ 0.63
DDR1-256	ENST00000505066	TBC1D5	Q92609	795 aa		18.97	■□□□□ 0.63
DDR1-256	ENST00000505066	MLXIP	Q9HAP2	919 aa		18.97	■□□□□ 0.63
DDR1-256	ENST00000505066	SEC63	Q9UGP8	760 aa	Known RBP	18.97	■□□□□ 0.63
DDR1-256	ENST00000505066	DNAH12	Q6ZR08	3092 aa		18.97	■□□□□ 0.63
DDR1-256	ENST00000505066	TGFB3	P10600	412 aa		18.96	■□□□□ 0.63
DDR1-256	ENST00000505066	NFXL1	Q6ZNB6	911 aa		18.96	■□□□□ 0.63
DDR1-256	ENST00000505066	TMTC2	Q8N394	836 aa		18.96	■□□□□ 0.63
DDR1-256	ENST00000505066	ATXN2L	Q8WWM7	1075 aa	Known RBP	18.96	■□□□□ 0.63
DDR1-256	ENST00000505066	EMID1	Q96A84	441 aa	Predicted RBP	18.96	■□□□□ 0.63
DDR1-256	ENST00000505066	SPATA33	Q96N06	139 aa		18.96	■□□□□ 0.63
DDR1-256	ENST00000505066	ALG1	Q9BT22	464 aa		18.96	■□□□□ 0.63
DDR1-256	ENST00000505066	THEG	Q9P2T0	379 aa		18.96	■□□□□ 0.63
DDR1-256	ENST00000505066	DDX41	Q9UJV9	622 aa	Known RBP	18.96	■□□□□ 0.63
DDR1-256	ENST00000505066	MCM3AP	O60318	1980 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	PNMA6F	A0A0J9YX94	578 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	NOP56	O00567	594 aa	Known RBP	18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	EFCAB14	O75071	495 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	PPFIA4	O75335	1185 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	ARIH2	O95376	493 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	SELP	P16109	830 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	CHML	P26374	656 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	PSEN2	P49810	448 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	HSD17B4	P51659	736 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	RABGGTB	P53611	331 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	ARHGAP1	Q07960	439 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	GRM4	Q14833	912 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	SKIV2L	Q15477	1246 aa	Known RBP	18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	AAK1	Q2M2I8	961 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	SESTD1	Q86VW0	696 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	FCHSD1	Q86WN1	690 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	MICALL1	Q8N3F8	863 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	STAG2	Q8N3U4	1231 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	RRP36	Q96EU6	259 aa	Known RBP	18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	MAD2L2	Q9UI95	211 aa		18.95	■□□□□ 0.62
DDR1-256	ENST00000505066	PALM3	A6NDB9	673 aa	Predicted RBP	18.94	■□□□□ 0.62
DDR1-256	ENST00000505066	STAM2	O75886	525 aa		18.94	■□□□□ 0.62
DDR1-256	ENST00000505066	GNAQ	P50148	359 aa		18.94	■□□□□ 0.62
DDR1-256	ENST00000505066	MRPS5	P82675	430 aa	Known RBP	18.94	■□□□□ 0.62
DDR1-256	ENST00000505066	MFSD10	Q14728	455 aa		18.94	■□□□□ 0.62
DDR1-256	ENST00000505066	SEC23A	Q15436	765 aa		18.94	■□□□□ 0.62
DDR1-256	ENST00000505066	CCDC85B	Q15834	202 aa	Predicted RBP	18.94	■□□□□ 0.62
DDR1-256	ENST00000505066	KIAA0753	Q2KHM9	967 aa		18.94	■□□□□ 0.62
DDR1-256	ENST00000505066	LRRC8D	Q7L1W4	858 aa		18.94	■□□□□ 0.62
DDR1-256	ENST00000505066	LZTS2	Q9BRK4	669 aa		18.94	■□□□□ 0.62
DDR1-256	ENST00000505066	PDCD2L	Q9BRP1	358 aa		18.94	■□□□□ 0.62
DDR1-256	ENST00000505066	COL20A1	Q9P218	1284 aa		18.94	■□□□□ 0.62
DDR1-256	ENST00000505066	CCDC69	A6NI79	296 aa		18.93	■□□□□ 0.62
DDR1-256	ENST00000505066		E7EWF7	191 aa		18.93	■□□□□ 0.62
DDR1-256	ENST00000505066	TLL1	O43897	1013 aa		18.93	■□□□□ 0.62
DDR1-256	ENST00000505066	HOXA13	P31271	388 aa	Predicted RBP	18.93	■□□□□ 0.62
DDR1-256	ENST00000505066	STOX1	Q6ZVD7	989 aa		18.93	■□□□□ 0.62
DDR1-256	ENST00000505066	CYB5R4	Q7L1T6	521 aa		18.93	■□□□□ 0.62
DDR1-256	ENST00000505066	SMARCC2	Q8TAQ2	1214 aa		18.93	■□□□□ 0.62
DDR1-256	ENST00000505066	PIGS	Q96S52	555 aa		18.93	■□□□□ 0.62
DDR1-256	ENST00000505066	YBX2	Q9Y2T7	364 aa	Known RBP	18.93	■□□□□ 0.62
DDR1-256	ENST00000505066	GGPS1	O95749	300 aa		18.92	■□□□□ 0.62
DDR1-256	ENST00000505066	CYP21A2	P08686	494 aa		18.92	■□□□□ 0.62
DDR1-256	ENST00000505066	GNAT1	P11488	350 aa		18.92	■□□□□ 0.62
DDR1-256	ENST00000505066	GSPT1	P15170	499 aa	Known RBP	18.92	■□□□□ 0.62
DDR1-256	ENST00000505066	PTK7	Q13308	1070 aa		18.92	■□□□□ 0.62
DDR1-256	ENST00000505066	IKBKE	Q14164	716 aa		18.92	■□□□□ 0.62
DDR1-256	ENST00000505066	PGM5	Q15124	567 aa		18.92	■□□□□ 0.62
DDR1-256	ENST00000505066	SYNE3	Q6ZMZ3	975 aa		18.92	■□□□□ 0.62
DDR1-256	ENST00000505066	VSIG10L	Q86VR7	867 aa		18.92	■□□□□ 0.62
DDR1-256	ENST00000505066	GTF2IRD1	Q9UHL9	959 aa		18.92	■□□□□ 0.62
DDR1-256	ENST00000505066	CA3	P07451	260 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	CALM1	P0DP23	149 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	CALM2	P0DP24	149 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	CALM3	P0DP25	149 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	NEDD9	Q14511	834 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	CELF3	Q5SZQ8	465 aa	Known RBP	18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	GDF6	Q6KF10	455 aa	Predicted RBP	18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	CNKSR3	Q6P9H4	555 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	HERC6	Q8IVU3	1022 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	PPP1R13L	Q8WUF5	828 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	PIBF1	Q8WXW3	757 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	MTMR8	Q96EF0	704 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	RIOX1	Q9H6W3	641 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	HDAC6	Q9UBN7	1215 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	ZNF215	Q9UL58	517 aa	Predicted RBP	18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	EMSY	Q7Z589	1322 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	CUL9	Q8IWT3	2517 aa		18.91	■□□□□ 0.62
DDR1-256	ENST00000505066	ABHD14A-ACY1	A0A1B0GW23	586 aa		18.9	■□□□□ 0.62
DDR1-256	ENST00000505066	SGSM2	O43147	1006 aa		18.9	■□□□□ 0.62
DDR1-256	ENST00000505066	DDAH1	O94760	285 aa		18.9	■□□□□ 0.62
DDR1-256	ENST00000505066	ZNF286B	P0CG31	522 aa		18.9	■□□□□ 0.62
DDR1-256	ENST00000505066	PDE4A	P27815	886 aa		18.9	■□□□□ 0.62
DDR1-256	ENST00000505066	MCM5	P33992	734 aa		18.9	■□□□□ 0.62
DDR1-256	ENST00000505066	GHRHR	Q02643	423 aa		18.9	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms